Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060117.seq
(559 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 107 4e-24
07_03_0104 + 13434954-13435145,13436220-13436288,13436386-134365... 84 6e-17
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211... 72 3e-13
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 71 5e-13
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170... 69 3e-12
07_03_0108 + 13481249-13481464,13484556-13484693,13485320-134853... 63 2e-10
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 32 0.36
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 30 1.1
08_02_1223 - 25381462-25381575,25381822-25382061,25382570-253827... 29 1.9
02_04_0554 - 23831212-23832163,23833173-23833438,23833694-238337... 29 2.5
01_02_0037 + 10476208-10476876 29 2.5
06_01_0752 + 5632809-5633690,5635372-5635509,5635711-5636016 29 3.3
03_04_0051 + 16852980-16852991,16853952-16854033,16854108-16854763 29 3.3
12_01_0893 + 8650967-8651311 28 4.4
02_04_0561 + 23879976-23879981,23880531-23882558,23882687-238827... 28 4.4
02_04_0533 + 23719353-23719910,23720012-23720418,23720690-23721023 28 4.4
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 28 5.8
01_01_0120 + 1119319-1119447,1120565-1120632,1121682-1121928,112... 28 5.8
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913... 27 7.7
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610... 27 7.7
06_03_0305 + 19388745-19388963,19389069-19389209,19389799-193898... 27 7.7
04_04_0500 - 25677767-25680850 27 7.7
04_03_0090 - 11037111-11037568,11039606-11039671,11040524-110407... 27 7.7
03_06_0194 + 32249846-32250562 27 7.7
>03_02_0168 +
6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 107 bits (258), Expect = 4e-24
Identities = 48/100 (48%), Positives = 65/100 (65%)
Frame = +1
Query: 256 GFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLXXDGTTVLIRDANRKRYALLD 435
GFF PE +L+ RWYQ AF PFFR H+H +TKRREPWL + T L+R+A RY+LL
Sbjct: 623 GFFGNPEPDLLVRWYQVGAFYPFFRGHAHHDTKRREPWLFGERRTALMREAIHMRYSLLP 682
Query: 436 XWYTLXYEHTVDGLTXMRPLFQXYLDXPVTYXIDDQYLLG 555
+YTL E +V G+ MRPL+ + D TY + +++G
Sbjct: 683 YYYTLFREASVTGVPVMRPLWLEFPDDKETYNNGEAFMVG 722
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +2
Query: 8 EHRHVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAXFAGTQRYSAVWTGDNTAEWSFL 187
EHR +HN YG + AT GLL R +G RPF+L+RA FAG+QRY A+WTGDN+A+W L
Sbjct: 535 EHRELHNAYGYYFHMATADGLLKRGEGKDRPFVLSRAFFAGSQRYGAIWTGDNSADWDHL 594
Query: 188 AASVPMCLSLAIAGNSF 238
+S+PM L+L + G +F
Sbjct: 595 KSSIPMVLTLGLTGMTF 611
>07_03_0104 +
13434954-13435145,13436220-13436288,13436386-13436523,
13436612-13436729,13437214-13437296,13438305-13438400,
13438552-13438720,13438798-13438940,13439027-13439113,
13439197-13439382,13439956-13440123,13441028-13441148,
13441453-13441522,13441694-13441781,13441866-13442018
Length = 626
Score = 84.2 bits (199), Expect = 6e-17
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +2
Query: 11 HRHVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAXFAGTQRYSAVWTGDNTAEWSFLA 190
H + HN YG+ R+T G+ +A+ RPF+LTRA F G+QRY+A WTGDN + W L
Sbjct: 360 HSYYHNVYGMLMARSTYEGMA-KANTEKRPFVLTRAGFIGSQRYAATWTGDNLSNWEHLH 418
Query: 191 ASVPMCLSLAIAGNSFCGSDVED--SSSIPKL 280
SVPM L L ++G G D+ ++ PKL
Sbjct: 419 MSVPMVLQLGLSGQPLSGPDIGGFAGNATPKL 450
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/100 (31%), Positives = 41/100 (41%)
