Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060126.seq
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p pro...    62   5e-10
AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.     62   5e-10
AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA...    62   5e-10
BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p pro...    30   3.4  
AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-P...    30   3.4  
AE014134-1505|AAO41167.1|  837|Drosophila melanogaster CG13388-P...    29   6.0  

>AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p
           protein.
          Length = 304

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 30/99 (30%), Positives = 46/99 (46%)
 Frame = +3

Query: 351 CLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYASDAYAS 530
           C  + C AGR+C++++     C      P    +RR+VCTN NETW SDC VY    +  
Sbjct: 85  CETMSCGAGRICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCD 143

Query: 531 TTLISAVVRNTTTFQIEYYXNVAEKCLTALKSEMSDFPR 647
           +        +     I+YY     +  +    ++ DFPR
Sbjct: 144 SGEPGCTNPDNAHMHIDYY-GACHEPRSCEGEDLKDFPR 181


>AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.
          Length = 304

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 30/99 (30%), Positives = 46/99 (46%)
 Frame = +3

Query: 351 CLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYASDAYAS 530
           C  + C AGR+C++++     C      P    +RR+VCTN NETW SDC VY    +  
Sbjct: 85  CETMSCGAGRICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCD 143

Query: 531 TTLISAVVRNTTTFQIEYYXNVAEKCLTALKSEMSDFPR 647
           +        +     I+YY     +  +    ++ DFPR
Sbjct: 144 SGEPGCTNPDNAHMHIDYY-GACHEPRSCEGEDLKDFPR 181


>AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA
           protein.
          Length = 304

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 30/99 (30%), Positives = 46/99 (46%)
 Frame = +3

Query: 351 CLKVHCSAGRVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYASDAYAS 530
           C  + C AGR+C++++     C      P    +RR+VCTN NETW SDC VY    +  
Sbjct: 85  CETMSCGAGRICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCD 143

Query: 531 TTLISAVVRNTTTFQIEYYXNVAEKCLTALKSEMSDFPR 647
           +        +     I+YY     +  +    ++ DFPR
Sbjct: 144 SGEPGCTNPDNAHMHIDYY-GACHEPRSCEGEDLKDFPR 181


>BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p
           protein.
          Length = 148

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +3

Query: 378 RVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYASDAYASTTLISAVVR 557
           R+C++N HGD      R  P ++  RR   T+  E  + D E   S+  A T++I+    
Sbjct: 76  RICKLNAHGDCAPNLPRCQPKQKLLRRQKSTSELEN-RVDIE-EESEYLARTSIIAMAPE 133

Query: 558 N 560
           N
Sbjct: 134 N 134


>AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-PA
           protein.
          Length = 165

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +3

Query: 378 RVCEINEHGDAMCTASRTVPTRQTSRRMVCTNFNETWQSDCEVYASDAYASTTLISAVVR 557
           R+C++N HGD      R  P ++  RR   T+  E  + D E   S+  A T++I+    
Sbjct: 93  RICKLNAHGDCAPNLPRCQPKQKLLRRQKSTSELEN-RVDIE-EESEYLARTSIIAMAPE 150

Query: 558 N 560
           N
Sbjct: 151 N 151


>AE014134-1505|AAO41167.1|  837|Drosophila melanogaster CG13388-PD,
           isoform D protein.
          Length = 837

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -3

Query: 201 VPAAELLRRWTFSSRGADPAVPTPHTLASAVQMTAITRANARRPFI 64
           V AAEL++  T  ++  +  +PT HT AS+  +  +T + A    +
Sbjct: 402 VAAAELVQTQTILTKTTNTILPTSHTQASSEVIETVTPSQAEEEVV 447


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,371,743
Number of Sequences: 53049
Number of extensions: 600950
Number of successful extensions: 1535
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1532
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)