Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060107.seq
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.9  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   8.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   8.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.9  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 544 KPVQARRNLRCRSRFCGKVKSGTILWT 624
           K VQ   N+R +S +C  V S    W+
Sbjct: 101 KMVQNHNNIREKSHYCLFVASNCFFWS 127


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 544 KPVQARRNLRCRSRFCGKVKSGTILWT 624
           K VQ   N+R +S +C  V S    W+
Sbjct: 101 KMVQNHNNIREKSHYCLFVASNCFFWS 127


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = -3

Query: 503 PWAFVSWVINLFWCPNALVVWVVNHRWLPFSVHLIIPVFRFGGIWI 366
           P  ++ + I +      L +W + ++W  F  +    VF F  I I
Sbjct: 38  PRWYICYTIGVIITIGCLCIWSIFNKWNQFRSYSNFSVFLFDIITI 83


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 557 RDEICAVGLDFVAKSSPVPFFGRL 628
           R  + AVG++ +   S +P  GRL
Sbjct: 61  RKALRAVGIEKIILESAIPMKGRL 84


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 557 RDEICAVGLDFVAKSSPVPFFGRL 628
           R  + AVG++ +   S +P  GRL
Sbjct: 61  RKALRAVGIEKIILESAIPMKGRL 84


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 557 RDEICAVGLDFVAKSSPVPFFGRL 628
           R  + AVG++ +   S +P  GRL
Sbjct: 61  RKALRAVGIEKIILESAIPMKGRL 84


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 341 ILRLLVFGVWNSGLVIPVFWF 279
           I+ LL+FGV    +VI +F+F
Sbjct: 525 IVLLLMFGVSFVVIVITIFFF 545


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 341 ILRLLVFGVWNSGLVIPVFWF 279
           I+ LL+FGV    +VI +F+F
Sbjct: 250 IVLLLMFGVSFVVIVITIFFF 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,570
Number of Sequences: 336
Number of extensions: 3965
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)