Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060110.seq
(686 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 161 6e-40
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 7e-30
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 123 2e-28
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 97 9e-21
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 70 2e-12
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 44 9e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 32 0.38
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.87
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_3082| Best HMM Match : ig (HMM E-Value=1.5e-17) 29 3.5
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.7
SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 8.1
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 28 8.1
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 161 bits (390), Expect = 6e-40
Identities = 91/175 (52%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 254 RTP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAS*DQGSI*G*RQNLFPRXSQ 430
P T + + ++ + + E Q G +++ FP
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 431 FHGAYENEGNCRSLSRQNCAECSYHGSAYFNDSQRQATKDAGTISGLNVLRIINE 595
+ + + + AYF+DSQRQATKDAGTI+GLNVLRIINE
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINE 175
Score = 91.1 bits (216), Expect = 8e-19
Identities = 53/101 (52%), Positives = 64/101 (63%)
Frame = +3
Query: 372 PKIKVAYKGEDKTFFPXEVSSMVLTKMKETAEAYLGKTVXNAVITGPRTSMTLKDKPQKM 551
PKI+V +KGE K+FFP E+SSMVLTKMKETAEAYLG V +AV+T P + + K
Sbjct: 101 PKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKD 160
Query: 552 QVPSQA*TFSESSMKPTAAAIAYGLDKKGYLENGNVLXFGL 674
+PTAAAIAYGLDKK +E NVL + L
Sbjct: 161 AGTIAGLNVLRIINEPTAAAIAYGLDKKVGVER-NVLIYDL 200
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGILRSR*HIRVKTKPFSPXKSVP 435
NP NT+FDAKRLIGRKF+D V DM HWPF V+ +G + + + + K F P +
Sbjct: 62 NPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISS 121
Query: 436 WCLRK 450
L K
Sbjct: 122 MVLTK 126
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 127 bits (307), Expect = 7e-30
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 254 RTPT 265
PT
Sbjct: 61 MNPT 64
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/47 (72%), Positives = 38/47 (80%)
Frame = +3
Query: 372 PKIKVAYKGEDKTFFPXEVSSMVLTKMKETAEAYLGKTVXNAVITGP 512
PK+KV YKGE KTFF E+SSMVL KMKETAEAYLG V +AV+T P
Sbjct: 126 PKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGILRSR*HIRVKTKPF 414
NP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G + + + +TK F
Sbjct: 62 NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTF 114
Score = 62.1 bits (144), Expect = 4e-10
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +3
Query: 423 EVSSMVLTKMKETAEAYLGKTVXNAVITGPRTSMTLKDKPQKMQVPSQA*TFSESSMKPT 602
++SSMVL KMKETAEAYLG V +AV+T P + + K +PT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 603 AAAIAYGLDKKGYLENGNVLXFGL 674
AAAIAYGLDKK E NVL F L
Sbjct: 271 AAAIAYGLDKKVGQER-NVLIFDL 293
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +2
Query: 512 AYFNDSQRQATKDAGTISGLNVLRIINE 595
AYFNDSQRQATKDAG ISGLNVLRIINE
Sbjct: 241 AYFNDSQRQATKDAGVISGLNVLRIINE 268
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 512 AYFNDSQRQATKDAG 556
AYFNDSQRQATKDAG
Sbjct: 173 AYFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 123 bits (296), Expect = 2e-28
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +2
Query: 74 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 254 RTP 262
P
Sbjct: 61 LNP 63
Score = 82.2 bits (194), Expect = 4e-16
Identities = 52/101 (51%), Positives = 60/101 (59%)
Frame = +3
Query: 372 PKIKVAYKGEDKTFFPXEVSSMVLTKMKETAEAYLGKTVXNAVITGPRTSMTLKDKPQKM 551
PKI+V YKGE KTF E+SSMVL KMKETAEAYLG+ V +AVIT P + + K
Sbjct: 101 PKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKD 160
Query: 552 QVPSQA*TFSESSMKPTAAAIAYGLDKKGYLENGNVLXFGL 674
+PTAAA+AYGLDK E NVL F L
Sbjct: 161 AGTIAGLNVLRVINEPTAAALAYGLDKSLSGEK-NVLIFDL 200
Score = 68.1 bits (159), Expect = 6e-12
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD 363
NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD
Sbjct: 62 NPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISD 97
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 97.5 bits (232), Expect = 9e-21
Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVARTP 262
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Score = 79.4 bits (187), Expect = 3e-15
Identities = 48/103 (46%), Positives = 60/103 (58%)
Frame = +3
Query: 366 RHPKIKVAYKGEDKTFFPXEVSSMVLTKMKETAEAYLGKTVXNAVITGPRTSMTLKDKPQ 545
+ P ++V K E KTF E+S+MVLTKMKETAEAYLGK V +AV+T P + +
Sbjct: 797 KKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQAT 856
Query: 546 KMQVPSQA*TFSESSMKPTAAAIAYGLDKKGYLENGNVLXFGL 674
K T +PTAAAIAYG+DKK N+L F L
Sbjct: 857 KDAGAIAGLTVMRIINEPTAAAIAYGMDKKE--GEKNILVFDL 897
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGILRSR*HIRVKTK 408
NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV + H++VK K
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDK----NKKPHVQVKVK 806
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 69.7 bits (163), Expect = 2e-12
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Frame = +2
Query: 80 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 253
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 254 RTP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVMEAS*DQ----GSI*G*RQNLFP 418
P T Y +K L + + +L + D+ G + G + N
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLE------IGKLYQFRVTTDKRGNAGFLVGKKGNFTV 143
Query: 419 RXSQFHGAYENEGNCRSLSRQN----CAECSYHGSAYFNDSQRQATKDAGTISGLNVLRI 586
+ G Y + R+++ +N + A F+ QR AT A +++G+ VLR+
Sbjct: 144 ITPEEIGGYVIK-KLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRV 202
Query: 587 INE 595
INE
Sbjct: 203 INE 205
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +3
Query: 384 VAYKGEDKTFFPXEVSSMVLTKMKETAEAYLGKTVXNAVITGPRTSMTLKDKPQKMQVPS 563
V KG P E+ V+ K++ AE L TV AV++ P +K + ++ S
Sbjct: 135 VGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVP-AEFDIKQRNATVKAAS 193
Query: 564 QA*-TFSESSMKPTAAAIAYGLDKKGYLENGNVLXFG 671
A T +PTAAA+AYGL KK + N V+ G
Sbjct: 194 LAGITVLRVINEPTAAALAYGLHKKEGVANVMVVDLG 230
Score = 34.7 bits (76), Expect = 0.071
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD 363
NP NTI+DAKR IG+ F + K + F V +D
Sbjct: 91 NPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTD 126
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 92 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 247
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 256 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 357
N NTI KR IGRKF D VQ ++ H P++VV
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVV 151
Score = 35.1 bits (77), Expect = 0.054
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 491 ECSYHGSAYFNDSQRQATKDAGTISGLNVLRIINET 598
+C +Y+ D QR+ DA +GLN LR++N+T
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDT 233
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +3
Query: 378 IKVAYKGEDKTFFPXEVSSMVLTKMKETAEAYLGKTVXNAVITGP 512
I V GE ++F P ++S++VL ++K AEA+LG+ V AVIT P
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/23 (82%), Positives = 23/23 (100%)
Frame = +2
Query: 512 AYFNDSQRQATKDAGTISGLNVL 580
A+FND+QRQATKDAGTI+GL+VL
Sbjct: 47 AHFNDAQRQATKDAGTIAGLDVL 69
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 594 KPTAAAIAYGLDK 632
+PTAAAIAYGLDK
Sbjct: 98 EPTAAAIAYGLDK 110
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 143 GKVEIIANDQGNRTTPSYVAFTDTERLI 226
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 472 ISAKLCXM-QLSR-VRVLQ*LSKTSHKRCRYHLRLERSPNH 588
+SAKLC + LS+ VR LQ S ++C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 472 ISAKLCXM-QLSR-VRVLQ*LSKTSHKRCRYHLRLERSPNH 588
+SAKLC + LS+ VR LQ S ++C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 152 EIIANDQGNRTTPSYVAFT-DTERL 223
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 61 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 237
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 238 QEPGGENPNNTIFDA 282
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_3082| Best HMM Match : ig (HMM E-Value=1.5e-17)
Length = 332
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +3
Query: 210 TPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCASRHEALAFRGCQ*WRH---PKI 380
T S PP W PQ H + S+ + A + +A GC W H +
Sbjct: 76 TCSADGTPPPTFTWISPQGHTVAHGPSYTIPMVHRDMAGVYTCVATDGCG-WNHTMDATL 134
Query: 381 KVAYKGEDKTFFPXE 425
V YK E+ P E
Sbjct: 135 AVRYKPENTKLIPNE 149
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 515 YFNDSQRQATKDAGTISGLNVLRIIN 592
+FN ++R+A A + GLNVL+I+N
Sbjct: 115 FFNQAERRALLRAAELVGLNVLQIMN 140
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 20 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 106
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = -3
Query: 321 HSSIFELTSDETFGIEYCVVGVLATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFP 142
+S + L + T +EY +GVLATW R + V AT L W L +++T
Sbjct: 23 YSRLGVLATWSTGDLEYWRLGVLATWSTGDLEYSR-LGVLATWSTGDLEYWRLGVLAT-- 79
Query: 141 CWKTPTQEY 115
W T EY
Sbjct: 80 -WSTGDLEY 87
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 201 RSQTPSVSSEMPPRTRWREPQQHNIRCQTSHRT*VRRCYCAS 326
R+ P S+ PP RW+ P Q QT H R Y S
Sbjct: 37 RTAEPLSHSKRPPPRRWKAPLQRCRMSQTQHGYRQGRAYTFS 78
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 554 LHLLWLVFESH*STRTRDNCIXHSFAEIS 468
++ LWL F + S+ + D C+ HS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 102 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 245
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,568,836
Number of Sequences: 59808
Number of extensions: 541490
Number of successful extensions: 1616
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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