Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060104.seq
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   6.2  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   6.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   6.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   6.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.2  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 417 DETSNWHWSIM 385
           DE SNW+W+ +
Sbjct: 21  DEGSNWNWNTL 31


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 417 DETSNWHWSIM 385
           DE SNW+W+ +
Sbjct: 65  DEGSNWNWNTL 75


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 417 DETSNWHWSIM 385
           DE SNW+W+ +
Sbjct: 65  DEGSNWNWNTL 75


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 417 DETSNWHWSIM 385
           DE SNW+W+ +
Sbjct: 65  DEGSNWNWNTL 75


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 469 PLGVGLLVAGYDDQGXSYFTRLVRQANYF 555
           P+    L++ +D+Q  SYFT+ +  A Y+
Sbjct: 195 PVNYSALLS-HDEQQLSYFTQDIGLAAYY 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,071
Number of Sequences: 438
Number of extensions: 3966
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)