BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060098.seq (676 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical pr... 141 4e-34 U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alp... 141 4e-34 Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr... 112 2e-25 Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p... 112 2e-25 AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical... 40 0.002 AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 39 0.004 AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 36 0.020 AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 34 0.081 AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 34 0.081 U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 30 1.7 Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 29 2.3 Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 29 2.3 U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 4.0 U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 4.0 AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 4.0 Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 28 7.0 AF043702-4|AAK21494.2| 430|Caenorhabditis elegans Hypothetical ... 28 7.0 AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical ... 28 7.0 >Z81028-2|CAB02694.1| 996|Caenorhabditis elegans Hypothetical protein B0365.3 protein. Length = 996 Score = 141 bits (342), Expect = 4e-34 Identities = 61/84 (72%), Positives = 70/84 (83%) Frame = +3 Query: 255 RKALEFTCHTAFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSY 434 RK LE+TC TA+FVSIVVVQWADLII KTRRNS++ QGM NW LNFGL+FETALA F+ Y Sbjct: 884 RKILEYTCQTAYFVSIVVVQWADLIISKTRRNSLVQQGMSNWTLNFGLVFETALAWFMCY 943 Query: 435 TPGMDKGLRMYPLKFVWWLPAIPF 506 PG+D GLRMY L+F WW A+PF Sbjct: 944 CPGLDNGLRMYGLRFSWWFCALPF 967 Score = 141 bits (341), Expect = 5e-34 Identities = 66/100 (66%), Positives = 80/100 (80%) Frame = +1 Query: 10 SDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRK 189 SDIMKRQPR+P DKLVNERLIS+AYGQIGMIQA+AGFF YF IMA+NGF+P L+ +R Sbjct: 802 SDIMKRQPRDPIRDKLVNERLISLAYGQIGMIQASAGFFTYFWIMADNGFMPWDLYQLRA 861 Query: 190 QWDSKAINDLTDSYGQEWTYRDARRSSLLATPHSSYLLSL 309 QWDS+A N++ DSYGQEWTY A R L T ++Y +S+ Sbjct: 862 QWDSRAYNNVLDSYGQEWTY--ANRKILEYTCQTAYFVSI 899 Score = 52.8 bits (121), Expect = 2e-07 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = +2 Query: 515 IFIYDEIRRFYLRRNPGGWLEQETYY 592 IF+YDEIRRF +RR PGGW+E+ETYY Sbjct: 971 IFVYDEIRRFLIRRYPGGWVERETYY 996 >U18546-1|AAB02615.1| 996|Caenorhabditis elegans Na,K-ATPase alpha subunit protein. Length = 996 Score = 141 bits (342), Expect = 4e-34 Identities = 61/84 (72%), Positives = 70/84 (83%) Frame = +3 Query: 255 RKALEFTCHTAFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSY 434 RK LE+TC TA+FVSIVVVQWADLII KTRRNS++ QGM NW LNFGL+FETALA F+ Y Sbjct: 884 RKILEYTCQTAYFVSIVVVQWADLIISKTRRNSLVQQGMSNWTLNFGLVFETALAWFMCY 943 Query: 435 TPGMDKGLRMYPLKFVWWLPAIPF 506 PG+D GLRMY L+F WW A+PF Sbjct: 944 CPGLDNGLRMYGLRFSWWFCALPF 967 Score = 141 bits (341), Expect = 5e-34 Identities = 66/100 (66%), Positives = 80/100 (80%) Frame = +1 Query: 10 SDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRK 189 SDIMKRQPR+P DKLVNERLIS+AYGQIGMIQA+AGFF YF IMA+NGF+P L+ +R Sbjct: 802 SDIMKRQPRDPIRDKLVNERLISLAYGQIGMIQASAGFFTYFWIMADNGFMPWDLYQLRA 861 Query: 190 QWDSKAINDLTDSYGQEWTYRDARRSSLLATPHSSYLLSL 309 QWDS+A N++ DSYGQEWTY A R L T ++Y +S+ Sbjct: 862 QWDSRAYNNVLDSYGQEWTY--ANRKILEYTCQTAYFVSI 899 Score = 52.8 bits (121), Expect = 2e-07 Identities = 20/26 (76%), Positives = 24/26 (92%) Frame = +2 Query: 515 IFIYDEIRRFYLRRNPGGWLEQETYY 592 IF+YDEIRRF +RR PGGW+E+ETYY Sbjct: 971 IFVYDEIRRFLIRRYPGGWVERETYY 996 >Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical protein C01G12.8 protein. Length = 1049 Score = 112 bits (270), Expect = 2e-25 Identities = 49/84 (58%), Positives = 61/84 (72%) Frame = +1 Query: 