Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060111.seq
(693 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 26 0.98
DQ986315-1|ABK59975.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980210-1|ABL09378.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980209-1|ABL09377.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980208-1|ABL09376.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980207-1|ABL09375.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980206-1|ABL09374.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980205-1|ABL09373.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980204-1|ABL09372.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980203-1|ABL09371.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980202-1|ABL09370.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980201-1|ABL09369.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980200-1|ABL09368.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ980199-1|ABL09367.1| 504|Anopheles gambiae catalase protein. 23 9.1
DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein. 23 9.1
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 23 9.1
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 23 9.1
AY505416-1|AAR90327.1| 485|Anopheles gambiae catalase 1 protein. 23 9.1
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 23 9.1
AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein. 23 9.1
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 23 9.1
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 26.2 bits (55), Expect = 0.98
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 202 ITVVILELIHAIRTLTSEG*VLLLDQNQSTEGLASEVVNFD 324
+TVV E+ A RT T++ V++LDQN + + V + D
Sbjct: 482 LTVVASEVESAGRTSTAQIRVVVLDQNDNFPEFSQPVYDID 522
>DQ986315-1|ABK59975.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980210-1|ABL09378.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980209-1|ABL09377.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980208-1|ABL09376.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980207-1|ABL09375.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980206-1|ABL09374.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980205-1|ABL09373.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980204-1|ABL09372.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980203-1|ABL09371.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980202-1|ABL09370.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980201-1|ABL09369.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980200-1|ABL09368.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ980199-1|ABL09367.1| 504|Anopheles gambiae catalase protein.
Length = 504
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 465 HLKDASPFLQERAVKNF 481
>DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein.
Length = 511
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 539 GSDEK*RYGTLTRPRNRNEYTLNILTRNNWEG 634
G DE+ L P N + Y+L ++ NN +G
Sbjct: 340 GKDEQLDAKFLELPYNNSRYSLLLMVPNNKDG 371
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/48 (18%), Positives = 25/48 (52%)
Frame = +3
Query: 57 ELPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 200
E+P + Y C + + ++ +RR + +++++P + +S+L
Sbjct: 213 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFL 260
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/48 (18%), Positives = 25/48 (52%)
Frame = +3
Query: 57 ELPG*SCQ*LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 200
E+P + Y C + + ++ +RR + +++++P + +S+L
Sbjct: 213 EVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFL 260
>AY505416-1|AAR90327.1| 485|Anopheles gambiae catalase 1 protein.
Length = 485
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 383 HLKDASPVLDHAICKSY 333
HLKDASP L K++
Sbjct: 449 HLKDASPFLQERAVKNF 465
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.0 bits (47), Expect = 9.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 595 VHFKYFNEEQLGGASLVPAAXGNSXLPIAVY 687
++ KY NEE+L + G + IA+Y
Sbjct: 920 IYVKYRNEEKLSALDRKLQSGGERAVAIAIY 950
>AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein.
Length = 391
Score = 23.0 bits (47), Expect = 9.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 8 LRPMRCDVLVFELTKKRAPWLILPVVICLSQRLSHACLSASRIKAIPRMAQYI 166
LR D+L+ LT + + P + +L+HA S +KA P + Q +
Sbjct: 307 LRLSSIDLLLQSLTAENGTLVQDPEYVYRLSQLAHAMPSLVDVKAHPDLQQSV 359
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 23.0 bits (47), Expect = 9.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 8 LRPMRCDVLVFELTKKRA 61
+R R D+LV+E KKRA
Sbjct: 1098 IRANRPDILVYEKRKKRA 1115
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,870
Number of Sequences: 2352
Number of extensions: 15660
Number of successful extensions: 73
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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