Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060122.seq
(658 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 131 5e-31
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 125 4e-29
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 101 4e-22
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 91 9e-19
08_01_0397 - 3509186-3510291,3510322-3512335 87 1e-17
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 87 2e-17
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 85 6e-17
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 79 4e-15
03_05_0865 - 28365430-28367640 66 2e-11
02_01_0381 - 2764331-2764342,2768966-2769907 66 2e-11
06_03_1255 + 28780181-28781172,28782065-28782932 66 3e-11
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 60 2e-09
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 57 1e-08
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 56 2e-08
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 55 6e-08
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 54 1e-07
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 53 2e-07
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 53 2e-07
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 48 9e-06
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 47 2e-05
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 46 2e-05
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 46 2e-05
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 46 3e-05
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 45 5e-05
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 45 5e-05
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 43 2e-04
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 43 2e-04
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 43 2e-04
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 43 2e-04
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 42 4e-04
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 41 0.001
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 40 0.001
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 40 0.002
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 39 0.003
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 39 0.004
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 38 0.007
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 38 0.007
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 38 0.009
03_02_0189 - 6253659-6255380 37 0.012
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 37 0.012
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 37 0.012
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 37 0.016
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 37 0.016
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 31 1.1
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 30 1.9
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 28 7.5
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 28 7.5
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 7.5
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 27 9.9
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 131 bits (316), Expect = 5e-31
Identities = 55/111 (49%), Positives = 76/111 (68%)
Frame = +3
Query: 261 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 440
SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPDY Q +
Sbjct: 112 SLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAI 171
Query: 441 KTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHINNQP 593
G+ EPTPIQ+QGWP + ++++G+A T SGKTL+Y+LP +VH+ QP
Sbjct: 172 AKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQP 222
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 125 bits (301), Expect = 4e-29
Identities = 56/110 (50%), Positives = 74/110 (67%)
Frame = +3
Query: 264 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 443
L F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV Q +
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 444 TMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHINNQP 593
G+ EPTPIQ+QGWP + ++L+G+A T SGKTLAY+LPAIVH+N QP
Sbjct: 108 KAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQP 157
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 101 bits (243), Expect = 4e-22
Identities = 45/115 (39%), Positives = 70/115 (60%)
Frame = +3
Query: 255 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 434
++ +PFNK+FY+ P+V S EV +Y + + VSG +V PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 435 GVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHINNQPPI 599
+ GY++PT IQ Q P ++++G+A T SGKT A++LP IVHI +QP +
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPEL 287
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 90.6 bits (215), Expect = 9e-19
Identities = 41/114 (35%), Positives = 66/114 (57%)
Frame = +3
Query: 258 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 437
+ QPF KN Y + + EV YR N E+ V G +V PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 438 VKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHINNQPPI 599
+K +G+++P PIQAQ P ++ +G+A T SGKTLA++LP + H+ +QPP+
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPV 353
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/114 (35%), Positives = 65/114 (57%)
Frame = +3
Query: 258 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 437
+ QPF KNFY + K + EV YR E+ V G +V PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 438 VKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHINNQPPI 599
+K +G+++P IQAQ P ++ +G+A T SGKTLA++LP + H+ +QP +
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAV 492
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +3
Query: 333 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKN 512
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WP + ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 513 LVGVAXTASGKTLAYILPAIVHI 581
