Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060105.seq
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.3  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.0  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   7.0  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   9.3  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   9.3  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
 Frame = +3

Query: 507 SLNHHTVSPDLRKSRRK----YPHTSRRLATTQLLSLSCPFLDGHGDNMF 644
           +L+HH + PD+ K+ +     +  T    AT +L+++S  +    G N+F
Sbjct: 826 ALDHHDMDPDMEKALKSGNYFFTATFAIEATMKLIAMSPKYYFQEGWNIF 875


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 515 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 607
           PP+S      +KK+   Y+++   N +A  F
Sbjct: 333 PPWSNRTLRNLKKDRMKYLRRYRLNRSAFNF 363


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 452 ARFHPRCQTAHRRSKQNGFTEPPYS 526
           ARF P   T+HR S  N  +  P S
Sbjct: 344 ARFDPSALTSHRSSSANCSSAAPKS 368


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 270 WKFETSKYYVTIIDAPG 320
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -3

Query: 472 TPRVKASKACSRV*PFLEIPASNSPVPAATMSTAQSA*EVP 350
           T R  AS   S   P   IPA + PVPA      QS   +P
Sbjct: 354 TSRPVASGPTSHYYPS-HIPAGSQPVPAVVNPHQQSRPTIP 393


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,623
Number of Sequences: 2352
Number of extensions: 15207
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)