Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060124.seq
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 2e-49
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 2e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0) 192 2e-49
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 192 2e-49
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 2e-49
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 78 6e-15
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 75 5e-14
SB_54| Best HMM Match : Actin (HMM E-Value=0) 73 3e-13
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 54 8e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 51 1e-06
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 48 9e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.092
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 32 0.37
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 32 0.37
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 32 0.37
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.65
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 31 0.86
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 1.5
SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5) 30 1.5
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62) 30 2.0
SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019) 30 2.0
SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 29 2.6
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 29 3.5
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_55265| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 28 6.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 28 6.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 192 bits (469), Expect = 2e-49
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = +2
Query: 242 GKAPHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 421
G+ HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 422 VAPEEHPVLLTEAPLNPKANREKMTQIMFKHSTRP 526
VAPEEHPVLLTEAPLNPKANREKMTQIMF+ P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 131
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/49 (81%), Positives = 44/49 (89%), Gaps = 2/49 (4%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYR--RIPH 648
+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY +PH
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 174
Score = 82.2 bits (194), Expect = 4e-16
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +3
Query: 135 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 40
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 192 bits (469), Expect = 2e-49
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = +2
Query: 242 GKAPHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 421
G+ HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 422 VAPEEHPVLLTEAPLNPKANREKMTQIMFKHSTRP 526
VAPEEHPVLLTEAPLNPKANREKMTQIMF+ P
Sbjct: 96 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 130
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/49 (81%), Positives = 44/49 (89%), Gaps = 2/49 (4%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYR--RIPH 648
+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY +PH
Sbjct: 125 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 173
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +3
Query: 141 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 39
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 192 bits (469), Expect = 2e-49
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = +2
Query: 242 GKAPHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 421
G+ HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 422 VAPEEHPVLLTEAPLNPKANREKMTQIMFKHSTRP 526
VAPEEHPVLLTEAPLNPKANREKMTQIMF+ P
Sbjct: 96 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 130
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/49 (81%), Positives = 44/49 (89%), Gaps = 2/49 (4%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYR--RIPH 648
+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY +PH
Sbjct: 125 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 173
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = +3
Query: 141 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 39
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 192 bits (469), Expect = 2e-49
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = +2
Query: 242 GKAPHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 421
G+ HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 422 VAPEEHPVLLTEAPLNPKANREKMTQIMFKHSTRP 526
VAPEEHPVLLTEAPLNPKANREKMTQIMF+ P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 131
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +3
Query: 135 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 40
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/49 (81%), Positives = 44/49 (89%), Gaps = 2/49 (4%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYR--RIPH 648
+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY +PH
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 174
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 192 bits (469), Expect = 2e-49
Identities = 87/95 (91%), Positives = 89/95 (93%)
Frame = +2
Query: 242 GKAPHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 421
G+ HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 422 VAPEEHPVLLTEAPLNPKANREKMTQIMFKHSTRP 526
VAPEEHPVLLTEAPLNPKANREKMTQIMF+ P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 131
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIY 633
+TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIY 167
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +3
Query: 135 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPR
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 40
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 108 bits (260), Expect = 4e-24
Identities = 49/55 (89%), Positives = 50/55 (90%)
Frame = +2
Query: 242 GKAPHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 406
G+ HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 85.4 bits (202), Expect = 4e-17
Identities = 42/57 (73%), Positives = 48/57 (84%), Gaps = 4/57 (7%)
Frame = +1
Query: 490 DDPDHV--QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYR--RIPH 648
DD + + +TFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIY +PH
Sbjct: 80 DDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPH 136
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/38 (92%), Positives = 38/38 (100%)
Frame = +3
Query: 141 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPR
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 39
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +2
Query: 284 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 460
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 461 PLNPKANREKMTQIMFKH 514
PLNP NREKM ++MF++
Sbjct: 113 PLNPMKNREKMIEVMFEN 130
Score = 58.0 bits (134), Expect = 7e-09
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYR--RIPH 648
+ + +Y+AIQAVL+LYA G TG+V+DSGDGV H P+Y +PH
Sbjct: 129 ENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPH 177
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 153 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRIRA*WSVWD 281
+ +V DNG+G K G+AG + P +FPS+VGRP IR+ V D
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGD 49
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 78.2 bits (184), Expect = 6e-15
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYR--RIPH 648
+ FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGV H VPIY +PH
Sbjct: 4 EAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPH 52
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/49 (65%), Positives = 43/49 (87%), Gaps = 2/49 (4%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIYR--RIPH 648
+TFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV H+VPIY +PH
Sbjct: 151 ETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPH 199
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2
Query: 434 EHPVLLTEAPLNPKANREKMTQIMFK 511
+HPVLLTEAPLNP+ NREK ++ F+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFE 151
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIY 633
