Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060108.seq
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.3  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   9.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.3  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -3

Query: 609 STTSES*GAARSHTGHSQVGLRSFICRNSDASKH 508
           S T E+    +S+  H++  LR ++C+N D +K+
Sbjct: 313 SKTKET-NLEKSNLNHNEQ-LRKYLCKNEDETKN 344


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -3

Query: 609 STTSES*GAARSHTGHSQVGLRSFICRNSDASKH 508
           S T E+    +S+  H++  LR ++C+N D +K+
Sbjct: 205 SKTKET-NLEKSNLNHNEQ-LRKYLCKNEDETKN 236


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 257 RHVTWIVLETVGDSFTSD 204
           R ++WI LETV +  T++
Sbjct: 109 REISWIFLETVANENTTN 126


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 598 RVVGRGAVAHRTQPGRLALVHLQEQRRVEACRCGQLAG 485
           R  G G   H  +P       L +QRRV A +  QLAG
Sbjct: 295 RADGAGGPLHDHRPA------LAQQRRVAAVQVPQLAG 326


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 353 FGALVLQPL**FCRRELFHHE 291
           FG LV  P    C+RE F HE
Sbjct: 66  FGCLVGTPETLRCQREGFFHE 86


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 273 AYVLSVFMVKKLTSAELLQRLKN 341
           AY+++ + V  L+ ++LLQ++ N
Sbjct: 221 AYIIAHYRVLWLSLSDLLQKMGN 243


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 273 AYVLSVFMVKKLTSAELLQRLKN 341
           AY+++ + V  L+ ++LLQ++ N
Sbjct: 221 AYIIAHYRVLWLSLSDLLQKMGN 243


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 273 AYVLSVFMVKKLTSAELLQRLKN 341
           AY+++ + V  L+ ++LLQ++ N
Sbjct: 221 AYIIAHYRVLWLSLSDLLQKMGN 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,600
Number of Sequences: 336
Number of extensions: 2408
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)