10 SDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRK 189 SDIM+R PRNP DKLVN+RL+ +Y QIG IQA AGF YFV+M NG+ P L I + Sbjct: 855 SDIMQRAPRNPLYDKLVNKRLVMFSYMQIGAIQACAGFTTYFVLMMSNGWFPQDLLNISE 914 Query: 190 QWDSKAINDLTDSYGQEWTYRDAR 261 QWD+K I+DL DSYGQ+W+Y + Sbjct: 915 QWDNKYIDDLEDSYGQQWSYESRK 938 Score = 73.7 bits (173), Expect = 1e-13 Identities = 37/84 (44%), Positives = 51/84 (60%) Frame = +3 Query: 255 RKALEFTCHTAFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSY 434 RKALE C+ FF +IVV QW+DL KTR+NS++ QGM N LN +IF LA F+ Sbjct: 937 RKALESCCYGTFFFTIVVTQWSDLFASKTRKNSLVMQGMENHVLNTSVIFTCFLAIFVLN 996 Query: 435 TPGMDKGLRMYPLKFVWWLPAIPF 506 TP +++ L + + A+PF Sbjct: 997 TPFVNEVLGVQGFRLEIGFLALPF 1020 Score = 40.3 bits (90), Expect = 0.001 Identities = 14/26 (53%), Positives = 22/26 (84%) Frame = +2 Query: 515 IFIYDEIRRFYLRRNPGGWLEQETYY 592 I +YDE+RR+++R PGG++ +ETYY Sbjct: 1024 IGLYDEVRRYFIRTYPGGYIYKETYY 1049 >Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical protein C01G12.8 protein. Length = 1049 Score = 112 bits (270), Expect = 2e-25 Identities = 49/84 (58%), Positives = 61/84 (72%) Frame = +1 Query: 10 SDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPMKLFGIRK 189 SDIM+R PRNP DKLVN+RL+ +Y QIG IQA AGF YFV+M NG+ P L I + Sbjct: 855 SDIMQRAPRNPLYDKLVNKRLVMFSYMQIGAIQACAGFTTYFVLMMSNGWFPQDLLNISE 914 Query: 190 QWDSKAINDLTDSYGQEWTYRDAR 261 QWD+K I+DL DSYGQ+W+Y + Sbjct: 915 QWDNKYIDDLEDSYGQQWSYESRK 938 Score = 73.7 bits (173), Expect = 1e-13 Identities = 37/84 (44%), Positives = 51/84 (60%) Frame = +3 Query: 255 RKALEFTCHTAFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSY 434 RKALE C+ FF +IVV QW+DL KTR+NS++ QGM N LN +IF LA F+ Sbjct: 937 RKALESCCYGTFFFTIVVTQWSDLFASKTRKNSLVMQGMENHVLNTSVIFTCFLAIFVLN 996 Query: 435 TPGMDKGLRMYPLKFVWWLPAIPF 506 TP +++ L + + A+PF Sbjct: 997 TPFVNEVLGVQGFRLEIGFLALPF 1020 Score = 40.3 bits (90), Expect = 0.001 Identities = 14/26 (53%), Positives = 22/26 (84%) Frame = +2 Query: 515 IFIYDEIRRFYLRRNPGGWLEQETYY 592 I +YDE+RR+++R PGG++ +ETYY Sbjct: 1024 IGLYDEVRRYFIRTYPGGYIYKETYY 1049 >AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical protein C02E7.1 protein. Length = 1050 Score = 39.5 bits (88), Expect = 0.002 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = +3 Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRM 464 AF +S+V+ Q L +C TRR SI G+ N F +I + L ++ PG+ Sbjct: 948 AFHISLVLGQAFHLWMCLTRRVSIFAHGLGNIVAIFAVIIDLLLICIFTFVPGVKYIFGS 1007 Query: 465 YPLKFVWWLPAI 500 P + WL I Sbjct: 1008 QPPPWQCWLVPI 1019 >AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical protein C09H5.2a protein. Length = 1054 Score = 38.7 bits (86), Expect = 0.004 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = +3 Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRM 464 AF +++VV Q L +C TRR SI GM N +I + L ++ PG+ Sbjct: 952 AFHIAVVVGQAWHLWMCLTRRVSIFVHGMANIVAILAVIIDLLLICLFTFVPGVQYVFGS 1011 Query: 465 YPLKFVWWL 491 P + WL Sbjct: 1012 QPPPWECWL 1020 >AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical protein C09H5.2b protein. Length = 1039 Score = 36.3 bits (80), Expect = 0.020 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = +3 Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGM 446 AF +++VV Q L +C TRR SI GM N +I + L ++ PG+ Sbjct: 952 AFHIAVVVGQAWHLWMCLTRRVSIFVHGMANIVAILAVIIDLLLICLFTFVPGV 1005 >AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transporting ATPase protein. Length = 1121 Score = 34.3 bits (75), Expect = 0.081 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +3 Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRM 464 A+ +++V+ Q L C TRR S+ G+ N F +I E L YTP + + Sbjct: 1019 AWQITLVMSQVFHLYNCTTRRVSVFRHGLTNIVSVFAVIIEILLLFMFVYTPVFQYIMDI 1078 Query: 465 Y-PLKFVWWLPAI 500 + P VW + I Sbjct: 1079 HTPPAHVWAIAPI 1091 >AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical protein