Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060103.seq
(658 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0902 + 24176326-24176706,24176785-24177017,24177121-241772... 40 0.002
06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506,711... 38 0.007
12_02_0942 - 24653834-24654046,24654346-24654482,24654626-246549... 37 0.012
03_02_0103 + 5640652-5641029,5641458-5641693,5642292-5642367,564... 36 0.021
02_04_0536 + 23730396-23731736 35 0.050
01_01_0937 - 7388230-7388283,7388957-7389091,7389201-7389365,738... 34 0.087
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 34 0.087
02_04_0552 - 23804154-23805326 33 0.15
12_01_1112 - 11866376-11866447,11866528-11866662,11866772-118669... 33 0.26
03_02_0104 + 5645285-5645677,5645990-5646034,5646225-5646454,564... 33 0.26
08_02_0703 - 20188489-20190246 32 0.35
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324... 31 1.1
08_02_1018 + 23640889-23641245,23641868-23641954,23642063-236421... 31 1.1
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 29 2.5
09_04_0441 + 17626285-17626620,17626726-17626812,17627195-176272... 29 2.5
04_01_0341 - 4442727-4445597 29 3.3
09_06_0078 + 20727684-20728036,20728871-20728895,20729218-207293... 29 4.3
10_08_0290 + 16549048-16549262,16549770-16549833,16550106-165502... 28 5.7
09_03_0160 - 12915283-12915453,12915546-12915713,12915944-129159... 28 5.7
09_01_0057 - 916973-917287,917371-917495,917587-918241 28 5.7
03_05_0329 - 23211636-23211857,23211946-23212079,23212170-232124... 28 5.7
08_02_1059 + 24006493-24006999 28 7.5
05_03_0413 + 13639476-13639537,13639702-13639783,13639865-136399... 28 7.5
02_05_0319 - 27872601-27874457 28 7.5
08_02_1312 + 26055372-26056056,26056935-26057187,26057277-260580... 27 9.9
01_06_1480 - 37660591-37660720,37660899-37660930,37661061-376611... 27 9.9
>12_02_0902 +
24176326-24176706,24176785-24177017,24177121-24177273,
24177392-24177425,24177536-24177685,24177772-24177906,
24177994-24178065
Length = 385
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +1
Query: 265 RGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRADRLTHVALACLSLAAKSED 441
R LV L + + L TL+ AVS LD ++ AH LR +RL + + + +AAK E+
Sbjct: 151 RAILVDWLVEVADEYKLVADTLYLAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAAKYEE 209
>06_01_0922 -
7113781-7113942,7114093-7114235,7115305-7115506,
7115590-7115685,7117053-7117139,7117237-7117638
Length = 363
Score = 37.9 bits (84), Expect = 0.007
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 310 GLTIATLHSAVSLLDLFMDAHRLRADRLTH--VALACLSLAAKSEDKFSRAPTLKTLSRI 483
G AT + AVS +D FM + L + +ACLSLAAK E+ S AP L L +I
Sbjct: 140 GFQPATAYLAVSYMDRFMSSRSLPDHGWASQLLCVACLSLAAKMEE--SSAPPLLDL-QI 196
Query: 484 SGVQLCGE--AFRQLEWMVGQHVRWRL 558
G + E +++E +V + WRL
Sbjct: 197 EGTRFIFEPRTIQRMELIVLVELDWRL 223
>12_02_0942 -
24653834-24654046,24654346-24654482,24654626-24654959,
24655067-24655153,24655254-24655580
Length = 365
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +1
Query: 259 QFRGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRADRLTHVA----LACLSLA 426
Q R + V+ + + G T + A++ D F R+ + + A +AC+S+A
Sbjct: 98 QARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVA 157
Query: 427 AKSEDKFSRAPTLKTLSRISGVQLCGEAFRQLEWMVGQHVRWRL 558
AK E+ ++P L G C ++ R++E +V + WR+
Sbjct: 158 AKMEE--YQSPALSEFDAGGGRVFCSDSIRRMELLVLSTLGWRM 199
>03_02_0103 +
5640652-5641029,5641458-5641693,5642292-5642367,
