Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060100.seq
(670 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 350 4e-97
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 347 4e-96
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 347 5e-96
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 347 5e-96
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 347 5e-96
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 345 2e-95
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 344 3e-95
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 343 5e-95
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 343 7e-95
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 170 8e-43
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 170 8e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 169 1e-42
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 167 4e-42
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 167 4e-42
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 165 2e-41
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 165 2e-41
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 141 4e-34
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 140 6e-34
At3g06520.1 68416.m00756 agenet domain-containing protein contai... 32 0.40
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 32 0.40
At4g37190.1 68417.m05265 expressed protein 31 0.92
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 30 1.6
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 3.7
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 29 3.7
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 29 3.7
At5g24010.1 68418.m02821 protein kinase family protein contains ... 28 4.9
At5g26180.2 68418.m03115 NOL1/NOP2/sun family protein similar to... 28 6.5
At5g26180.1 68418.m03114 NOL1/NOP2/sun family protein similar to... 28 6.5
At4g36610.1 68417.m05196 hydrolase, alpha/beta fold family prote... 28 6.5
At4g38400.1 68417.m05428 expansin family protein (EXPL2) contain... 27 8.5
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.5
At2g39200.1 68415.m04815 seven transmembrane MLO family protein ... 27 8.5
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 350 bits (861), Expect = 4e-97
Identities = 161/199 (80%), Positives = 177/199 (88%), Gaps = 1/199 (0%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 240
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 241 RAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDV 420
L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQ GAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 421 VRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTV 600
VRKEAE+CDCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 601 VEPYNATLSVHQLVENTDE 657
VEPYNATLSVHQLVEN DE
Sbjct: 181 VEPYNATLSVHQLVENADE 199
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 347 bits (853), Expect = 4e-96
Identities = 162/199 (81%), Positives = 175/199 (87%), Gaps = 1/199 (0%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQV 240
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 241 RAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDV 420
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQ GAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 421 VRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTV 600
VRKEAE+CDCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 601 VEPYNATLSVHQLVENTDE 657
VEPYNATLSVHQLVEN DE
Sbjct: 181 VEPYNATLSVHQLVENADE 199
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 347 bits (852), Expect = 5e-96
Identities = 161/198 (81%), Positives = 173/198 (87%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 243
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 244 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 423
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQ GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 424 RKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 603
RKEAE+CDCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 604 EPYNATLSVHQLVENTDE 657
EPYNATLSVHQLVEN DE
Sbjct: 181 EPYNATLSVHQLVENADE 198
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 347 bits (852), Expect = 5e-96
Identities = 161/198 (81%), Positives = 173/198 (87%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 243
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 244 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 423
L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQ GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 424 RKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 603
RKEAE+CDCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 604 EPYNATLSVHQLVENTDE 657
EPYNATLSVHQLVEN DE
Sbjct: 181 EPYNATLSVHQLVENADE 198
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 347 bits (852), Expect = 5e-96
Identities = 159/198 (80%), Positives = 175/198 (88%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 243
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 244 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 423
L+DLEPGTMDSVR+GP+GQIFRPDNFVFGQ GAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 424 RKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 603
RKEAE+CDCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 604 EPYNATLSVHQLVENTDE 657
EPYNATLSVHQLVEN DE
Sbjct: 181 EPYNATLSVHQLVENADE 198
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 345 bits (847), Expect = 2e-95
Identities = 161/198 (81%), Positives = 173/198 (87%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 243
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 244 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 423
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQ GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 424 RKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 603
RKEAE+CDCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 604 EPYNATLSVHQLVENTDE 657
EPYNATLSVHQLVEN DE
Sbjct: 181 EPYNATLSVHQLVENADE 198
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 344 bits (846), Expect = 3e-95
Identities = 159/198 (80%), Positives = 173/198 (87%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 243