Y105E8A.12a protein. Length = 1121 Score = 34.3 bits (75), Expect = 0.081 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +3 Query: 285 AFFVSIVVVQWADLIICKTRRNSIIHQGMRNWALNFGLIFETALAAFLSYTPGMDKGLRM 464 A+ +++V+ Q L C TRR S+ G+ N F +I E L YTP + + Sbjct: 1019 AWQITLVMSQVFHLYNCTTRRVSVFRHGLTNIVSVFAVIIEILLLFMFVYTPVFQYIMDI 1078 Query: 465 Y-PLKFVWWLPAI 500 + P VW + I Sbjct: 1079 HTPPAHVWAIAPI 1091 >U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical protein C04E7.4 protein. Length = 542 Score = 29.9 bits (64), Expect = 1.7 Identities = 19/76 (25%), Positives = 37/76 (48%) Frame = -2 Query: 246 GPFLPIGVSQIVDGLRVPLLPDTEKLHREESVFSHDHEVDEEASRGLDHSDLSVSHRDQP 67 GP P+ + + + + + ++L++ S+ H HE + + + D SV+ P Sbjct: 419 GPTKPLTLRLGHNEFYISNMSEQDQLNQFSSLEDHHHETPTSSGNEVSNKDQSVNI--PP 476 Query: 66 LVNEFISERVTRLSLH 19 +V+E S R+ RL H Sbjct: 477 VVDEIRSSRMKRLVNH 492 >Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical protein F54G8.4 protein. Length = 974 Score = 29.5 bits (63), Expect = 2.3 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -2 Query: 246 GPFLPIGVSQIVDGLRVPLLPDTEKLHREESVFSHDHEVDEEASR 112 G +LP+ S + R+PL D+ ++ +E D E D +SR Sbjct: 335 GRYLPLEQSYLPRPFRLPLESDSYRVKSDERASMRDREADRTSSR 379 >Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical protein F54G8.4 protein. Length = 974 Score = 29.5 bits (63), Expect = 2.3 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -2 Query: 246 GPFLPIGVSQIVDGLRVPLLPDTEKLHREESVFSHDHEVDEEASR 112 G +LP+ S + R+PL D+ ++ +E D E D +SR Sbjct: 335 GRYLPLEQSYLPRPFRLPLESDSYRVKSDERASMRDREADRTSSR 379 >U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical protein K07E12.1b protein. Length = 12268 Score = 28.7 bits (61), Expect = 4.0 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +3 Query: 516 SSSTTRSGASTCAATPAAGSNKRLI 590 + STTRSG +TC A + GS+++ + Sbjct: 688 AQSTTRSGVATCQAVNSEGSDEKKV 712 >U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein K07E12.1a protein. Length = 13100 Score = 28.7 bits (61), Expect = 4.0 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +3 Query: 516 SSSTTRSGASTCAATPAAGSNKRLI 590 + STTRSG +TC A + GS+++ + Sbjct: 751 AQSTTRSGVATCQAVNSEGSDEKKV 775 >AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein. Length = 13100 Score = 28.7 bits (61), Expect = 4.0 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +3 Query: 516 SSSTTRSGASTCAATPAAGSNKRLI 590 + STTRSG +TC A + GS+++ + Sbjct: 751 AQSTTRSGVATCQAVNSEGSDEKKV 775 >Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical protein Y57G11C.51 protein. Length = 160 Score = 27.9 bits (59), Expect = 7.0 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = +3 Query: 441 GMDKGLRMYPLKFVWWLPAIPFICPSSSTTRSGAS--TCAATPAAGSNKR 584 G D GL P + W P PSSST+ S +S + ++TP + +R Sbjct: 103 GRDAGLSANPKRSPRWSPQPDPSTPSSSTSSSTSSSPSSSSTPLTSTQRR 152 >AF043702-4|AAK21494.2| 430|Caenorhabditis elegans Hypothetical protein W03D8.8 protein. Length = 430 Score = 27.9 bits (59), Expect = 7.0 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 97 GMIQAAAGFFVYFVIMAENGFLPMKLFGIRKQWDSKAINDLTD 225 G + A+ GF V + + +LP K+ + ++ +KAIN L D Sbjct: 168 GAMLASEGFVVLCLAFFQFKYLPQKMEDVDMEYFAKAINYLID 210 >AC006629-9|ABC48255.1| 319|Caenorhabditis elegans Hypothetical protein F12E12.10 protein. Length = 319 Score = 27.9 bits (59), Expect = 7.0 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -3 Query: 245 VHSCP*ESVKSLMAFESHCFLIPKSFI 165 +HS P + +K ++ +HC +IP SFI Sbjct: 8 IHSLPTKPLKIVLQSFTHCSIIPYSFI 34 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,027,593 Number of Sequences: 27780 Number of extensions: 346725 Number of successful extensions: 1133 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1132 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1529108810 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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