5642450-5642526,5642672-5642702,5642798-5642950,
5643259-5643300,5643372-5643440,5643645-5643752
Length = 389
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 247 VTSLQFRGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRADRLTHVALACLSLA 426
+ ++ RG LV + D L TLH AVS +D F+ D+L + L +A
Sbjct: 145 IINMDVRGILVDWMADVAYVFNLQEETLHHAVSYVDRFLSKIAFPGDKLKLLGTTALFVA 204
Query: 427 AKSED 441
+K E+
Sbjct: 205 SKYEE 209
>02_04_0536 + 23730396-23731736
Length = 446
Score = 35.1 bits (77), Expect = 0.050
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 265 RGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRL---RADRLTHVALACLSLAAKS 435
R SLV + T + L TLH AVS D F+ L A +L+ VA + AAK
Sbjct: 251 RASLVAWMGRLTHRYELAAGTLHRAVSYFDRFLSVRALPSYTAHQLSLVAATAVYTAAKY 310
Query: 436 EDK 444
ED+
Sbjct: 311 EDQ 313
>01_01_0937 -
7388230-7388283,7388957-7389091,7389201-7389365,
7389436-7389516,7389692-7389767,7389855-7389988,
7390082-7390174,7390885-7391018,7391125-7391533,
7392381-7392593
Length = 497
Score = 34.3 bits (75), Expect = 0.087
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 265 RGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRADRLTHVALACLSLAAKSED 441
R L+ L + ++ L TL+ V+ +D ++ + + RL + +AC+ +AAK E+
Sbjct: 274 RAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEE 332
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 34.3 bits (75), Expect = 0.087
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 265 RGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRADRLTHVALACLSLAAKSED 441
R L+ L + ++ L TL+ V+ +D ++ + + RL + +AC+ +AAK E+
Sbjct: 276 RAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEE 334
>02_04_0552 - 23804154-23805326
Length = 390
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 265 RGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRA---DRLTHVALACLSLAAKS 435
R SLV + T + L TLH AVS D F+ A L + +L+ V + AAK
Sbjct: 195 RASLVAWMGRLTHRYELAAGTLHRAVSYFDRFLSARALPSYTEHQLSLVGATAVYTAAKY 254
Query: 436 EDK 444
ED+
Sbjct: 255 EDQ 257
>12_01_1112 -
11866376-11866447,11866528-11866662,11866772-11866921,
11867263-11867338,11867426-11867559,11867655-11867747,
11868456-11868589,11868696-11868744,11869271-11869441,
11870291-11870452
Length = 391
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +1
Query: 265 RGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRADRLTHVALACLSLAAKSED 441
R L+ L + ++ L TL+ V+ +D ++ + + RL + +AC+ +AAK ++
Sbjct: 194 RAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYKE 252
>03_02_0104 +
5645285-5645677,5645990-5646034,5646225-5646454,
5646549-5646624,5646705-5646781,5646960-5646990,
5647058-5647210,5647287-5647421,5647526-5647606
Length = 406
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 256 LQFRGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRADRLTHVALACLSLAAKS 435
+ RG LV + + L L+ AVS +D F+ + + +RL + + L +A+K
Sbjct: 166 INMRGKLVNWMEELVYGFNLWDNILYLAVSYVDRFLSRNVVNRERLQLLGTSALFVASKY 225
Query: 436 EDK 444
ED+
Sbjct: 226 EDR 228
>08_02_0703 - 20188489-20190246
Length = 585
Score = 32.3 bits (70), Expect = 0.35
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 319 IATLHSAVSLLDLFMDA-HRLRADRLTHVALACLSLAAKSEDKFSRAP-TLKTLSRISGV 492
I L + LLDLF H RA R +AL LSL+A ++ K +RAP K L I+
Sbjct: 360 IGVLGAVQPLLDLFTSRDHAPRARRDAGMALYHLSLSAVNQSKLARAPAAAKNLLSIASD 419
Query: 493 QLCGE--AFRQLEWMV 534
E R+L MV
Sbjct: 420 STTAEPMPIRRLALMV 435