++FN P MYVA+QAV++LYASGRTTG V D GDGV HTVP+Y
Sbjct: 2170 ESFNVPCMYVAVQAVMALYASGRTTGTVFDCGDGVSHTVPVY 2211
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +2
Query: 386 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFKHSTRPPC 532
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MF+ S PC
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFE-SFNVPC 2176
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = +3
Query: 159 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
+V+DNGSG CKAG + D++PR VFP+IVGRPR
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPR 2128
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 272 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 451
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 31.5 bits (68), Expect = 0.65
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 580 TGIVLDSGDGVXHTVPI 630
TG V+DSGDGV H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +3
Query: 144 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
E LV+D GS M K GFAGDDAP+ VFP IVGRPR
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPR 1390
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +2
Query: 344 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFKHSTR 523
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MF+
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 524 P 526
P
Sbjct: 63 P 63
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 508 QTFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVXHTVPIY 633
+ +N PA ++ +VL+ +A+GR+ G+V+DSG VP++
Sbjct: 58 EKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVH 99
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 129 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 254
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 544 QAVLSLYASGRTTGIVLDSGDGVXHTVPIY 633
Q LSLYASG T G+ L SG IY
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIY 796
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -1
Query: 254 AGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 141
A + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 2 ARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.092
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 293 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 415
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 147 EVAALVVDNGSGMCKAGFAGDDAPRAV 227
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 482 REKMTQIMFKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSXTPCPSTE 637
++ +++I+ + ST+ P T KP + RP+ P + P + P P TE
Sbjct: 244 QKSVSEILSQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 461 PLNPKANREKMTQIMFKHSTRPPCTSPSKPCSRCTRPVVPP 583
P PK + + + K R P++PCS CT+P +PP
Sbjct: 197 PFQPKPSLRLVCDFLVKDCIR---RYPTEPCSLCTKPALPP 234
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 511 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVXHTVPI 630
++ T A+ + S RT TG V+DSGDGV H +P+
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPV 78
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 335 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 487
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 232 GNTARGASSPAKPALHIPEPLSTT 161
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 232 GNTARGASSPAKPALHIPEPLSTT 161
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = +2
Query: 527 PCTSPSKPCSR----CTRPVVPPVSCWTPATVSXTPCPSTEGY 643
PCT PC+ CT P +TP+T TPC TE Y
Sbjct: 632 PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC--TERY 672
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Frame = +2
Query: 527 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSXTPCPSTEGYRTXPRH 661
P T PC + CT+ +P +TP T TPC T P H
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSH 892
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 527 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSXTPC 625
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 512 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSXTPC 625
H+T P P T PS P C + P C+T T+S PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 232 GNTARGASSPAKPALHIPEPLSTT 161
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +2
Query: 527 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSXTPC 625
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
>SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5)
Length = 554
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 226 CSPRSWEGPASGRDGRYGTEGLLCR 300
C+PR W P R+GR T L CR
Sbjct: 274 CAPRQWLEPTEKREGREVTNKLRCR 298
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 512 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSXTPCPSTEGYRTXP 655
HST ++PS P + CT P P P + TP+T S PST + P
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPSTP 111
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 509 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSXTPC-PSTEGYRTXP 655
K+ R ++PS PC+ T P P P + TP+T S TPC PST + P
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTP 51
>SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62)
Length = 331
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 425 APEEHPVLLTEAPLNPKANREKMTQIMFKHSTRPPCTSP 541
APE +P + + NP+ R+ +HS +PP T+P
Sbjct: 138 APEPNPHVDSATSRNPRGQRQSKKPRGQRHSKKPPWTAP 176
>SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019)
Length = 348
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 425 APEEHPVLLTEAPLNPKANREKMTQIMFKHSTRPPCTSP 541
APE +P + + NP+ R+ +HS +PP T+P
Sbjct: 295 APEPNPHVDSATSRNPRGQRQSKKPRGQRHSKKPPWTAP 333
>SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 193 PVSQEMMLLAPCSPRSWEGPASGRDGRYGTEGLLCR 300
P + + L A CSP +GP GRD RY + CR
Sbjct: 466 PQACRLTLAATCSPS--QGPCCGRDCRYVGNDISCR 499
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 515 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSXTPCPSTEGYRTXP 655
+T T+P+K S T+PV+ P TPA ++ P + RT P
Sbjct: 125 TTSTTATTPAKTTSATTKPVMTPT---TPAPMTLPPISPIDPPRTQP 168
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 533 TSPSKPCSRCTRPVVPPVSCWTPATVSXTPCPSTEGYRTXP 655
T+P+ P + T P P + TP T + TP P
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPP 170
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 217 LAPCSPRSWEGPASGRDGRYGTEGL 291
+A C R+++G SGR+ GT+G+
Sbjct: 6611 VAACDARNYDGKESGRESTEGTDGI 6635
>SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 279 PIPTITP*CGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLL 145
P P + P G FP + G +E H L C Y + LLP Q++
Sbjct: 92 PSPDVVPNAGQFPNAEG--QEVHFLCTGPMCRY-AEDLLPLLQIM 133
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 524 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSXTPCPST 634
PP P P + TRP VP +T TP P T
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPT 955
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 524 PPCTSPSKPCSRCTRPVVPPVSC 592
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_55265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 470 PKANREKMTQIMFKHSTRP-PCTSPSKPCSRCTRPVVP 580
P + + T+++ +H + PCTSPS+ TR V+P
Sbjct: 438 PCTSPSRTTRVITRHPVKYYPCTSPSRTTRVITRNVLP 475
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 521 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSXTPCPSTE 637
+PP T+PSK T P+ P++ TP T T +T+
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTK 417
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 232 GNTARGASSPAKPALHIPEPLSTT 161
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 308 PHLLHKSPSVPYRPSRPDAGPSHDRGEHGARSIISCETG 192
P +H P+VP P+ P A P H G G ++C G
Sbjct: 409 PIAVHVPPAVPQHPAPPPAVPQH-VGSPGFSVPLTCPVG 446
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 232 GNTARGASSPAKPALHIPEPLSTT 161
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 515 STRPPCTSPSKPCSRCTRPVVPP-VSCWTPATVSXTPCPSTEGYR 646
S PP SPS S RP PP VS P T + P T +R
Sbjct: 742 SKHPPTVSPSS-SSAPPRPSTPPSVSSAPPQTTNFCDTPGTRPWR 785
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,976,186
Number of Sequences: 59808
Number of extensions: 578028
Number of successful extensions: 2083
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2064
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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