Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060098.seq
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical pr... 141 4e-34
U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alp... 141 4e-34
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p... 112 2e-25
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical... 40 0.002
AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 39 0.004
AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 36 0.020
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 34 0.081
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 34 0.081
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 29 2.3
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 4.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 4.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 4.0
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 28 7.0
AF043702-4|AAK21494.2| 430|Caenorhabditis elegans Hypothetical ... 28 7.0
AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical ... 28 7.0
>Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical protein
B0365.3 protein.
Length = 996
Score = 141 bits (342), Expect = 4e-34
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +3
Query: 255 RKALEFTCHTAFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSY 434
RK LE+TC TA+FVSIVVVQWADLII KTRRNS++ QGM NW LNFGL+FETALA F+ Y
Sbjct: 884 RKILEYTCQTAYFVSIVVVQWADLIISKTRRNSLVQQGMSNWTLNFGLVFETALAWFMCY 943
Query: 435 TPGMDKGLRMYPLKFVWWLPAIPF 506
PG+D GLRMY L+F WW A+PF
Sbjct: 944 CPGLDNGLRMYGLRFSWWFCALPF 967
Score = 141 bits (341), Expect = 5e-34
Identities = 66/100 (66%), Positives = 80/100 (80%)
Frame = +1
Query: 10 SDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRK 189
SDIMKRQPR+P DKLVNERLIS+AYGQIGMIQA+AGFF YF IMA+NGF+P L+ +R
Sbjct: 802 SDIMKRQPRDPIRDKLVNERLISLAYGQIGMIQASAGFFTYFWIMADNGFMPWDLYQLRA 861
Query: 190 QWDSKAINDLTDSYGQEWTYRDARRSSLLATPHSSYLLSL 309
QWDS+A N++ DSYGQEWTY A R L T ++Y +S+
Sbjct: 862 QWDSRAYNNVLDSYGQEWTY--ANRKILEYTCQTAYFVSI 899
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 515 IFIYDEIRRFYLRRNPGGWLEQETYY 592
IF+YDEIRRF +RR PGGW+E+ETYY
Sbjct: 971 IFVYDEIRRFLIRRYPGGWVERETYY 996
>U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alpha
subunit protein.
Length = 996
Score = 141 bits (342), Expect = 4e-34
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +3
Query: 255 RKALEFTCHTAFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSY 434
RK LE+TC TA+FVSIVVVQWADLII KTRRNS++ QGM NW LNFGL+FETALA F+ Y
Sbjct: 884 RKILEYTCQTAYFVSIVVVQWADLIISKTRRNSLVQQGMSNWTLNFGLVFETALAWFMCY 943
Query: 435 TPGMDKGLRMYPLKFVWWLPAIPF 506
PG+D GLRMY L+F WW A+PF
Sbjct: 944 CPGLDNGLRMYGLRFSWWFCALPF 967
Score = 141 bits (341), Expect = 5e-34
Identities = 66/100 (66%), Positives = 80/100 (80%)
Frame = +1
Query: 10 SDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRK 189
SDIMKRQPR+P DKLVNERLIS+AYGQIGMIQA+AGFF YF IMA+NGF+P L+ +R
Sbjct: 802 SDIMKRQPRDPIRDKLVNERLISLAYGQIGMIQASAGFFTYFWIMADNGFMPWDLYQLRA 861
Query: 190 QWDSKAINDLTDSYGQEWTYRDARRSSLLATPHSSYLLSL 309
QWDS+A N++ DSYGQEWTY A R L T ++Y +S+
Sbjct: 862 QWDSRAYNNVLDSYGQEWTY--ANRKILEYTCQTAYFVSI 899
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 515 IFIYDEIRRFYLRRNPGGWLEQETYY 592
IF+YDEIRRF +RR PGGW+E+ETYY
Sbjct: 971 IFVYDEIRRFLIRRYPGGWVERETYY 996
>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical protein
C01G12.8 protein.
