Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060114.seq
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089582-1|AAL90320.1|  304|Drosophila melanogaster RE11615p pro...    29   5.4  
AE014297-4808|AAF57197.2|  304|Drosophila melanogaster CG2126-PA...    29   5.4  
AY071361-1|AAL48983.1|  521|Drosophila melanogaster RE39556p pro...    28   9.4  
AE014297-1601|AAF54879.2|  521|Drosophila melanogaster CG7091-PA...    28   9.4  

>AY089582-1|AAL90320.1|  304|Drosophila melanogaster RE11615p
           protein.
          Length = 304

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = -2

Query: 430 VEACDGNC*WRFPLGEPLWRLGGWCWRECRLN**KPC*AQKPGTS*LCWLFMS*AWNLPI 251
           +E C G    R PLG   W   G C R  R+N    C   +   S   WL++     LP+
Sbjct: 7   LERCPGAYCGRSPLGNNSWSSCGVCPRGSRVNQSYACSPCRDELSTYSWLYLGFMTMLPL 66


>AE014297-4808|AAF57197.2|  304|Drosophila melanogaster CG2126-PA
           protein.
          Length = 304

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = -2

Query: 430 VEACDGNC*WRFPLGEPLWRLGGWCWRECRLN**KPC*AQKPGTS*LCWLFMS*AWNLPI 251
           +E C G    R PLG   W   G C R  R+N    C   +   S   WL++     LP+
Sbjct: 7   LERCPGAYCGRSPLGNNSWSSCGVCPRGSRVNQSYACSPCRDELSTYSWLYLGFMTMLPL 66


>AY071361-1|AAL48983.1|  521|Drosophila melanogaster RE39556p
           protein.
          Length = 521

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -1

Query: 347 VSTKLVKAMLSAEARDKLTLLVVYVMSLEFTDMG 246
           ++T L+  ++ A   DK+ +LV++   +  TDMG
Sbjct: 390 LTTSLIGVIILANCDDKILVLVMFAFMMATTDMG 423


>AE014297-1601|AAF54879.2|  521|Drosophila melanogaster CG7091-PA
           protein.
          Length = 521

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -1

Query: 347 VSTKLVKAMLSAEARDKLTLLVVYVMSLEFTDMG 246
           ++T L+  ++ A   DK+ +LV++   +  TDMG
Sbjct: 390 LTTSLIGVIILANCDDKILVLVMFAFMMATTDMG 423


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,912,986
Number of Sequences: 53049
Number of extensions: 481191
Number of successful extensions: 988
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)