Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060107.seq
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 128 3e-30
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 128 3e-30
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 31 0.72
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 30 1.3
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 30 1.3
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 30 1.3
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 30 1.3
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 30 1.3
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 30 1.3
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 30 1.3
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 30 1.3
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 30 1.3
U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine rec... 27 8.9
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 27 8.9
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 128 bits (309), Expect = 3e-30
Identities = 56/83 (67%), Positives = 65/83 (78%)
Frame = +1
Query: 10 ETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV 189
ETPY +MFGPDICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV
Sbjct: 121 ETPYNVMFGPDICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEV 179
Query: 190 LIDNEKVESGDLEADWDFLPPKK 258
ID E ++G LE DWD LP KK
Sbjct: 180 KIDGESAQTGSLEEDWDLLPAKK 202
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/87 (47%), Positives = 45/87 (51%)
Frame = +3
Query: 255 KIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDATKXXXXXXXXXXXXXXXXI 434
KIKDP+AKKPEDW HIPDPDA K I
Sbjct: 202 KIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEWEPPMI 261
Query: 435 DNPDYKGVWAPKQIDNPAYKGPWVHPK 515
DNP+YKG W PKQI NPAYKG W+HP+
Sbjct: 262 DNPEYKGEWKPKQIKNPAYKGKWIHPE 288
Score = 38.3 bits (85), Expect(2) = 3e-04
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 509 PEIDNPEYTPDSNLYKRDEICAVGLD 586
PEI+NPEYTPD LY + A+G D
Sbjct: 287 PEIENPEYTPDDELYSYESWGAIGFD 312
Score = 23.0 bits (47), Expect(2) = 3e-04
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 506 PPEIDNPEY 532
PP IDNPEY
Sbjct: 258 PPMIDNPEY 266
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 128 bits (309), Expect = 3e-30
Identities = 56/83 (67%), Positives = 65/83 (78%)
Frame = +1
Query: 10 ETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV 189
ETPY +MFGPDICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV
Sbjct: 121 ETPYNVMFGPDICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEV 179
Query: 190 LIDNEKVESGDLEADWDFLPPKK 258
ID E ++G LE DWD LP KK
Sbjct: 180 KIDGESAQTGSLEEDWDLLPAKK 202
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/87 (47%), Positives = 45/87 (51%)
Frame = +3
Query: 255 KIKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXHIPDPDATKXXXXXXXXXXXXXXXXI 434
KIKDP+AKKPEDW HIPDPDA K I
Sbjct: 202 KIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWDDEMDGEWEPPMI 261
Query: 435 DNPDYKGVWAPKQIDNPAYKGPWVHPK 515
DNP+YKG W PKQI NPAYKG W+HP+
Sbjct: 262 DNPEYKGEWKPKQIKNPAYKGKWIHPE 288