Length = 1049
Score = 112 bits (270), Expect = 2e-25
Identities = 49/84 (58%), Positives = 61/84 (72%)
Frame = +1
Query: 10 SDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRK 189
SDIM+R PRNP DKLVN+RL+ +Y QIG IQA AGF YFV+M NG+ P L I +
Sbjct: 855 SDIMQRAPRNPLYDKLVNKRLVMFSYMQIGAIQACAGFTTYFVLMMSNGWFPQDLLNISE 914
Query: 190 QWDSKAINDLTDSYGQEWTYRDAR 261
QWD+K I+DL DSYGQ+W+Y +
Sbjct: 915 QWDNKYIDDLEDSYGQQWSYESRK 938
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 255 RKALEFTCHTAFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSY 434
RKALE C+ FF +IVV QW+DL KTR+NS++ QGM N LN +IF LA F+
Sbjct: 937 RKALESCCYGTFFFTIVVTQWSDLFASKTRKNSLVMQGMENHVLNTSVIFTCFLAIFVLN 996
Query: 435 TPGMDKGLRMYPLKFVWWLPAIPF 506
TP +++ L + + A+PF
Sbjct: 997 TPFVNEVLGVQGFRLEIGFLALPF 1020
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +2
Query: 515 IFIYDEIRRFYLRRNPGGWLEQETYY 592
I +YDE+RR+++R PGG++ +ETYY
Sbjct: 1024 IGLYDEVRRYFIRTYPGGYIYKETYY 1049
>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
protein C01G12.8 protein.
Length = 1049
Score = 112 bits (270), Expect = 2e-25
Identities = 49/84 (58%), Positives = 61/84 (72%)
Frame = +1
Query: 10 SDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRK 189
SDIM+R PRNP DKLVN+RL+ +Y QIG IQA AGF YFV+M NG+ P L I +
Sbjct: 855 SDIMQRAPRNPLYDKLVNKRLVMFSYMQIGAIQACAGFTTYFVLMMSNGWFPQDLLNISE 914
Query: 190 QWDSKAINDLTDSYGQEWTYRDAR 261
QWD+K I+DL DSYGQ+W+Y +
Sbjct: 915 QWDNKYIDDLEDSYGQQWSYESRK 938
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +3
Query: 255 RKALEFTCHTAFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSY 434
RKALE C+ FF +IVV QW+DL KTR+NS++ QGM N LN +IF LA F+
Sbjct: 937 RKALESCCYGTFFFTIVVTQWSDLFASKTRKNSLVMQGMENHVLNTSVIFTCFLAIFVLN 996
Query: 435 TPGMDKGLRMYPLKFVWWLPAIPF 506
TP +++ L + + A+PF
Sbjct: 997 TPFVNEVLGVQGFRLEIGFLALPF 1020
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +2
Query: 515 IFIYDEIRRFYLRRNPGGWLEQETYY 592
I +YDE+RR+++R PGG++ +ETYY
Sbjct: 1024 IGLYDEVRRYFIRTYPGGYIYKETYY 1049
>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
protein C02E7.1 protein.
Length = 1050
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRM 464
AF +S+V+ Q L +C TRR SI G+ N F +I + L ++ PG+
Sbjct: 948 AFHISLVLGQAFHLWMCLTRRVSIFAHGLGNIVAIFAVIIDLLLICIFTFVPGVKYIFGS 1007
Query: 465 YPLKFVWWLPAI 500
P + WL I
Sbjct: 1008 QPPPWQCWLVPI 1019
>AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical
protein C09H5.2a protein.
Length = 1054
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +3
Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRM 464
AF +++VV Q L +C TRR SI GM N +I + L ++ PG+
Sbjct: 952 AFHIAVVVGQAWHLWMCLTRRVSIFVHGMANIVAILAVIIDLLLICLFTFVPGVQYVFGS 1011
Query: 465 YPLKFVWWL 491
P + WL
Sbjct: 1012 QPPPWECWL 1020
>AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical
protein C09H5.2b protein.
