Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060116.seq
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    25   1.6  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    25   2.2  
AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    23   8.8  

>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 195 TYTFK*VVLYKSIFSHLCYILSNHWLAIFLEV 100
           TY +   +++ SIF+ +C+ +S  WL + L +
Sbjct: 124 TYGWAWYIMFHSIFAQICHTIS-IWLTVTLAI 154


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 6   HMVEFGVISSFSHFNGMHFVCLR 74
           H V+FG+     +F+  H VCL+
Sbjct: 117 HCVQFGLGECCENFSNRHLVCLQ 139


>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 454 NNDCIAVGTSQDAECSFX*LGRRDSRN 534
           ++DC A+ T  D+ C F  L  R  RN
Sbjct: 172 SSDCQALKTKLDSGCPFFLLMGRGPRN 198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,414
Number of Sequences: 2352
Number of extensions: 13088
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)