>09_03_0179 - 13131404-13131514,13131834-13131920,13132316-13132448,
13133079-13133319,13133423-13133540,13133546-13133731,
13133864-13134049,13134443-13134652,13135171-13135347,
13135823-13135964,13136385-13136927,13137565-13138022
Length = 863
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Frame = +1
Query: 205 LT*AGGREITDS---SAVTSLQFR----GSLVQQLRDATKKLGLTIATLHSAVSLLDLFM 363
LT + G E TDS S + SL+F GS L D +K + L + + L
Sbjct: 684 LTVSPGTEGTDSGLASVLNSLEFCLKPCGSEASILEDLSKAINLVHTRRNLVENDRVLLN 743
Query: 364 DAHRLRADRLTHVALACLSLAAKSEDKFSRAPTLKTLSRISGVQLCGEAFRQLEWMVGQ 540
AHR + + VA CL LA + E S + + + Q C E R++ +V +
Sbjct: 744 RAHRAQQE-YERVANYCLKLAGEQEKMVSERWLPELRNAVQEAQRCFEDCRRVRGLVDE 801
>08_02_1018 +
23640889-23641245,23641868-23641954,23642063-23642161,
23642255-23642456,23642569-23642690,23642942-23643226
Length = 383
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +1
Query: 220 GREITDSSAVTSLQFRGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLRADR--L 393
G + L+ R + + + + T + AV+ LD F+ + L R +
Sbjct: 95 GERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWM 154
Query: 394 THV-ALACLSLAAKSED 441
T + ++ACLS+AAK E+
Sbjct: 155 TQLLSVACLSIAAKMEE 171
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 299 VASRSCCTREPRNCSEVTADESVISLPPAQVSSSISHPCTHNGNRHHNQSI 147
+ ++S ++P++C +S I LPP + S ++ P +HN + SI
Sbjct: 483 ILAKSPFFKKPKSCESANKAKSSI-LPPTEESKVVNPPVSHNVTSDRDTSI 532
>09_04_0441 +
17626285-17626620,17626726-17626812,17627195-17627293,
17627431-17627632,17627735-17627832,17628050-17628298
Length = 356
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Frame = +1
Query: 337 AVSLLDLFMDAHRLR--ADRLTHV-ALACLSLAAKSED 441
AV+ LD F+ ++L D +T + A+ACLSLAAK E+
Sbjct: 127 AVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEE 164
>04_01_0341 - 4442727-4445597
Length = 956
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 149 LTDYDDDYHCEYRDEIWKSLLEQEAEK 229
L ++DDY+ Y EIWK L +EAE+
Sbjct: 122 LNIFNDDYY--YSTEIWKDFLPREAEE 146
>09_06_0078 +
20727684-20728036,20728871-20728895,20729218-20729347,
20729441-20729571,20729654-20729742,20730127-20730203,
20730279-20730412
Length = 312
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/114 (21%), Positives = 46/114 (40%)
Frame = +1
Query: 304 KLGLTIATLHSAVSLLDLFMDAHRLRADRLTHVALACLSLAAKSEDKFSRAPTLKTLSRI 483
+LGL A + D +R + ACL +A + ED R T+K + +
Sbjct: 118 RLGLVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQED---RPRTVKEICSV 174
Query: 484 SGVQLCGEAFRQLEWMVGQHVRWRLLXTDSGDIRGTNWLSMLCTDADLDDKGIR 645
+ E R E++V Q + G I ++L C+ ++++ ++
Sbjct: 175 ANGATKKEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVK 228
>10_08_0290 +
16549048-16549262,16549770-16549833,16550106-16550267,
16550786-16550956,16551041-16551235,16551421-16551546,
16551648-16551809,16551953-16552120,16552223-16552435
Length = 491
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 226 EITDSSAVTSLQFRGSLVQQLRD-ATKKLGLTIATLHSAV 342
E+TD ++ L SL +QL+D A K+ G+T L +
Sbjct: 403 EVTDKLSILGLMPMSSLAEQLKDKALKRAGMTAEQLQQMI 442
>09_03_0160 -
12915283-12915453,12915546-12915713,12915944-12915957,
12916051-12916153,12917359-12917445,12917741-12918013
Length = 271
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 310 GLTIATLHSAVSLLDLFMDAHRLRADR---LTHVALACLSLAAKSED 441
G T + AV+ +D F+ L + + +A+ACLSLAAK E+
Sbjct: 97 GFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEE 143
>09_01_0057 - 916973-917287,917371-917495,917587-918241