Length = 1039
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGM 446
AF +++VV Q L +C TRR SI GM N +I + L ++ PG+
Sbjct: 952 AFHIAVVVGQAWHLWMCLTRRVSIFVHGMANIVAILAVIIDLLLICLFTFVPGV 1005
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 34.3 bits (75), Expect = 0.081
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRM 464
A+ +++V+ Q L C TRR S+ G+ N F +I E L YTP + +
Sbjct: 1019 AWQITLVMSQVFHLYNCTTRRVSVFRHGLTNIVSVFAVIIEILLLFMFVYTPVFQYIMDI 1078
Query: 465 Y-PLKFVWWLPAI 500
+ P VW + I
Sbjct: 1079 HTPPAHVWAIAPI 1091
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 34.3 bits (75), Expect = 0.081
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRM 464
A+ +++V+ Q L C TRR S+ G+ N F +I E L YTP + +
Sbjct: 1019 AWQITLVMSQVFHLYNCTTRRVSVFRHGLTNIVSVFAVIIEILLLFMFVYTPVFQYIMDI 1078
Query: 465 Y-PLKFVWWLPAI 500
+ P VW + I
Sbjct: 1079 HTPPAHVWAIAPI 1091
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = -2
Query: 246 GPFLPIGVSQIVDGLRVPLLPDTEKLHREESVFSHDHEVDEEASRGLDHSDLSVSHRDQP 67
GP P+ + + + + + ++L++ S+ H HE + + + D SV+ P
Sbjct: 419 GPTKPLTLRLGHNEFYISNMSEQDQLNQFSSLEDHHHETPTSSGNEVSNKDQSVNI--PP 476
Query: 66 LVNEFISERVTRLSLH 19
+V+E S R+ RL H
Sbjct: 477 VVDEIRSSRMKRLVNH 492
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 246 GPFLPIGVSQIVDGLRVPLLPDTEKLHREESVFSHDHEVDEEASR 112
G +LP+ S + R+PL D+ ++ +E D E D +SR
Sbjct: 335 GRYLPLEQSYLPRPFRLPLESDSYRVKSDERASMRDREADRTSSR 379
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 246 GPFLPIGVSQIVDGLRVPLLPDTEKLHREESVFSHDHEVDEEASR 112
G +LP+ S + R+PL D+ ++ +E D E D +SR
Sbjct: 335 GRYLPLEQSYLPRPFRLPLESDSYRVKSDERASMRDREADRTSSR 379
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 516 SSSTTRSGASTCAATPAAGSNKRLI 590
+ STTRSG +TC A + GS+++ +
Sbjct: 688 AQSTTRSGVATCQAVNSEGSDEKKV 712
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 516 SSSTTRSGASTCAATPAAGSNKRLI 590
+ STTRSG +TC A + GS+++ +
Sbjct: 751 AQSTTRSGVATCQAVNSEGSDEKKV 775
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 516 SSSTTRSGASTCAATPAAGSNKRLI 590
+ STTRSG +TC A + GS+++ +
Sbjct: 751 AQSTTRSGVATCQAVNSEGSDEKKV 775
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 441 GMDKGLRMYPLKFVWWLPAIPFICPSSSTTRSGAS--TCAATPAAGSNKR 584
G D GL P + W P PSSST+ S +S + ++TP + +R
Sbjct: 103 GRDAGLSANPKRSPRWSPQPDPSTPSSSTSSSTSSSPSSSSTPLTSTQRR 152
>AF043702-4|AAK21494.2| 430|Caenorhabditis elegans Hypothetical
protein W03D8.8 protein.
Length = 430
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 97 GMIQAAAGFFVYFVIMAENGFLPMKLFGIRKQWDSKAINDLTD 225
G + A+ GF V + + +LP K+ + ++ +KAIN L D
Sbjct: 168 GAMLASEGFVVLCLAFFQFKYLPQKMEDVDMEYFAKAINYLID 210
>AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical
protein F12E12.10 protein.
Length = 319
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 245 VHSCP*ESVKSLMAFESHCFLIPKSFI 165
+HS P + +K ++ +HC +IP SFI
Sbjct: 8 IHSLPTKPLKIVLQSFTHCSIIPYSFI 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,027,593
Number of Sequences: 27780
Number of extensions: 346725
Number of successful extensions: 1133
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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