Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060107.seq
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.   169   5e-44
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    25   1.6  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   2.1  
AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding pr...    23   6.4  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    23   6.4  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score =  169 bits (412), Expect = 5e-44
 Identities = 73/83 (87%), Positives = 77/83 (92%)
 Frame = +1

Query: 10  ETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV 189
           ETPY +MFGPDICGPGTKKVHVIFSYKGKNHLI KDIRCKDDV+TH YTL+V+ DNTYEV
Sbjct: 122 ETPYLVMFGPDICGPGTKKVHVIFSYKGKNHLINKDIRCKDDVFTHFYTLVVRADNTYEV 181

Query: 190 LIDNEKVESGDLEADWDFLPPKK 258
           LIDNEKVESG LE DWDFLPPKK
Sbjct: 182 LIDNEKVESGSLEDDWDFLPPKK 204



 Score = 97.5 bits (232), Expect = 3e-22
 Identities = 45/87 (51%), Positives = 47/87 (54%)
 Frame = +3

Query: 255 KIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDATKXXXXXXXXXXXXXXXXI 434
           KIKDPEAKKPEDW                     HIPDPDATK                I
Sbjct: 204 KIKDPEAKKPEDWDDRATIADPDDTKPEDWDKPEHIPDPDATKPDDWDDEMDGEWEPPMI 263

Query: 435 DNPDYKGVWAPKQIDNPAYKGPWVHPK 515
           DNP+YKG W PKQIDNPAYKG WVHP+
Sbjct: 264 DNPEYKGEWKPKQIDNPAYKGVWVHPE 290



 Score = 47.2 bits (107), Expect(2) = 4e-08
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 509 PEIDNPEYTPDSNLYKRDEICAVGLD 586
           PEIDNPEY  D +LY R+E+CAVG+D
Sbjct: 289 PEIDNPEYEEDKSLYLREEVCAVGID 314



 Score = 23.0 bits (47), Expect(2) = 4e-08
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 506 PPEIDNPEY 532
           PP IDNPEY
Sbjct: 260 PPMIDNPEY 268


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 70  HVIFSYKGKNHLIKKDIRCKDDVYTHLYTL 159
           H+++  +G N +++KD R +   Y H  T+
Sbjct: 213 HLVYPARGPNRIVRKDRRGELFYYMHQQTM 242


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 452 GRLGTKTD**PSLQRPMGPPEIDNP-EYTPD 541
           GR G+  D  P  ++PMGPP    P   TPD
Sbjct: 78  GRAGSDEDELPQPRQPMGPPVPGVPIMTTPD 108


>AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding
           protein AgamOBP46 protein.
          Length = 202

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 135 CLHTFVHSDCET 170
           C+HT V SDC T
Sbjct: 165 CIHTTVFSDCPT 176


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 135 CLHTFVHSDCET 170
           C+HT V SDC T
Sbjct: 162 CIHTTVFSDCPT 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,471
Number of Sequences: 2352
Number of extensions: 16759
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)