Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060113.seq
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 427 YHLAIIYSCXPGN 465
           YHLAI++SC   N
Sbjct: 252 YHLAILWSCTSTN 264


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 499 CNWVQVALLPESSPAXM 449
           C W Q  L+P+ +P  M
Sbjct: 580 CGWPQHMLIPKGTPEGM 596


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 7   RCDSLFITQKKTIHHTKVFIERYNRV 84
           +CD + IT+ +  +H+KV I    R+
Sbjct: 206 QCDFVAITKLEQWNHSKVHIREDKRL 231


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 15  FFVYHPKKNHSSHESLH 65
           FFV H   N+S+ + LH
Sbjct: 223 FFVSHKYTNYSAVQDLH 239


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 15  FFVYHPKKNHSSHESLH 65
           FFV H   N+S+ + LH
Sbjct: 230 FFVSHKYTNYSAVQDLH 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,126
Number of Sequences: 336
Number of extensions: 3108
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)