Score = 38.3 bits (85), Expect(2) = 3e-04
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 509 PEIDNPEYTPDSNLYKRDEICAVGLD 586
PEI+NPEYTPD LY + A+G D
Sbjct: 287 PEIENPEYTPDDELYSYESWGAIGFD 312
Score = 23.0 bits (47), Expect(2) = 3e-04
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 506 PPEIDNPEY 532
PP IDNPEY
Sbjct: 258 PPMIDNPEY 266
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Frame = +1
Query: 10 ETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCK----------DDVYTHLYTL 159
+T Y IMFGPD CG T KVH+IF YK + + DD THL+TL
Sbjct: 174 KTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDHNTHLFTL 232
Query: 160 IVKPDNTYEVLIDNEKVESGDLEADWD--FLPPKK 258
+VKP Y V +D + + G++ +D PPK+
Sbjct: 233 VVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQ 267
Score = 41.1 bits (92), Expect = 7e-04
Identities = 28/95 (29%), Positives = 33/95 (34%), Gaps = 9/95 (9%)
Frame = +3
Query: 258 IKDPEAKKPEDWXXXXXXXXXXXXXXXXXXXXXH----IPDPDATKXXXXXXXXXXXXXX 425
I+D A KP+DW I DP+A K
Sbjct: 285 IEDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDEDMDGSWEA 344
Query: 426 XXIDNPDYKGV-----WAPKQIDNPAYKGPWVHPK 515
IDNP KG+ W I NP YKG W+ PK
Sbjct: 345 PLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPK 379
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 432 IDNPDYKGVWAPKQIDNPAYKGPW 503
I NP YKG W +I NPA+KG W
Sbjct: 366 IKNPKYKGKWIRPKISNPAFKGKW 389
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 432 IDNPDYKGVWAPKQIDNPAYKGP 500
I NP +KG W + IDNP Y P
Sbjct: 380 ISNPAFKGKWTARLIDNPNYFEP 402
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 139 YTHLYTLIVKPDN-TYEVLIDNEKVESGDLEADWDFLPPKKSRTLKP-RNQKTGMTS 303
+TH +TL VKP N Y+ DN+ ++ E F P + T P + +TG S
Sbjct: 23 HTHKWTLFVKPGNRDYDEFPDNKLIQKVKFEIHESFAQPVRFVTKPPFKITETGFAS 79
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKSRTLKPRNQKTGMTS 303
CK+ V T YTLI K D +VLI N+ + S D + ++ S T R T
Sbjct: 5431 CKELVDTSKYTLINKGDK--QVLIIND-LTSDDAD-EYTCRATNSSGTRSTRANLRIKTK 5486
Query: 304 P-LFQTPKTRSLRIGTSLNTFQIQMP-PNLKTGMMRWTENGSHL 429
P +F PK T ++++P G RWT++G +
Sbjct: 5487 PRVFIPPKYHGGYEAQKGETIELKIPYKAYPQGEARWTKDGEKI 5530
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKSRTLKPRNQKTGMTS 303
CK+ V T YTLI K D +VLI N+ + S D + ++ S T R T
Sbjct: 5960 CKELVDTSKYTLINKGDK--QVLIIND-LTSDDAD-EYTCRATNSSGTRSTRANLRIKTK 6015
Query: 304 P-LFQTPKTRSLRIGTSLNTFQIQMP-PNLKTGMMRWTENGSHL 429
P +F PK T ++++P G RWT++G +
Sbjct: 6016 PRVFIPPKYHGGYEAQKGETIELKIPYKAYPQGEARWTKDGEKI 6059
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKSRTLKPRNQKTGMTS 303
CK+ V T YTLI K D +VLI N+ + S D + ++ S T R T
Sbjct: 5641 CKELVDTSKYTLINKGDK--QVLIIND-LTSDDAD-EYTCRATNSSGTRSTRANLRIKTK 5696
Query: 304 P-LFQTPKTRSLRIGTSLNTFQIQMP-PNLKTGMMRWTENGSHL 429
P +F PK T ++++P G RWT++G +
Sbjct: 5697 PRVFIPPKYHGGYEAQKGETIELKIPYKAYPQGEARWTKDGEKI 5740
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKSRTLKPRNQKTGMTS 303
CK+ V T YTLI K D +VLI N+ + S D + ++ S T R T
Sbjct: 5431 CKELVDTSKYTLINKGDK--QVLIIND-LTSDDAD-EYTCRATNSSGTRSTRANLRIKTK 5486
Query: 304 P-LFQTPKTRSLRIGTSLNTFQIQMP-PNLKTGMMRWTENGSHL 429
P +F PK T ++++P G RWT++G +