+V +A T SGKTL Y+LP +HI
Sbjct: 190 VVAIAKTGSGKTLGYLLPGFMHI 212
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 84.6 bits (200), Expect = 6e-17
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +3
Query: 261 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 437
S++P ++ F P+ P++ + YR +HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 438 VKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHI 581
+ G+ PTPIQAQ WP + +++V +A T SGKTL Y++PA +H+
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHL 666
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +3
Query: 333 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKN 512
E YR HE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WP + ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 513 LVGVAXTASGKTLAYILPAIV 575
+V VA T SGKTL Y++P +
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFI 240
>03_05_0865 - 28365430-28367640
Length = 736
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/87 (33%), Positives = 51/87 (58%)
Frame = +3
Query: 339 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLV 518
+R + ++ G +V P++ + E+ + + V+ GYKEP+PIQ P ++++
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 519 GVAXTASGKTLAYILPAIVHINNQPPI 599
G+A T SGKT A++LP + +I PPI
Sbjct: 357 GIAETGSGKTAAFVLPMLSYITRLPPI 383
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +3
Query: 231 EHASPRLGSVSLQPFNKN--FYDP------HPTVLKRSPY-EVEEYRNNHEVTVSGVEVH 383
EH S R +S++ K + DP P L+R P + +E R + V G +V
Sbjct: 119 EHLSDRKTLMSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVP 178
Query: 384 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYIL 563
P + F + P+ + + ++ G +PTPIQ QG P ++++G+A T SGKTL ++L
Sbjct: 179 PPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVL 238
Query: 564 PAIV 575
P I+
Sbjct: 239 PLIM 242
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +3
Query: 300 PTVLKRSPYE-VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 476
P L+R P + R + + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 477 AQGWPDSYVWKNLVGVAXTASGKTLAYILPAIV 575
QG P + ++++G+A T SGKTL ++LP I+
Sbjct: 201 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIM 233
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/87 (31%), Positives = 49/87 (56%)
Frame = +3
Query: 327 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVW 506
++ R+ ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P S
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 507 KNLVGVAXTASGKTLAYILPAIVHINN 587
++L+ A T SGKT ++++P I H ++
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSH 246
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +3
Query: 357 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTA 536
V SG +V P+ F E + D + + ++ Y +PTP+Q P S ++L+ A T
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 284
Query: 537 SGKTLAYILPAIVHI-NNQPPIRXR 608
SGKT A+ P I I +++PP R R
Sbjct: 285 SGKTAAFCFPIISGIMSSRPPQRPR 309
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +3
Query: 357 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTA 536
V VSG +V P FE A + V + V GY+ PTP+Q P + ++L+ A T
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
Query: 537 SGKTLAYILPAI 572
SGKT A+ LP +
Sbjct: 132 SGKTAAFCLPVV 143
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 357 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTA 536
V SG +V P F E + D + + ++ Y +PTP+Q P S ++L+ A T
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 370
Query: 537 SGKTLAYILPAIVHI-NNQPPIRXR 608
SGKT A+ P I I ++PP R R
Sbjct: 371 SGKTAAFCFPIISGIMRSRPPPRSR 395
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/68 (35%), Positives = 39/68 (57%)
Frame = +3
Query: 387 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILP 566
P+ F P V K G++ P+PIQA WP ++ +G+A T SGKT+A+ +P
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVP 149
Query: 567 AIVHINNQ 590
A++H+ +
Sbjct: 150 ALMHVRRK 157
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/80 (35%), Positives = 38/80 (47%)
Frame = +3
Query: 357 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTA 536
V SG EV P+ F E + + ++ Y PTP+Q P S ++L+ A T
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
Query: 537 SGKTLAYILPAIVHINNQPP 596
SGKT A+ P I I PP
Sbjct: 203 SGKTAAFCFPIISGIMRGPP 222
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +3
Query: 342 RNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWK 509
R ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q P +
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 510 NLVGVAXTASGKTLAYILPAIVHI 581
A T SGKTLA++ P ++ I
Sbjct: 185 ECFACAPTGSGKTLAFLFPILMKI 208
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAI 572
FE + V +GV+ GY+ PTPIQ + P ++ +A T SGKT A+++P I
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMI 85
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +3
Query: 438 VKTMGYKEPTPIQAQGWPDS-YVWKNLVGVAXTASGKTLAYILPAI 572
V+ +G+KEPTPIQ +P + + K+++G A T SGKTLA+ LP +
Sbjct: 157 VRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPIL 202
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
F E N + + + +GY++PTPIQA P + +++ G A T SGKT A+ LP +
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLER 255
Query: 579 INNQP 593
+ +P
Sbjct: 256 LLFRP 260
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +3
Query: 387 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILP 566
P + E P+ V MG+KEPT IQA+ P + ++L+G+ T SGKT A+ LP
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALP 98
Query: 567 AI 572
I
Sbjct: 99 II 100
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/59 (32%), Positives = 35/59 (59%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIV 575
F+E + + G++ GY E + IQ P + ++++G A T SGKTLA+++P ++
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLM 140
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAI 572
F E + + ++ M Y T IQA+ P K+++G A T SGKTLA+++PAI
