Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060130.seq
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.41 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.9  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   6.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   8.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   8.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 110  VSSLDSPDINNSMINV*AERNRELHIHSQLCLDGHKSTD 226
            V+S +   IN+S  +  A+RN +    S +  DGH ST+
Sbjct: 961  VNSTNVTSINSSSSSSTADRNGDTKSRSPVVADGHNSTN 999


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 142 FNDKCLGGEESRVAHP*STLPRRPQVDRLNINKSRVLWISV 264
           FN   LG   +      S+LP R  V  +++N S   ++ V
Sbjct: 156 FNQPALGWSPAAAVRSDSSLPMRHYVPHISLNSSSSCFLDV 196


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 199 LPRRPQVDRLNINKSRVLWISVFV*YEF 282
           LP RP++DRLN      +++   + Y F
Sbjct: 469 LPSRPKLDRLNAPYMAAMFLQRNIPYTF 496


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 657 ARYNKLLHCQPKSSIIGSST 598
           A++NK  H  P SS IGS T
Sbjct: 303 AKFNKPAHQTPTSSGIGSRT 322


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/61 (21%), Positives = 26/61 (42%)
 Frame = -1

Query: 411 NFLQVIQTRN*LINS*KNRVIKLSRHXNINIHNTLTFKINVHLKFILNKNGNPQNTRLIN 232
           + + + Q RN      +   +   R    N HN     +N H+KF  + +  P+   L++
Sbjct: 475 HLVPIRQRRNQYNQHVREGSVYFQRSSTFNHHNGHQRNLNPHIKFSNSHSNLPEEISLMS 534

Query: 231 V 229
           +
Sbjct: 535 L 535


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/61 (21%), Positives = 26/61 (42%)
 Frame = -1

Query: 411 NFLQVIQTRN*LINS*KNRVIKLSRHXNINIHNTLTFKINVHLKFILNKNGNPQNTRLIN 232
           + + + Q RN      +   +   R    N HN     +N H+KF  + +  P+   L++
Sbjct: 476 HLVPIRQRRNQYNQHVREGSVYFQRSSTFNHHNGHQRNLNPHIKFSNSHSNLPEEISLMS 535

Query: 231 V 229
           +
Sbjct: 536 L 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,430
Number of Sequences: 2352
Number of extensions: 11991
Number of successful extensions: 93
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)