Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060111.seq
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105 prot...    29   4.5  
AY113313-1|AAM29318.1|  266|Drosophila melanogaster AT27946p pro...    29   6.0  
AY058582-1|AAL13811.1|  350|Drosophila melanogaster LD27852p pro...    29   6.0  
AE014296-117|AAF47398.1|  350|Drosophila melanogaster CG12030-PA...    29   6.0  

>DQ138932-1|ABA86538.1| 1387|Drosophila melanogaster CG12105
           protein.
          Length = 1387

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 446 NQGSIPEREPEKRLPHPRKAAARKLPTPG 532
           N  ++PE EPE   PHP  AA   +  PG
Sbjct: 112 NYRAMPEDEPEYPHPHPPTAATTTMTQPG 140


>AY113313-1|AAM29318.1|  266|Drosophila melanogaster AT27946p
           protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
 Frame = +2

Query: 374 LSNVCLINFRW*FLRLPWLS----RVTGNQGSIPEREPEKRLPHPRKAAARKLPTPGTGG 541
           L ++C  + RW  + L + +     ++G  G  P  EP   +P+  + A  + P+    G
Sbjct: 85  LKDLCKSDKRWAVVSLRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYG 144

Query: 542 SDEK*RYGTLTR 577
           SD     GT  R
Sbjct: 145 SDFPTHDGTGVR 156


>AY058582-1|AAL13811.1|  350|Drosophila melanogaster LD27852p
           protein.
          Length = 350

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
 Frame = +2

Query: 374 LSNVCLINFRW*FLRLPWLS----RVTGNQGSIPEREPEKRLPHPRKAAARKLPTPGTGG 541
           L ++C  + RW  + L + +     ++G  G  P  EP   +P+  + A  + P+    G
Sbjct: 169 LKDLCKSDKRWAVVSLRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYG 228

Query: 542 SDEK*RYGTLTR 577
           SD     GT  R
Sbjct: 229 SDFPTHDGTGVR 240


>AE014296-117|AAF47398.1|  350|Drosophila melanogaster CG12030-PA
           protein.
          Length = 350

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
 Frame = +2

Query: 374 LSNVCLINFRW*FLRLPWLS----RVTGNQGSIPEREPEKRLPHPRKAAARKLPTPGTGG 541
           L ++C  + RW  + L + +     ++G  G  P  EP   +P+  + A  + P+    G
Sbjct: 169 LKDLCKSDKRWAVVSLRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYG 228

Query: 542 SDEK*RYGTLTR 577
           SD     GT  R
Sbjct: 229 SDFPTHDGTGVR 240


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,013,982
Number of Sequences: 53049
Number of extensions: 675247
Number of successful extensions: 1920
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1919
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)