Sbjct: 5487 PRVFIPPKYHGGYEAQKGETIELKIPYKAYPQGEARWTKDGEKI 5530
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKSRTLKPRNQKTGMTS 303
CK+ V T YTLI K D +VLI N+ + S D + ++ S T R T
Sbjct: 5960 CKELVDTSKYTLINKGDK--QVLIIND-LTSDDAD-EYTCRATNSSGTRSTRANLRIKTK 6015
Query: 304 P-LFQTPKTRSLRIGTSLNTFQIQMP-PNLKTGMMRWTENGSHL 429
P +F PK T ++++P G RWT++G +
Sbjct: 6016 PRVFIPPKYHGGYEAQKGETIELKIPYKAYPQGEARWTKDGEKI 6059
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKSRTLKPRNQKTGMTS 303
CK+ V T YTLI K D +VLI N+ + S D + ++ S T R T
Sbjct: 5641 CKELVDTSKYTLINKGDK--QVLIIND-LTSDDAD-EYTCRATNSSGTRSTRANLRIKTK 5696
Query: 304 P-LFQTPKTRSLRIGTSLNTFQIQMP-PNLKTGMMRWTENGSHL 429
P +F PK T ++++P G RWT++G +
Sbjct: 5697 PRVFIPPKYHGGYEAQKGETIELKIPYKAYPQGEARWTKDGEKI 5740
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 30.3 bits (65), Expect = 1.3
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 124 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKSRTLKPRNQKTGMTS 303
CK+ V T YTLI K D +VLI N+ + S D + ++ S T R T
Sbjct: 4850 CKELVDTSKYTLINKGDK--QVLIIND-LTSDDAD-EYTCRATNSSGTRSTRANLRIKTK 4905
Query: 304 P-LFQTPKTRSLRIGTSLNTFQIQMP-PNLKTGMMRWTENGSHL 429
P +F PK T ++++P G RWT++G +
Sbjct: 4906 PRVFIPPKYHGGYEAQKGETIELKIPYKAYPQGEARWTKDGEKI 4949
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 94 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 216
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 94 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVES 216
K I+K++ C+D THL L D+TY V ++ NE+V++
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDN 12895
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -3
Query: 323 FGVWNSGLVIPVFWFLGFRVL-DFLGGRKSQSASRSPDSTF-SLSMRTS*VLSGFTIRVY 150
F + N+ L F F GF+VL D GR P T +R L+ +T++
Sbjct: 216 FLILNACLKSSDFLFFGFQVLNDIWAGRPWTETGHFPRVTLCDFEVRYLANLNRYTVQCA 275
Query: 149 KCV*TSSLQRISFLMRWFLPL*LKITCTFL 60
+ + + +FL W++ L + TC+F+
Sbjct: 276 LLINIINEKVFAFLWCWYMILAIITTCSFI 305
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -3
Query: 323 FGVWNSGLVIPVFWFLGFRVL-DFLGGRKSQSASRSPDSTF-SLSMRTS*VLSGFTIRVY 150
F + N+ L F F GF+VL D GR P T +R L+ +T++
Sbjct: 232 FLILNACLKSSDFLFFGFQVLNDIWAGRPWTETGHFPRVTLCDFEVRYLANLNRYTVQCA 291
Query: 149 KCV*TSSLQRISFLMRWFLPL*LKITCTFL 60
+ + + +FL W++ L + TC+F+
Sbjct: 292 LLINIINEKVFAFLWCWYMILAIITTCSFI 321
>U40028-10|AAA81121.3| 363|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 40 protein.
Length = 363
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 446 VWVVNHRWLPFSVHLIIPVFR-FGGIWIWNV 357
+W+ + WL + L+I F FG IW WN+
Sbjct: 193 LWLSVYIWLLTGILLLIVNFGLFGYIWYWNI 223
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 141 VDIIFAADIFFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIW 16
+D+I A+D+FFD + + + LL ++ EH IW
Sbjct: 111 LDVIIASDVFFDPSTFCPLIDTFAQLL------IKFEHATIW 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,820,773
Number of Sequences: 27780
Number of extensions: 363351
Number of successful extensions: 1083
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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