Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060098.seq
(676 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 26 1.3
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 25 1.7
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 25 1.7
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 24 5.0
AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 24 5.0
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 24 5.0
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 24 5.0
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 24 5.0
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 24 5.0
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 24 5.0
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 24 5.0
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 24 5.0
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 24 5.0
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 24 5.0
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 24 5.0
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 24 5.0
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 24 5.0
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 24 5.0
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 607 DRRCLIISLLFEPAAGVAAQVEAPDLVV 524
DR CLII F A +A AP ++V
Sbjct: 505 DRLCLIIFTFFTIVATIAVLFSAPHIIV 532
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 219 QIVDGLRVPLLPDTEKLHREESVFSHDHEVDEEAS 115
Q++ +R PLL D EKL + + + + D E+S
Sbjct: 30 QLLPAVRRPLLSDAEKLEQRLLAPNRNADFDNESS 64
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 25.4 bits (53), Expect = 1.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 607 DRRCLIISLLFEPAAGVAAQVEAPDLVV 524
DR CLII LF A +A AP +V
Sbjct: 481 DRLCLIIFTLFTIIATLAVLFSAPHFIV 508
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 354 IIHQGMRNWALNFGL 398
I H +RNWA+ FG+
Sbjct: 45 IPHNEVRNWAIRFGV 59
>AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced
homeotic protein protein.
Length = 372
Score = 23.8 bits (49), Expect = 5.0
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -3
Query: 512 TDERNGGQPPHELEW---VH-PQALVHTGSVREERRQRGFKYET 393
+ + GG PPH W VH Q+ V+ + +R +Y+T
Sbjct: 249 SSSKKGGPPPHIYPWMKRVHIGQSTVNANGETKRQRTSYTRYQT 292
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 80 IIKSVEHHAPANYEFSYSVHDEHTG 104
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 72 IIKSVEHHAPANYEFSYSVHDEHTG 96
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 72 IIKSVEHHAPANYEFSYSVHDEHTG 96
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 72 IIKSVEHHAPANYEFSYSVHDEHTG 96
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 80 IIKSVEHHAPANYEFSYSVHDEHTG 104
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 72 IIKSVEHHAPANYEFSYSVHDEHTG 96
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 80 IIKSVEHHAPANYEFSYSVHDEHTG 104
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 104 IIKSVEHHAPANYEFSYSVHDEHTG 128
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 72 IIKSVEHHAPANYEFSYSVHDEHTG 96
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 80 IIKSVEHHAPANYEFSYSVHDEHTG 104
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 72 IIKSVEHHAPANYEFSYSVHDEHTG 96
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 80 IIKSVEHHAPANYEFSYSVHDEHTG 104
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 23.8 bits (49), Expect = 5.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 589 LLNSADHCPPSXIKLSHRVHNVHFG 663
++ S +H P+ + S+ VH+ H G
Sbjct: 72 IIKSVEHHAPANYEFSYSVHDEHTG 96
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,906
Number of Sequences: 2352
Number of extensions: 15760
Number of successful extensions: 44
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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