Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060102.seq
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119443-1|AAM50097.1|  689|Drosophila melanogaster AT03044p pro...   110   2e-24
AE014134-204|AAF51416.2|  689|Drosophila melanogaster CG4552-PA ...   110   2e-24

>AY119443-1|AAM50097.1|  689|Drosophila melanogaster AT03044p
           protein.
          Length = 689

 Score =  110 bits (264), Expect = 2e-24
 Identities = 43/83 (51%), Positives = 70/83 (84%)
 Frame = +1

Query: 253 YALTKGKKIPVSLRPDVWLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNE 432
           Y + +GK +P +LRPDVW +CL+ +   +Q+ LF+EI+DLP Q++LR+D ++ V+++GN+
Sbjct: 24  YGICQGKALPEALRPDVWQVCLDVRHKSDQMSLFNEIYDLPFQSQLREDCQRHVDRMGND 83

Query: 433 EDDKLAVISDVESIITFYCKSKN 501
           E+DK++V+SD+ESIITFYCK++N
Sbjct: 84  EEDKVSVVSDLESIITFYCKNRN 106



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +3

Query: 507 FTSNNGWIDIXXXXXXXXXXRSDTYNLFERILKLDTPKGCSKNGVPCHILRLI 665
           +  +NGWI++          RSDT+NLFE I     PKGC   G   H+ RL+
Sbjct: 109 YEPDNGWIELLLPLFALKLNRSDTFNLFESIRDTYIPKGCRPKGNVFHVFRLL 161



 Score = 34.7 bits (76), Expect = 0.12
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 188 DDDTWLIELESALLDGCTAQEI 253
           +++ W+IELESALLD CT  +I
Sbjct: 2   EENMWIIELESALLDDCTVNDI 23


>AE014134-204|AAF51416.2|  689|Drosophila melanogaster CG4552-PA
           protein.
          Length = 689

 Score =  110 bits (264), Expect = 2e-24
 Identities = 43/83 (51%), Positives = 70/83 (84%)
 Frame = +1

Query: 253 YALTKGKKIPVSLRPDVWLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNE 432
           Y + +GK +P +LRPDVW +CL+ +   +Q+ LF+EI+DLP Q++LR+D ++ V+++GN+
Sbjct: 24  YGICQGKALPEALRPDVWQVCLDVRHKSDQMSLFNEIYDLPFQSQLREDCQRHVDRMGND 83

Query: 433 EDDKLAVISDVESIITFYCKSKN 501
           E+DK++V+SD+ESIITFYCK++N
Sbjct: 84  EEDKVSVVSDLESIITFYCKNRN 106



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = +3

Query: 507 FTSNNGWIDIXXXXXXXXXXRSDTYNLFERILKLDTPKGCSKNGVPCHILRLI 665
           +  +NGWI++          RSDT+NLFE I     PKGC   G   H+ RL+
Sbjct: 109 YEPDNGWIELLLPLFALKLNRSDTFNLFESIRDTYIPKGCRPKGNVFHVFRLL 161



 Score = 34.7 bits (76), Expect = 0.12
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 188 DDDTWLIELESALLDGCTAQEI 253
           +++ W+IELESALLD CT  +I
Sbjct: 2   EENMWIIELESALLDDCTVNDI 23


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,858,854
Number of Sequences: 53049
Number of extensions: 499554
Number of successful extensions: 1232
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)