Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060113.seq
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z84485-2|CAI21669.1| 1205|Homo sapiens bromodomain and PHD finge...    30   8.3  
U83908-1|AAB42218.1|  458|Homo sapiens nuclear antigen H731 prot...    30   8.3  
BC117387-1|AAI17388.1|  935|Homo sapiens BRPF3 protein protein.        30   8.3  
BC031049-1|AAH31049.1|  469|Homo sapiens programmed cell death 4...    30   8.3  
BC026104-1|AAH26104.1|  469|Homo sapiens programmed cell death 4...    30   8.3  
BC015036-1|AAH15036.1|  201|Homo sapiens PDCD4 protein protein.        30   8.3  
AL158163-5|CAH72815.1|  469|Homo sapiens programmed cell death 4...    30   8.3  
AL158163-4|CAH72814.1|  231|Homo sapiens programmed cell death 4...    30   8.3  
AL136368-4|CAI40095.1|  469|Homo sapiens programmed cell death 4...    30   8.3  
AL136368-3|CAI40094.1|  231|Homo sapiens programmed cell death 4...    30   8.3  
AK223623-1|BAD97343.1|  469|Homo sapiens programmed cell death 4...    30   8.3  
AK074362-1|BAB85060.1|  424|Homo sapiens protein ( Homo sapiens ...    30   8.3  
AB033112-1|BAA86600.1| 1214|Homo sapiens KIAA1286 protein protein.     30   8.3  

>Z84485-2|CAI21669.1| 1205|Homo sapiens bromodomain and PHD finger
           containing, 3 protein.
          Length = 1205

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -1

Query: 173 SEAMRSTSIAATVRFIL*NMDFNTVKQKLCTRLYRSMKTF 54
           +E +  + +   + FI   MDF+T+++KL + LYR+++ F
Sbjct: 615 AEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEF 654


>U83908-1|AAB42218.1|  458|Homo sapiens nuclear antigen H731
           protein.
          Length = 458

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 91  RRSRSGKGRGLPKKG 105


>BC117387-1|AAI17388.1|  935|Homo sapiens BRPF3 protein protein.
          Length = 935

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -1

Query: 173 SEAMRSTSIAATVRFIL*NMDFNTVKQKLCTRLYRSMKTF 54
           +E +  + +   + FI   MDF+T+++KL + LYR+++ F
Sbjct: 615 AEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEF 654


>BC031049-1|AAH31049.1|  469|Homo sapiens programmed cell death 4
           (neoplastic transformation inhibitor) protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 102 RRSRSGKGRGLPKKG 116


>BC026104-1|AAH26104.1|  469|Homo sapiens programmed cell death 4
           (neoplastic transformation inhibitor) protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 102 RRSRSGKGRGLPKKG 116


>BC015036-1|AAH15036.1|  201|Homo sapiens PDCD4 protein protein.
          Length = 201

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 102 RRSRSGKGRGLPKKG 116


>AL158163-5|CAH72815.1|  469|Homo sapiens programmed cell death 4
           (neoplastic transformation inhibitor) protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 102 RRSRSGKGRGLPKKG 116


>AL158163-4|CAH72814.1|  231|Homo sapiens programmed cell death 4
           (neoplastic transformation inhibitor) protein.
          Length = 231

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 88  RRSRSGKGRGLPKKG 102


>AL136368-4|CAI40095.1|  469|Homo sapiens programmed cell death 4
           (neoplastic transformation inhibitor) protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 102 RRSRSGKGRGLPKKG 116


>AL136368-3|CAI40094.1|  231|Homo sapiens programmed cell death 4
           (neoplastic transformation inhibitor) protein.
          Length = 231

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 88  RRSRSGKGRGLPKKG 102


>AK223623-1|BAD97343.1|  469|Homo sapiens programmed cell death 4
           isoform 1 variant protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 348 RRPRNGHGRGLPKKG 392
           RR R+G GRGLPKKG
Sbjct: 102 RRSRSGKGRGLPKKG 116


>AK074362-1|BAB85060.1|  424|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23782 fis, clone HEP20947. ).
          Length = 424

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -1

Query: 173 SEAMRSTSIAATVRFIL*NMDFNTVKQKLCTRLYRSMKTF 54
           +E +  + +   + FI   MDF+T+++KL + LYR+++ F
Sbjct: 29  AEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEF 68


>AB033112-1|BAA86600.1| 1214|Homo sapiens KIAA1286 protein protein.
          Length = 1214

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -1

Query: 173 SEAMRSTSIAATVRFIL*NMDFNTVKQKLCTRLYRSMKTF 54
           +E +  + +   + FI   MDF+T+++KL + LYR+++ F
Sbjct: 624 AEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEF 663


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,847,478
Number of Sequences: 237096
Number of extensions: 1988711
Number of successful extensions: 8447
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8447
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)