Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060108.seq
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79758-8|CAI79179.1|  695|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z79758-7|CAD98730.1|  763|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z79758-6|CAD98729.1|  673|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z79758-5|CAB54321.1|  687|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z79758-4|CAB02133.2|  790|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z79758-3|CAB02134.1|  689|Caenorhabditis elegans Hypothetical pr...    63   2e-10
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z69791-4|CAA93658.2|  362|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    27   9.3  

>Z79758-8|CAI79179.1|  695|Caenorhabditis elegans Hypothetical
           protein W10D5.3g protein.
          Length = 695

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 509 CFDASLFLQMNERKPTWLCPVCDRAAPYDSLVVDGYFQEVL 631
           CFD   +L MNE+KPTW CPVC    PYD L+VD YF ++L
Sbjct: 324 CFDLLSYLMMNEKKPTWQCPVCSSNCPYDRLIVDDYFLDML 364


>Z79758-7|CAD98730.1|  763|Caenorhabditis elegans Hypothetical
           protein W10D5.3f protein.
          Length = 763

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 509 CFDASLFLQMNERKPTWLCPVCDRAAPYDSLVVDGYFQEVL 631
           CFD   +L MNE+KPTW CPVC    PYD L+VD YF ++L
Sbjct: 391 CFDLLSYLMMNEKKPTWQCPVCSSNCPYDRLIVDDYFLDML 431


>Z79758-6|CAD98729.1|  673|Caenorhabditis elegans Hypothetical
           protein W10D5.3e protein.
          Length = 673

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 509 CFDASLFLQMNERKPTWLCPVCDRAAPYDSLVVDGYFQEVL 631
           CFD   +L MNE+KPTW CPVC    PYD L+VD YF ++L
Sbjct: 391 CFDLLSYLMMNEKKPTWQCPVCSSNCPYDRLIVDDYFLDML 431


>Z79758-5|CAB54321.1|  687|Caenorhabditis elegans Hypothetical
           protein W10D5.3d protein.
          Length = 687

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 509 CFDASLFLQMNERKPTWLCPVCDRAAPYDSLVVDGYFQEVL 631
           CFD   +L MNE+KPTW CPVC    PYD L+VD YF ++L
Sbjct: 389 CFDLLSYLMMNEKKPTWQCPVCSSNCPYDRLIVDDYFLDML 429


>Z79758-4|CAB02133.2|  790|Caenorhabditis elegans Hypothetical
           protein W10D5.3c protein.
          Length = 790

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 509 CFDASLFLQMNERKPTWLCPVCDRAAPYDSLVVDGYFQEVL 631
           CFD   +L MNE+KPTW CPVC    PYD L+VD YF ++L
Sbjct: 446 CFDLLSYLMMNEKKPTWQCPVCSSNCPYDRLIVDDYFLDML 486


>Z79758-3|CAB02134.1|  689|Caenorhabditis elegans Hypothetical
           protein W10D5.3a protein.
          Length = 689

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 509 CFDASLFLQMNERKPTWLCPVCDRAAPYDSLVVDGYFQEVL 631
           CFD   +L MNE+KPTW CPVC    PYD L+VD YF ++L
Sbjct: 391 CFDLLSYLMMNEKKPTWQCPVCSSNCPYDRLIVDDYFLDML 431


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 318 ELLQRLKNKGTKNPDYTRSLIKEK 389
           ELLQR+K K  + PD+T  +I+ K
Sbjct: 296 ELLQRVKEKTVRRPDFTAKMIELK 319


>Z69791-4|CAA93658.2|  362|Caenorhabditis elegans Hypothetical
           protein F39D8.3 protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 285 SVFMVKKLTSAELLQRLKNKGTKNPD 362
           S+   KKL+  EL+  LK KGT NP+
Sbjct: 98  SLTTCKKLSQPELVAELKQKGTYNPE 123


>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = +3

Query: 312 SAELLQRLKNKGTKNPDYTRSLIKEKLSEDYDSEIATTSLRVSLMCPLGKMRMSCPCRPA 491
           S  ++++ K+ GT N +  + + KE   +  D  + ++S   +   P G  R S P    
Sbjct: 197 SKTVVEKTKSPGTVNKE--KQVKKEPKQDPLDKLLPSSSASKTSSSPAGLKRKSAPSEHP 254

Query: 492 NCP 500
           N P
Sbjct: 255 NAP 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,201,874
Number of Sequences: 27780
Number of extensions: 231343
Number of successful extensions: 697
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)