Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060125.seq
(716 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.3
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.7
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.7
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.7
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.7
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.7
AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochr... 22 5.7
AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochr... 22 5.7
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 128 RLCFFKKREVIVRRHNNKIY*NKTIHT 48
R+CFFK + H ++ +T+HT
Sbjct: 152 RMCFFKSSKKPAFSHFLIVFFTETLHT 178
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 128 RLCFFKKREVIVRRHNNKIY*NKTIHT 48
R+CFFK + H ++ +T+HT
Sbjct: 152 RMCFFKSSKKPAFSHFLIVFFTETLHT 178
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 128 RLCFFKKREVIVRRHNNKIY*NKTIHT 48
R+CFFK + H ++ +T+HT
Sbjct: 152 RMCFFKSSKKPAFSHFLIVFFTETLHT 178
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 128 RLCFFKKREVIVRRHNNKIY*NKTIHT 48
R+CFFK + H ++ +T+HT
Sbjct: 152 RMCFFKSSKKPAFSHFLIVFFTETLHT 178
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +2
Query: 161 STIIYICCP 187
+TI+Y CCP
Sbjct: 187 NTIVYACCP 195
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +2
Query: 161 STIIYICCP 187
+TI+Y CCP
Sbjct: 187 NTIVYACCP 195
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +2
Query: 161 STIIYICCP 187
+TI+Y CCP
Sbjct: 187 NTIVYACCP 195
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +2
Query: 161 STIIYICCP 187
+TI+Y CCP
Sbjct: 187 NTIVYACCP 195
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +2
Query: 161 STIIYICCP 187
+TI+Y CCP
Sbjct: 187 NTIVYACCP 195
>AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q2 protein.
Length = 126
Score = 21.8 bits (44), Expect = 5.7
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = -1
Query: 404 QFIIQNVXREHPHSFL 357
+F+ +NV + HP+++L
Sbjct: 111 RFLPENVQKRHPYAYL 126
>AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q1 protein.
Length = 126
Score = 21.8 bits (44), Expect = 5.7
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = -1
Query: 404 QFIIQNVXREHPHSFL 357
+F+ +NV + HP+++L
Sbjct: 111 RFLPENVQKRHPYAYL 126
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,365
Number of Sequences: 336
Number of extensions: 2886
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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