Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060098.seq
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.0  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   5.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   5.3  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   7.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   7.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 471 LKFVWWLPAIPFICPSS 521
           LK VW+L  +  +CP S
Sbjct: 10  LKHVWFLSKLFLLCPRS 26


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 509 DERNGGQPP 483
           DER+GG+PP
Sbjct: 34  DERDGGKPP 42


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 509 DERNGGQPP 483
           DER+GG+PP
Sbjct: 190 DERDGGKPP 198


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +3

Query: 657 FWGCWN 674
           FW CWN
Sbjct: 111 FWNCWN 116


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +3

Query: 657 FWGCWN 674
           FW CWN
Sbjct: 111 FWNCWN 116


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -2

Query: 192 LLPDTEKLHREESVFSHDHEVDEEASRGLDHSDLSVSHRDQPLV 61
           LLP  E L   E     D  V+   +    HS   + +   PLV
Sbjct: 91  LLPPLESLATVEETVVRDKAVESLRAVAQQHSPADLENHFVPLV 134


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 404 KYETKVEGPVAHALVNDRVTAGLADNQVGPLHNDNR 297
           +YE K EGP     + +      A+ +  P H D R
Sbjct: 629 EYEAKEEGPKVVCYMTNWAFYRKAEGKFVPEHIDQR 664


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,376
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)