Frame = +1
Query: 256 GFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLXXDGTTVLIRDANRKRYALLD 435
GF +L RW A PF R H+ + EPW + + R A +RY LL
Sbjct: 441 GFAGNATPKLFGRWMGLGALFPFSRGHTETGSIDHEPWSFGEECEEVCRLALLRRYRLLP 500
Query: 436 XWYTLXYEHTVDGLTXMRPLFQXYLDXPVTYXIDDQYLLG 555
YTL Y + G P+F P I+ +LLG
Sbjct: 501 HIYTLFYFSHMKGTPVAAPVFFADPQDPELRKIETSFLLG 540
>06_03_1114 +
27719099-27719252,27719340-27719570,27720508-27721148,
27721225-27722124
Length = 641
Score = 72.1 bits (169), Expect = 3e-13
Identities = 45/100 (45%), Positives = 49/100 (49%)
Frame = +1
Query: 256 GFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLXXDGTTVLIRDANRKRYALLD 435
GF EL +RW Q AF PF R HS I T RRE +L + R A RY LL
Sbjct: 327 GFGGNTTEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLW-ESVARSARKALGLRYRLLP 385
Query: 436 XWYTLXYEHTVDGLTXMRPLFQXYLDXPVTYXIDDQYLLG 555
YTL YE G RPLF Y TY ID Q+LLG
Sbjct: 386 YLYTLMYEAHTTGAPIARPLFFSYPGDVATYGIDRQFLLG 425
Score = 64.5 bits (150), Expect = 5e-11
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2
Query: 23 HNEYGLWNLRATNTGLLDRADGVYRPFLLTRAXFAGTQRYSAVWTGDNTAEWSFLAASVP 202
HN +G RAT+ LL D RPF+L+R+ F G+ RY+A WTGDN A W L S+
Sbjct: 251 HNLFGFLEARATHDALL--RDTGRRPFVLSRSTFVGSGRYTAHWTGDNFATWDDLRYSIN 308
Query: 203 MCLSLAIAGNSFCGSDV 253
LS + G G+D+
Sbjct: 309 TMLSFGLFGIPMIGADI 325
>06_03_1108 -
27661916-27662812,27662889-27663529,27663613-27664592,
27664854-27664934,27668582-27668634,27669294-27669308,
27670069-27670296
Length = 964
Score = 71.3 bits (167), Expect = 5e-13
Identities = 45/100 (45%), Positives = 49/100 (49%)
Frame = +1
Query: 256 GFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLXXDGTTVLIRDANRKRYALLD 435
GF EL +RW Q AF PF R HS I T RRE +L + R A RY LL
Sbjct: 651 GFGGNTTEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLW-ESVARSARKALGLRYRLLP 709
Query: 436 XWYTLXYEHTVDGLTXMRPLFQXYLDXPVTYXIDDQYLLG 555
YTL YE G RPLF Y TY ID Q+LLG
Sbjct: 710 YLYTLMYEAHTTGAPIARPLFFSYPGDVETYGIDRQFLLG 749
Score = 64.9 bits (151), Expect = 4e-11
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2
Query: 23 HNEYGLWNLRATNTGLLDRADGVYRPFLLTRAXFAGTQRYSAVWTGDNTAEWSFLAASVP 202
HN +G RAT+ LL D RPF+L+R+ F G+ RY+A WTGDN A W L S+
Sbjct: 575 HNLFGFLEARATHDALL--RDTGRRPFVLSRSTFVGSGRYTAHWTGDNAATWEDLHYSIN 632
Query: 203 MCLSLAIAGNSFCGSDV 253
LS + G G+D+
Sbjct: 633 TMLSFGLFGIPMIGADI 649
>01_01_0195 +
1697447-1697691,1698150-1698808,1699754-1701570,
1701700-1701771
Length = 930
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/100 (36%), Positives = 51/100 (51%)
Frame = +1
Query: 256 GFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWLXXDGTTVLIRDANRKRYALLD 435
GF+ P EL RW + AF PF R H++ + R+E ++ + R+A RY LL
Sbjct: 604 GFYPQPTEELCNRWIELGAFYPFSRDHANFASPRQELYVW-ESVAKSARNALGMRYRLLP 662
Query: 436 XWYTLXYEHTVDGLTXMRPLFQXYLDXPVTYXIDDQYLLG 555
YTL Y+ + G RP+F + D Y + QYLLG
Sbjct: 663 YLYTLNYQAHLTGAPVARPVFFSFPDFTPCYGLSTQYLLG 702
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/79 (37%), Positives = 41/79 (51%)
Frame = +2
Query: 17 HVHNEYGLWNLRATNTGLLDRADGVYRPFLLTRAXFAGTQRYSAVWTGDNTAEWSFLAAS 196
+ H+ YG AT+ L G RPF+LTR+ F G+ Y+A WTGDN W L S
Sbjct: 526 NAHSLYGFSQAIATHQAL-QGLQGK-RPFILTRSTFVGSGAYAAHWTGDNKGTWENLRYS 583
Query: 197 VPMCLSLAIAGNSFCGSDV 253
+ L+ I G G+D+
Sbjct: 584 ISTMLNFGIFGMPMVGADI 602
>07_03_0108 +
13481249-13481464,13484556-13484693,13485320-13485388,