Sbjct: 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAI 155
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 390 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPA 569
+ FEE + V + MG +PT IQ G P ++V + T SGKTLAY+LP
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPL 168
Query: 570 I-VHINN 587
+ + I N
Sbjct: 169 VQIEIEN 175
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAI 572
F+E + +++ ++ G + TPIQ + P K++V A T SGKT AY+LP +
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPML 142
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +3
Query: 327 EVEEYRNNHEVTVSGVEVHNPIQYFEEANF--PDYVQQGVKTMGYKEPTPIQAQGWPDSY 500
E EE + E+T SG E +P ANF + +++ +K+ G K PIQA +
Sbjct: 82 EEEEDDDEGELTASGDE--DPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVL 139
Query: 501 VWKNLVGVAXTASGKTLAYILPAIVHINN 587
+LVG A T GKTLA++LP + + N
Sbjct: 140 DGHDLVGRARTGQGKTLAFVLPILESLVN 168
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 447 MGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAI 572
MG+K PT IQA+ P + ++++GV T SGKT A+ LP I
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPII 42
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAI 572
F + D ++ M Y T IQA+ P + +++ A T SGKTLA+++PAI
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAI 145
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +3
Query: 447 MGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHI 581
MG++ PT IQAQ P + ++++ A T +GKTLAY+ P IVH+
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHL 85
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
F E ++ ++G + PT +Q + P + ++++G+A T SGKT A+ LP +
Sbjct: 79 FAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHR 138
Query: 579 INNQP 593
+ P
Sbjct: 139 LGEDP 143
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 417 PDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYIL 563
P++V Q + +GY PT +Q Q P ++ + A T SGKTLAY+L
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLL 97
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
F++ + VK GY+ T +Q P K+++ A T +GKT+A++LPAI
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEV 67
Query: 579 INNQPPIR 602
++ P R
Sbjct: 68 LSALPNSR 75
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +3
Query: 426 VQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHINNQP 593
V + +K G++ TP+QA P K++ A T SGKTLA+++P + + +P
Sbjct: 34 VVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRP 89
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
FE+ + G+ G++ P+PIQ + P + +++ A +GKT A+ +PA+
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 195
Query: 579 INNQ 590
I+ +
Sbjct: 196 IDQE 199
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
FE+ + G+ G++ P+PIQ + P + +++ A +GKT A+ +PA+
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
Query: 579 IN 584
I+
Sbjct: 209 ID 210
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
FE+ + G+ G++ P+PIQ + P + +++ A +GKT A+ +PA+
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185
Query: 579 IN 584
I+
Sbjct: 186 ID 187
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 498 YVWKNLVGVAXTASGKTLAYILPAIVHINNQPPI 599
Y+ K+++ A T +GKT+A++LPAI ++ PPI
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPI 523
>03_02_0189 - 6253659-6255380
Length = 573
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
FEE P + + G PT +Q+ P + V + T SGKTLAY+LP +
Sbjct: 133 FEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSE 192
Query: 579 I 581
I
Sbjct: 193 I 193
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
F+E D + +++ G+ P+ IQA + K+ + + SGKTLAY+ P + +
Sbjct: 242 FKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQN 301
Query: 579 INNQ 590
+ +
Sbjct: 302 LRKE 305
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 432 QGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVHINNQP 593
+ +K GY++ T +Q P ++++ A T +GKT+A++LPAI ++ P
Sbjct: 87 KAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP 140
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
FEE + + GY + T +Q P K+++ A T +GK+ A++LPAI
Sbjct: 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIES 403
Query: 579 INN 587
+ N
Sbjct: 404 VLN 406
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAIVH 578
FEE P + + G PT +Q+ P + V + T SGKTLAY+LP +
Sbjct: 595 FEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSE 654
Query: 579 I 581
I
Sbjct: 655 I 655
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 399 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAYILPAI 572
+E D + + G P+ +QA P +++ A T SGKT Y++P I
Sbjct: 84 WESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLI 141
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 417 PDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKNLVGVAXTASGKTLAY---ILPAIVHINN 587
P V Q + + G + PIQ + K++VG A T +GKTLA+ IL AI+ N
Sbjct: 107 PKIVSQ-LASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNE 165
Query: 588 Q 590
+
Sbjct: 166 K 166
>08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 235 MRRPDWDLFHSNLSTKTFMIHILQFSKDHH 324
MR PD D S K F IH+ S DHH
Sbjct: 1226 MRSPDDDKPTSWSDQKVFEIHVYPSSNDHH 1255
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 276 NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 398
NK+ Y+ ++ R+P + E+Y NN ++ EV P+++
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLEF 177
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 318 SPYEVEEYRNNHEVTVSGVEVHN 386
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 438 VKTMGYKEPTPIQAQGWPDSY----VWKNLVGVAXTASGKTLAYILPAI 572
++ MG + P+Q W ++ +++ + T SGKTLAY LP +
Sbjct: 48 LQRMGIESFFPVQVAAWLETIGPGAFERDICINSPTGSGKTLAYALPIV 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,207,009
Number of Sequences: 37544
Number of extensions: 306972
Number of successful extensions: 815
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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