Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060103.seq
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.8  
AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.      24   4.9  
Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.       23   6.4  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   6.4  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   6.4  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   8.5  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   8.5  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 155  DYDDDYHCEYRDEIWKSLLEQEA 223
            DYDD+ H +Y  +I +S +  E+
Sbjct: 2500 DYDDESHAKYVSDIGRSKMLNES 2522


>AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.
          Length = 73

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 32  GEMETLNMAKLNLSSVRPHASTESGPKVEVADPKM 136
           G++ T +    +  S++PH+S+ S    E  DP +
Sbjct: 28  GDVPTYDEEDFDEESLKPHSSSSSDDGEEEFDPSL 62


>Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.
          Length = 101

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 32  GEMETLNMAKLNLSSVRPHASTESGPKVEVADPKM 136
           G++ T +    +  S++PH+S+ S    E  DP +
Sbjct: 28  GDVPTYDEEDFDEESLKPHSSSPSDDGEEEFDPSL 62


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -3

Query: 359 NKSSKDTAECSVAIVRPNFFVASRSCCTREPRNCS 255
           ++ ++D  + ++++ R N  + SRS      R+CS
Sbjct: 256 DRLTEDDEDENISVTRTNSTIRSRSSSLSRSRSCS 290


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 535 GQHVRWRLLXTDSGDIR 585
           G+H  +R+L T +G+IR
Sbjct: 538 GEHKAYRMLNTQTGEIR 554


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 276 STTTS*CHKEIRPDYCYTAL 335
           +TTTS CH  + P    T L
Sbjct: 95  TTTTSTCHSHLLPSLAITGL 114


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 276 STTTS*CHKEIRPDYCYTAL 335
           +TTTS CH  + P    T L
Sbjct: 95  TTTTSTCHSHLLPSLAITGL 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,358
Number of Sequences: 2352
Number of extensions: 12938
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)