13485462-13485599,13485685-13485802,13486265-13486347,
13486921-13487013,13487801-13487969,13488056-13488129,
13488448-13488633,13490009-13490101,13490469-13490534,
13490618-13490785,13491199-13491319,13492072-13492141,
13492389-13492476,13492565-13492685,13492964-13493157,
13493239-13493347,13493488-13493643,13493858-13493957,
13494115-13494288,13494549-13494694,13494796-13494860,
13495013-13495018
Length = 986
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/68 (45%), Positives = 41/68 (60%)
Frame = +2
Query: 32 YGLWNLRATNTGLLDRADGVYRPFLLTRAXFAGTQRYSAVWTGDNTAEWSFLAASVPMCL 211
YG+ ++T G+ A+ RPF+LTRA F G QRY+A+WTGDN + W L S+ M L
Sbjct: 368 YGMLMAKSTYEGM-KLANPTKRPFVLTRAGFIGQQRYAAMWTGDNVSNWEHLHMSIAMVL 426
Query: 212 SLAIAGNS 235
L NS
Sbjct: 427 QLDFELNS 434
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/121 (28%), Positives = 48/121 (39%)
Frame = +1
Query: 193 FRADVLVTGNSREQFLRF*RXGFFKYPEAELMTRWYQAAAFQPFFRAHSHIETKRREPWL 372
F +++ G S + F GF +L RW A PF R HS + EPW
Sbjct: 474 FEKNIVDLGLSGQPFAGPDIGGFAGNATPKLFGRWMGVGALFPFSRGHSDKGSLDHEPWS 533
Query: 373 XXDGTTVLIRDANRKRYALLDXWYTLXYEHTVDGLTXMRPLFQXYLDXPVTYXIDDQYLL 552
+ + R A +RY LL YTL Y +G P++ I+ +LL
Sbjct: 534 FGEECEEVCRLALLRRYRLLPHIYTLFYLSHTNGTPVAAPVYFADPQDLELRKIETSFLL 593
Query: 553 G 555
G
Sbjct: 594 G 594
>01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 291 EVVPGGRVPAVLSGPLAHRDQAARALAXPGRHHRAHSGRQPQA 419
++VPG + + PL +DQ+ RA + GRH R+ + +P A
Sbjct: 1268 KIVPGNQS----ADPLTAKDQSVRAKSIEGRHERSEAAMKPDA 1306
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 37 AVEPARHQHGAAGPRRRR 90
A P RH+HG A PRRRR
Sbjct: 10 AATPRRHRHGPATPRRRR 27
>08_02_1223 -
25381462-25381575,25381822-25382061,25382570-25382707,
25383397-25383849,25384528-25385010
Length = 475
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 417 LAVGVPNEHGGAVXVQPGLAPLGLDVRVGPKERLE 313
L G P G + +QP A +GLD+R+ P E
Sbjct: 304 LKAGTPTPTGFVMNLQPSEAEIGLDIRLPPSVHTE 338
>02_04_0554 -
23831212-23832163,23833173-23833438,23833694-23833748,
23834384-23834436,23834512-23834588,23834730-23834862,
23834958-23835098,23835840-23835960,23836137-23836242,
23836523-23836592,23836716-23836885,23837253-23837277,
23837662-23837777,23838926-23839217
Length = 858
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -2
Query: 387 GAVXVQPGLAPLGLDVRVGPKERLERGRLVPPRHELSFGILEESSTSEPQKLFP 226
GAV +P P G D V PK++++ L+P R + ++T+ PQ P
Sbjct: 555 GAVVQEPLPLPEGGDHPVPPKKKIKVAPLLPERADQPVVTSNSATTTRPQLCAP 608
>01_02_0037 + 10476208-10476876
Length = 222
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 321 VLSGPLAHRDQAARALAXPGRHHRAH 398
+LSGP A RD AA AL G HH H
Sbjct: 12 LLSGPAASRDGAAAALL--GHHHHHH 35
>06_01_0752 + 5632809-5633690,5635372-5635509,5635711-5636016
Length = 441
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 423 VSLAVGVPNEHGGAVXVQPGLAPLGLDVRVGPKERLE 313
V + G P+ G + +QP A +G D R+ P E +E
Sbjct: 284 VYMKAGTPSPTGFVMNMQPSEAEVGFDFRLPPTEDVE 320
>03_04_0051 + 16852980-16852991,16853952-16854033,16854108-16854763
Length = 249
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 378 GRHHRAHSGRQPQAIRAARLXVHSXLRAHGGRAD 479
GRHH H R+P+ + + R G RA+
Sbjct: 134 GRHHHHHDNRKPKVVTTTNHAAGALARMEGRRAE 167
>12_01_0893 + 8650967-8651311
Length = 114
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 90 STDPSCSRGPXSQAPRDTLRYGQVTIRRSGRSLRLPCRCACHW 218
+T SCS S D +R +T+R ++ P RCAC W
Sbjct: 20 ATGTSCS---GSSTEVDIVRQALLTVRLVPVGVQAPWRCACWW 59