Length = 364
Score = 28.3 bits (60), Expect = 5.7
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +1
Query: 223 REITDSSAVTSLQFRGSLVQQLRDATKKLGLTIATLHSAVSLLDLFMDAHRLR-ADR--- 390
R D + R + V A +LG + T AV+ LD LR DR
Sbjct: 64 RPAADDDGYGGVSAREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWM 123
Query: 391 LTHVALACLSLAAKSEDKFSRAPTLKTL 474
A+AC++LAAK E+ +R P L L
Sbjct: 124 ARLAAVACVALAAKVEE--TRVPVLLDL 149
>03_05_0329 -
23211636-23211857,23211946-23212079,23212170-23212476,
23212760-23213113
Length = 338
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 400 VALACLSLAAKSEDKFSRAPTLKTLSR---ISGVQLCGEAFRQLEWMVGQHVRWRL 558
+A+AC+SLAAK E+ RAP L G + R++E +V + WR+
Sbjct: 129 LAVACVSLAAKMEE--YRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRM 182
>08_02_1059 + 24006493-24006999
Length = 168
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 638 PLSSKSASVHNILSQLVPRMSPESVHNSLHRTCWPTIHSSCLNASPQ 498
P++++ A+ + S R S E + CWP H C SP+
Sbjct: 67 PVANRFATADSAASTYSSR-SAEDMRRERSEPCWPEEHDGCHGDSPE 112
>05_03_0413 +
13639476-13639537,13639702-13639783,13639865-13639940,
13640016-13640101,13640294-13640370,13641138-13641194,
13641294-13641378,13642331-13642417,13642603-13642683,
13643748-13643885,13643962-13644147,13644242-13644268
Length = 347
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 355 LFMDAHRLRADRLTHVALACLSLAAKSEDK 444
L +D + R R THVA ACL +A + K
Sbjct: 103 LAVDKNFTRGRRTTHVAAACLYIACRQSKK 132
>02_05_0319 - 27872601-27874457
Length = 618
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -3
Query: 341 TAECSVAIVRPNFFVASRSCCTREPRNCSEVTADESVISLPPAQVSSS 198
TA S ++ P V S + R P N S TA S S PP +SS
Sbjct: 207 TAASSPSLPLPTA-VNSTALLARSPTNSSSSTASSSASSSPPISAASS 253
>08_02_1312 +
26055372-26056056,26056935-26057187,26057277-26058081,
26058828-26058952,26059081-26059165,26059473-26059626,
26059724-26059761,26059842-26060109,26060257-26060380,
26060508-26060868,26061904-26062272,26062528-26062609,
26063042-26063193
Length = 1166
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 362 MNKSSKDTAECSVAIVRPNFFVASRSCCTREPRNCSEVTADESVISLPPAQVSSSISHP 186
+ KS+ ++ A + VAS SC R R C EV A +V+ P VS + P
Sbjct: 9 LRKSASSSSSSPYARSTDDGPVASASCDARLERCCREVGAAVAVVEEPERVVSGGGALP 67
>01_06_1480 -
37660591-37660720,37660899-37660930,37661061-37661155,
37661460-37661527,37661608-37661694,37662884-37662912,
37663019-37663138,37663854-37663905,37663986-37664050,
37664174-37664536,37664637-37664711,37664803-37664940,
37665025-37665181,37665471-37665478,37665576-37665710,
37665965-37666082,37666791-37666915,37667571-37667717,
37668297-37668380,37668671-37668800,37669196-37669347,
37669678-37669857,37670660-37670731,37671104-37671295,
37671366-37671411,37671498-37671647,37671725-37671882,
37671995-37672101,37672191-37672407,37672484-37672696,
37672852-37672972,37673072-37673253,37673475-37673672,
37674770-37674967
Length = 1447
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 641 MPLSSKSASVHNILSQLV-PRMSPESVHNSLHRTCWPTIHSSCLNASPQSWTPLILDRVF 465
MP S + A V + +L PR+ +++ L + ++ SSCLN S + P ++R F
Sbjct: 1 MPASPEQA-VREVGKRLAQPRLGKDALVKLLKASSVASLVSSCLNRSKSTALPFPVERCF 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,694,878
Number of Sequences: 37544
Number of extensions: 355130
Number of successful extensions: 1096
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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