Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060121.seq
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001799-1|AAN71554.1|  202|Drosophila melanogaster RH27395p pro...    32   0.84 
BT001567-1|AAN71322.1|  188|Drosophila melanogaster RE18604p pro...    32   0.84 
AE013599-2698|AAF57690.1|  355|Drosophila melanogaster CG5174-PB...    32   0.84 
AE013599-2697|AAM68457.1|   99|Drosophila melanogaster CG5174-PK...    32   0.84 
AE013599-2696|AAM68456.1|  188|Drosophila melanogaster CG5174-PH...    32   0.84 
AE013599-2695|AAM68455.1|  208|Drosophila melanogaster CG5174-PA...    32   0.84 
AE013599-2694|AAM68454.1|  201|Drosophila melanogaster CG5174-PI...    32   0.84 
AE013599-2693|AAM68453.1|  166|Drosophila melanogaster CG5174-PG...    32   0.84 
AE013599-2692|AAM68452.1|  186|Drosophila melanogaster CG5174-PJ...    32   0.84 
AY061481-1|AAL29029.1|  208|Drosophila melanogaster LD44733p pro...    31   1.5  
AE014297-4074|AAF56671.1|  866|Drosophila melanogaster CG5882-PA...    29   4.5  

>BT001799-1|AAN71554.1|  202|Drosophila melanogaster RH27395p
           protein.
          Length = 202

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 31  NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 80


>BT001567-1|AAN71322.1|  188|Drosophila melanogaster RE18604p
           protein.
          Length = 188

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 17  NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 66


>AE013599-2698|AAF57690.1|  355|Drosophila melanogaster CG5174-PB,
           isoform B protein.
          Length = 355

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 164 NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 213


>AE013599-2697|AAM68457.1|   99|Drosophila melanogaster CG5174-PK,
           isoform K protein.
          Length = 99

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 17  NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 66


>AE013599-2696|AAM68456.1|  188|Drosophila melanogaster CG5174-PH,
           isoform H protein.
          Length = 188

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 17  NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 66


>AE013599-2695|AAM68455.1|  208|Drosophila melanogaster CG5174-PA,
           isoform A protein.
          Length = 208

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 17  NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 66


>AE013599-2694|AAM68454.1|  201|Drosophila melanogaster CG5174-PI,
           isoform I protein.
          Length = 201

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 30  NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 79


>AE013599-2693|AAM68453.1|  166|Drosophila melanogaster CG5174-PG,
           isoform G protein.
          Length = 166

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 17  NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 66


>AE013599-2692|AAM68452.1|  186|Drosophila melanogaster CG5174-PJ,
           isoform J protein.
          Length = 186

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L  +  +E+ + EW++++  +  +++ LRT L  K R
Sbjct: 17  NSVASAEIAAEFAALS-VEEKEQRRAEWSQELARVEEEINTLRTVLASKTR 66


>AY061481-1|AAL29029.1|  208|Drosophila melanogaster LD44733p
           protein.
          Length = 208

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = +3

Query: 252 NQLKSIQVAADSARLEKMNVQEKLQM--EWTEKINAINNQMHDLRTQLDFKVR 404
           N + S ++AA+ A L   +V+EK Q   EW++++  +  +++ LRT L  K R
Sbjct: 17  NSVASAEIAAEFAAL---SVEEKKQRRAEWSQELARVEEEINTLRTVLASKTR 66


>AE014297-4074|AAF56671.1|  866|Drosophila melanogaster CG5882-PA
           protein.
          Length = 866

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = +3

Query: 255 QLKSIQVAADSARLEKMNVQEKLQMEWTEKINAINNQMH 371
           +LK +   A+  + EK    +++Q  W +K++A+ N+MH
Sbjct: 423 KLKKLNEDANKLKKEKTKKLDEIQ-HWIDKLDALQNEMH 460


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,764,915
Number of Sequences: 53049
Number of extensions: 430375
Number of successful extensions: 1069
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)