Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060121.seq
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK130893-1|BAC85454.1|  695|Homo sapiens protein ( Homo sapiens ...    32   2.2  
AB046791-1|BAB13397.2| 1779|Homo sapiens KIAA1571 protein protein.     32   2.2  

>AK130893-1|BAC85454.1|  695|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27383 fis, clone UBA08549. ).
          Length = 695

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +1

Query: 34  PLPGIANKLMKDNLQVNV--PDNLIMNDKIYEKQDSETIYKQLLQLQ 168
           PL  + NK+   N ++N+   +++ ++DK Y   DSE IY   + LQ
Sbjct: 147 PLQSVTNKIPGANKEINLLREEHVCLDDKGYVPSDSEIIYVSNIPLQ 193


>AB046791-1|BAB13397.2| 1779|Homo sapiens KIAA1571 protein protein.
          Length = 1779

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +1

Query: 34  PLPGIANKLMKDNLQVNV--PDNLIMNDKIYEKQDSETIYKQLLQLQ 168
           PL  + NK+   N ++N+   +++ ++DK Y   DSE IY   + LQ
Sbjct: 717 PLQSVTNKIPGANKEINLLREEHVCLDDKGYVPSDSEIIYVSNIPLQ 763


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,653,833
Number of Sequences: 237096
Number of extensions: 1351383
Number of successful extensions: 3076
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3076
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)