Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060102.seq
         (679 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK001908-1|BAA91973.1|  684|Homo sapiens protein ( Homo sapiens ...    75   2e-13

>AK001908-1|BAA91973.1|  684|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11046 fis, clone PLACE1004473. ).
          Length = 684

 Score = 75.4 bits (177), Expect = 2e-13
 Identities = 32/81 (39%), Positives = 50/81 (61%)
 Frame = +1

Query: 259 LTKGKKIPVSLRPDVWLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEED 438
           + +G+ +P  LR  VW + LN    G+ L  +D I DLP QN +  D  +F+++L   E+
Sbjct: 39  IIQGRPLPADLRAKVWKIALNVAGKGDCLASWDGILDLPEQNTIHKDCLQFIDQLSVPEE 98

Query: 439 DKLAVISDVESIITFYCKSKN 501
               ++ D+ES+ITFYCKS+N
Sbjct: 99  KAAELLLDIESVITFYCKSRN 119



 Score = 37.9 bits (84), Expect = 0.033
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 507 FTSNNGWIDIXXXXXXXXXXRSDTYNLFERILKLDTPKGCSKNGVPCHILRLI 665
           ++++  WI +          RSD YN F  I+    P+ CS+ G P H  RL+
Sbjct: 122 YSTSLSWIHLLKPLVHLQLPRSDLYNCFYAIMNKYIPRDCSQKGRPFHPFRLL 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,553,707
Number of Sequences: 237096
Number of extensions: 1692992
Number of successful extensions: 10574
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 10524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10574
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)