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 244 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 423
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQ GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 424 RKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 603
RKEAE+CDCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 604 EPYNATLSVHQLVENTDE 657
EPYNATLSVHQLVEN DE
Sbjct: 181 EPYNATLSVHQLVENADE 198
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 343 bits (844), Expect = 5e-95
Identities = 159/198 (80%), Positives = 174/198 (87%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 243
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 244 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 423
L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQ GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 424 RKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 603
RKEAE+CDCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 604 EPYNATLSVHQLVENTDE 657
EPYNATLSVHQLVEN DE
Sbjct: 181 EPYNATLSVHQLVENADE 198
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 343 bits (843), Expect = 7e-95
Identities = 161/198 (81%), Positives = 173/198 (87%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVR 243
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 244 APRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVLDVV 423
L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQ GAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 424 RKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 603
RKEAE+ DCLQGFQ+ HSLGG G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 604 EPYNATLSVHQLVENTDE 657
EPYNATLSVHQLVEN DE
Sbjct: 181 EPYNATLSVHQLVENADE 198
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 170 bits (413), Expect = 8e-43
Identities = 84/200 (42%), Positives = 124/200 (62%), Gaps = 3/200 (1%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 237
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 238 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVL 414
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
Query: 415 DVVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSD 594
D VRK A++C LQGF + +++GG G LL+ ++ +Y + +++ PSP+VS
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Query: 595 TVVEPYNATLSVHQLVENTD 654
VVEPYN+ LS H L+E+TD
Sbjct: 180 AVVEPYNSVLSTHSLLEHTD 199
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 170 bits (413), Expect = 8e-43
Identities = 84/200 (42%), Positives = 124/200 (62%), Gaps = 3/200 (1%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 237
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 238 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVL 414
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
Query: 415 DVVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSD 594
D VRK A++C LQGF + +++GG G LL+ ++ +Y + +++ PSP+VS
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Query: 595 TVVEPYNATLSVHQLVENTD 654
VVEPYN+ LS H L+E+TD
Sbjct: 180 AVVEPYNSVLSTHSLLEHTD 199
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 169 bits (412), Expect = 1e-42
Identities = 83/200 (41%), Positives = 125/200 (62%), Gaps = 3/200 (1%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 237
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S GQ
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 238 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVL 414
PR + +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L
Sbjct: 61 -HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCL 119
Query: 415 DVVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSD 594
+ +RK A++C LQGF + +++GG G LL+ ++ ++ + +++ PSP+VS
Sbjct: 120 ERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVST 179
Query: 595 TVVEPYNATLSVHQLVENTD 654
VVEPYN+ LS H L+E+TD
Sbjct: 180 AVVEPYNSVLSTHSLLEHTD 199
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 167 bits (407), Expect = 4e-42
Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 3/200 (1%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 237
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVL 414
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 415 DVVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSD 594
D +RK A++C LQGF + +++GG G LL+ ++ +Y + ++V PSP+VS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 595 TVVEPYNATLSVHQLVENTD 654
+VVEPYN+ LS H L+E+TD
Sbjct: 180 SVVEPYNSVLSTHSLLEHTD 199
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 167 bits (407), Expect = 4e-42
Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 3/200 (1%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 237
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVL 414
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 415 DVVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSD 594
D +RK A++C LQGF + +++GG G LL+ ++ +Y + ++V PSP+VS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 595 TVVEPYNATLSVHQLVENTD 654
+VVEPYN+ LS H L+E+TD
Sbjct: 180 SVVEPYNSVLSTHSLLEHTD 199
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 83/200 (41%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 237
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVL 414
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 415 DVVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSD 594
D +RK A++C LQGF + +++GG G LL+ ++ +Y + ++V PSP+VS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 595 TVVEPYNATLSVHQLVENTD 654
+VVEPYN+ LS H L+E+TD
Sbjct: 180 SVVEPYNSVLSTHSLLEHTD 199
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 165 bits (401), Expect = 2e-41
Identities = 83/200 (41%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQ 237
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 238 VRAPRHL-VDLEPGTMDSVRSGPFGQIFRPDNFVFGQXGAGNNWAKGHYTEGAELVDSVL 414
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD L
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 415 DVVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSD 594
D +RK A++C LQGF + +++GG G LL+ ++ +Y + ++V PSP+VS
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 595 TVVEPYNATLSVHQLVENTD 654
+VVEPYN+ LS H L+E+TD
Sbjct: 180 SVVEPYNSVLSTHSLLEHTD 199
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 141 bits (341), Expect = 4e-34
Identities = 69/199 (34%), Positives = 114/199 (57%), Gaps = 3/199 (1%)
Frame = +1
Query: 67 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 246
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 247 PRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--XGAGNNWAKGHYTEGAELVDSVLDV 420
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 421 VRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSP-KVSDT 597
+ +EA+ D L+GF L HS+ G G L+ + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 598 VVEPYNATLSVHQLVENTD 654
VV+PYN+ L++ +L N D
Sbjct: 182 VVQPYNSLLTLKRLTLNAD 200
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 140 bits (340), Expect = 6e-34
Identities = 69/199 (34%), Positives = 114/199 (57%), Gaps = 3/199 (1%)
Frame = +1
Query: 67 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRA 246
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 247 PRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--XGAGNNWAKGHYTEGAELVDSVLDV 420
L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 421 VRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSP-KVSDT 597
+ +EA+ D L+GF L HS+ G G L+ + + Y +++ TYSV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 598 VVEPYNATLSVHQLVENTD 654
VV+PYN+ L++ +L N D
Sbjct: 182 VVQPYNSLLTLKRLTLNAD 200
>At3g06520.1 68416.m00756 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 466
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 605 STTVSDTLGDGTTEY-VFIILSGYSSLILEMRRGPYRNW 492
++ VS LG G+ +Y VFII +G + IL P+++W
Sbjct: 258 TSRVSKVLGGGSNKYSVFIISTGEETTILNFNLRPHKDW 296
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +1
Query: 397 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISK----IREEYPDRIMNTY 564
+++SV VVRKEAE+C+CLQ F ++ S F+ + K RE D + Y
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGS------FKVDSVEAKKKEENFRETLRDMANSKY 53
Query: 565 SVVPSPKVSDTVVEP 609
V S ++ D V+ P
Sbjct: 54 EYVKSFELEDEVMLP 68
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 64 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 153
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = -2
Query: 246 GTYLPAGGFIVVYIDALQLQVRVPMVSTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFP 67
G + AGGF + I + + ++ VP + G VL+GD DL A L + FP
Sbjct: 132 GFHKAAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFP 190
Query: 66 HFVLFM*TINYLTLKIXP 13
+L + TL I P
Sbjct: 191 DGILINGRGSGATLNIEP 208
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 472 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 359
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -2
Query: 369 GPVVTGAXLSEDEVVRTEDLSERSRADRVHGAGLQVDE-VARGTYLPAGGFI---VVYID 202
GP TG +LSER R DR++ + E + + + + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 201 ALQLQVRVPMVSTG 160
+LQLQV++ +++G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -2
Query: 369 GPVVTGAXLSEDEVVRTEDLSERSRADRVHGAGLQVDE-VARGTYLPAGGFI---VVYID 202
GP TG +LSER R DR++ + E + + + + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 201 ALQLQVRVPMVSTG 160
+LQLQV++ +++G
Sbjct: 391 SLQLQVQIMSMASG 404
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 479 SECVSWNPWRQSHDSASFRTTSKTESTS 396
SE W P R+ S++ RTT +T S+S
Sbjct: 443 SESTGWTPLRRFRGSSNSRTTERTVSSS 470
>At5g26180.2 68418.m03115 NOL1/NOP2/sun family protein similar to
NOL1R [Homo sapiens] GI:16226071; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 567
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +1
Query: 418 VVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDT 597
+VRK+ +S D L G +LT L + R L + + + Y+V V D
Sbjct: 210 LVRKKVDSVDQLLGSKLTGHLKPRY-VRVNTLKMDV--DSAVQELEKHYTVQKDETVPDL 266
Query: 598 VVEPYNATLSVHQLVEN 648
+V P + L H+LV N
Sbjct: 267 LVLPPGSDLHAHRLVAN 283
>At5g26180.1 68418.m03114 NOL1/NOP2/sun family protein similar to
NOL1R [Homo sapiens] GI:16226071; contains Pfam profile
PF01189: NOL1/NOP2/sun family
Length = 567
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +1
Query: 418 VVRKEAESCDCLQGFQLTHSLGGXHQFRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDT 597
+VRK+ +S D L G +LT L + R L + + + Y+V V D
Sbjct: 210 LVRKKVDSVDQLLGSKLTGHLKPRY-VRVNTLKMDV--DSAVQELEKHYTVQKDETVPDL 266
Query: 598 VVEPYNATLSVHQLVEN 648
+V P + L H+LV N
Sbjct: 267 LVLPPGSDLHAHRLVAN 283
>At4g36610.1 68417.m05196 hydrolase, alpha/beta fold family protein
low similarity to
2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase
[Pseudomonas fluorescens] GI:1871461; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 317
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 496 FRYGPLLISKIREEYPDRIMNTYSVVPSPKVSDTVVE 606
F YG ++ KI E YPD + P ++DT+ E
Sbjct: 134 FSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDTINE 170
>At4g38400.1 68417.m05428 expansin family protein (EXPL2) contains
Pfam profile: PF01357 pollen allergen; expansin-like
gene, PMID:11641069, www.bio.psu.edu/expansins
Length = 265
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = -3
Query: 611 YGSTTVSDTLGDGTTEYVFIILSGYSSLILEMRRGPYRNW 492
+G+ V+D + +G ++ F++ +GY ++ +R NW
Sbjct: 197 HGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANW 236
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 70 EIVHIQAGQCGNQIGAKFWEIISD 141
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At2g39200.1 68415.m04815 seven transmembrane MLO family protein /
MLO-like protein 12 (MLO12) identical to SP|O80961
MLO-like protein 12 (AtMlo12) {Arabidopsis thaliana},
membrane protein Mlo12 [Arabidopsis thaliana]
gi|14091594|gb|AAK53805; similar to MLO protein
SWISS-PROT:P93766, NCBI_gi:1877221 [Hordeum
vulgare][Barley]
Length = 576
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -3
Query: 554 IILSGYSSLILEMRRGPYRNWCXPPSECVSWNPWRQSHDSASF 426
++L G+ SL+L + + P C P + +W+P + A +
Sbjct: 60 LMLLGFISLLLVVLQTPVSEICIPRNIAATWHPCSNHQEIAKY 102
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,260,046
Number of Sequences: 28952
Number of extensions: 297181
Number of successful extensions: 894
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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