BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060128.seq
(685 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426176-1|ABO26419.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426174-1|ABO26417.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426169-1|ABO26412.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426168-1|ABO26411.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426167-1|ABO26410.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426164-1|ABO26407.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426162-1|ABO26405.1| 155|Anopheles gambiae unknown protein. 25 1.7
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 25 1.7
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 1.7
EF426166-1|ABO26409.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426165-1|ABO26408.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 25 2.9
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 2.9
Z71480-1|CAA96104.1| 209|Anopheles gambiae GSTD2 protein protein. 24 5.1
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 23 6.8
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 9.0
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426176-1|ABO26419.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426174-1|ABO26417.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426169-1|ABO26412.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426168-1|ABO26411.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426167-1|ABO26410.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426164-1|ABO26407.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426162-1|ABO26405.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 1.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 165 PGST-PRCPSGTPSMSPQKGSPASQPYTLNR 76
PG+ PR +G P +KG PA P N+
Sbjct: 195 PGNPGPRGYAGIPGTKGEKGEPARHPENYNK 225
>EF426166-1|ABO26409.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.0 bits (52), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQNALPSEIRIVDCDLCTTELC 130
>EF426165-1|ABO26408.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.0 bits (52), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQNALPSEIRIVDCDLCTTELC 130
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 24.6 bits (51), Expect = 2.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 69 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 161
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLMQSALPSEIRIVDCDLCTTELC 130
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 24.6 bits (51), Expect = 2.9
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 616 PHSAGVTSLHNRLTVPSQSNRQTVTLFPHNTRQSRSFVLKGSNY 485
P +++NR VPS + +Q H+ +Q + V K + Y
Sbjct: 760 PQVISYNNMNNRRIVPSPNQQQQQQHHHHHLQQQQQIVGKNTLY 803
>Z71480-1|CAA96104.1| 209|Anopheles gambiae GSTD2 protein protein.
Length = 209
Score = 23.8 bits (49), Expect = 5.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 222 DGALLLSPSRKHFLFICVEPG 160
DG+L+LS SR +++C + G
Sbjct: 58 DGSLVLSESRAALIYLCDQYG 78
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 23.4 bits (48), Expect = 6.8
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = +2
Query: 395 ICFHILNFCLI 427
ICF+ILN+C++
Sbjct: 541 ICFNILNWCML 551
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.0 bits (47), Expect = 9.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 200 LHGNTSCLFVLSLAVLRAVQAELHQCHHRRDLQLH 96
LH SC + L A+LH C +R + LH
Sbjct: 788 LHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLH 822
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,211
Number of Sequences: 2352
Number of extensions: 18023
Number of successful extensions: 49
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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