Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060099.seq
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U76378-1|AAB18789.1| 1150|Drosophila melanogaster LK6 protein ki...    56   3e-08
AE014297-1373|AAF54695.1| 1090|Drosophila melanogaster CG17342-P...    56   3e-08
AE014297-1372|AAF54694.1| 1142|Drosophila melanogaster CG17342-P...    56   3e-08

>U76378-1|AAB18789.1| 1150|Drosophila melanogaster LK6 protein
           kinase protein.
          Length = 1150

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 30/64 (46%), Positives = 43/64 (67%)
 Frame = +3

Query: 477 QEASQEEAFWNSVVTSCFQDLYKLTGEVLGEGAYASVQNVRXHLHGARVRCERSSDKIXG 656
           Q+  +++   +S+ +S FQ+LYKLTGE+LGEGAYASVQ    +++       +  DKI G
Sbjct: 96  QKKRRKKRISSSLHSSTFQELYKLTGEILGEGAYASVQTC-VNIYTDLEYAVKVIDKIPG 154

Query: 657 HARA 668
           HARA
Sbjct: 155 HARA 158


>AE014297-1373|AAF54695.1| 1090|Drosophila melanogaster CG17342-PB,
           isoform B protein.
          Length = 1090

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 30/64 (46%), Positives = 43/64 (67%)
 Frame = +3

Query: 477 QEASQEEAFWNSVVTSCFQDLYKLTGEVLGEGAYASVQNVRXHLHGARVRCERSSDKIXG 656
           Q+  +++   +S+ +S FQ+LYKLTGE+LGEGAYASVQ    +++       +  DKI G
Sbjct: 44  QKKRRKKRISSSLHSSTFQELYKLTGEILGEGAYASVQTC-VNIYTDLEYAVKVIDKIPG 102

Query: 657 HARA 668
           HARA
Sbjct: 103 HARA 106


>AE014297-1372|AAF54694.1| 1142|Drosophila melanogaster CG17342-PA,
           isoform A protein.
          Length = 1142

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 30/64 (46%), Positives = 43/64 (67%)
 Frame = +3

Query: 477 QEASQEEAFWNSVVTSCFQDLYKLTGEVLGEGAYASVQNVRXHLHGARVRCERSSDKIXG 656
           Q+  +++   +S+ +S FQ+LYKLTGE+LGEGAYASVQ    +++       +  DKI G
Sbjct: 96  QKKRRKKRISSSLHSSTFQELYKLTGEILGEGAYASVQTC-VNIYTDLEYAVKVIDKIPG 154

Query: 657 HARA 668
           HARA
Sbjct: 155 HARA 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,341,058
Number of Sequences: 53049
Number of extensions: 460389
Number of successful extensions: 1315
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)