>02_04_0561 +
23879976-23879981,23880531-23882558,23882687-23882722,
23882826-23882939,23883158-23883226,23883311-23883445
Length = 795
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 294 PRHELSFGILEESSTSEPQKLFPAIASDKHIGTEAARNDHSAVLSP 157
PR+E F S+T+ P K+ + DK + E A DH+ +SP
Sbjct: 70 PRYEPKFRKRASSTTNCPAKIRVKLWGDKLLHVELAILDHNHPVSP 115
>02_04_0533 + 23719353-23719910,23720012-23720418,23720690-23721023
Length = 432
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 387 GAVXVQPGLAPLGLDVRVGPKERLERGRLVPPRHELSFGILEESSTSEPQKLFP 226
GAV +P P G D V PK+ +E L+ R + ++T+ PQ P
Sbjct: 97 GAVLQEPLPLPEGSDHPVSPKKTIEVASLLQERADQPVVTSNSATTTRPQLCAP 150
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 311 AAAWYHLVMSSASGYLKNPXRQNRRNCSRLLPVTSTSARKPQGTTT 174
AAAW+ +++SAS Y Q S L P STS P G T
Sbjct: 65 AAAWFDGLLASASPY----RAQVSGYFSSLFPANSTSPEPPGGAAT 106
>01_01_0120 +
1119319-1119447,1120565-1120632,1121682-1121928,
1122430-1122498,1122782-1122907,1123326-1123406,
1123484-1123561,1124084-1124319,1124399-1124545,
1124864-1125152,1125231-1125352,1125713-1125749
Length = 542
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 199 HGSRKERPLRRIVTCPYRRVSLGACEXGPREQEGSVDAVGAVQQ 68
H + R RR PY R G + PRE +G +DA Q
Sbjct: 80 HSGGRRRRHRRGSKGPYERGGDGEVDGSPREAKGCMDAAATDAQ 123
>06_03_1427 -
30090464-30090475,30090476-30090553,30090903-30091304,
30091372-30091446,30091536-30091691,30091821-30092012,
30093735-30093908,30094966-30095123,30096738-30096914,
30096996-30097035
Length = 487
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 342 HRDQAARALAXPGRHHRAHSGRQPQAI 422
H +Q+ RA + P HR GR+P A+
Sbjct: 66 HGEQSRRAASLPKPRHRGDLGRRPLAV 92
>06_03_1422 +
30058936-30058975,30059057-30059233,30060848-30061005,
30062063-30062236,30063959-30064150,30064280-30064435,
30064525-30064599,30064667-30065068,30065418-30065495,
30065840-30066173,30066275-30066339
Length = 616
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 342 HRDQAARALAXPGRHHRAHSGRQPQAI 422
H +Q+ RA + P HR GR+P A+
Sbjct: 66 HGEQSRRAASLPKPRHRGDLGRRPLAV 92
>06_03_0305 +
19388745-19388963,19389069-19389209,19389799-19389836,
19390161-19390227,19392057-19392467
Length = 291
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 230 SRLLPVTSTSARKPQGTTTPP 168
SRLLP +S+S+ P TT PP
Sbjct: 13 SRLLPPSSSSSSPPTPTTIPP 33
>04_04_0500 - 25677767-25680850
Length = 1027
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 49 ARHQHGAAGPRRRRLQTLPAHEGRVRRHPEILCG 150
ARH A+ PR R QT A GR+ R L G
Sbjct: 58 ARHPFDASPPRARHSQTCRALHGRILRGGSPLLG 91
>04_03_0090 -
11037111-11037568,11039606-11039671,11040524-11040724,
11041049-11041157
Length = 277
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -2
Query: 411 VGVPNEHGGAVXVQPGLA-PLGLDVRVGPKERLERGRLVPPRHELSFGILEESSTSEPQK 235
VGV + GG P GLD +GP+ER + ++ ++ S P+
Sbjct: 20 VGVDSTGGGLANGSPARGMSSGLDPEIGPEERKLGTVKSITKEAVNSDTIKRSRGRPPKI 79
Query: 234 LFPAIASDK 208
L P I S K
Sbjct: 80 LMPTIESTK 88
>03_06_0194 + 32249846-32250562
Length = 238
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -3
Query: 359 RRLVSMCEWARKNGWNAAAWYHLVMSSASGYLKNPXRQNR 240
RR +M W + GW W H++ +SA + + R R
Sbjct: 191 RRGSTMPFWGGREGWERELWLHVLDASAQRWGQAAGRHGR 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,815,093
Number of Sequences: 37544
Number of extensions: 337625
Number of successful extensions: 1246
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -