Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060097.seq
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.4  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 367 APGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASKPL 248
           A   +I+ TP  P  ST+  +T      T  S  P +KP+
Sbjct: 151 AASNVISSTPLPPTTSTTTRTTLTTKFTTKPSTKPTNKPV 190


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 471 RVQPASFQRSGKLGPRGEPEPTS 403
           ++Q A+  ++G LGP G P  T+
Sbjct: 137 KLQAAAVTQNGVLGPTGSPPLTT 159


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 471 RVQPASFQRSGKLGPRGEPEPTS 403
           ++Q A+  ++G LGP G P  T+
Sbjct: 139 KLQAAAVTQNGVLGPTGSPPLTT 161


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 229  SATQVTKEVWTQA*S*RWSVVLELVWTTSTST 324
            S+T+     WT   S  WS      W T+T+T
Sbjct: 1026 SSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTT 1057


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 429 PRGEPEPTSTCRSARTRSA 373
           P  EP+PT T  S  T+++
Sbjct: 397 PTPEPQPTQTTESEPTQAS 415


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 438 KLGPRGEPEPTSTCRSARTR 379
           K  P+G P P+ST  S  T+
Sbjct: 68  KKSPQGAPSPSSTPSSLPTQ 87


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 24  TPASSLTTIALPNQDGRGTLSXVLIVDGVGAKCAELLNAL 143
           +PA+ ++ + + +     T   +L+ D V     ELL A+
Sbjct: 228 SPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAV 267


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 24  TPASSLTTIALPNQDGRGTLSXVLIVDGVGAKCAELLNAL 143
           +PA+ ++ + + +     T   +L+ D V     ELL A+
Sbjct: 228 SPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAV 267


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 24  TPASSLTTIALPNQDGRGTLSXVLIVDGVGAKCAELLNAL 143
           +PA+ ++ + + +     T   +L+ D V     ELL A+
Sbjct: 548 SPATIISNVTVISWQAVCTFYNILLCDSVAHTAGELLGAV 587


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
 Frame = +1

Query: 409 WFWLATWS-QLSTALKAGRLDPALYTXQRSSLGKTL 513
           W+W+  WS  LS       LD   +   R +L   L
Sbjct: 629 WYWVMDWSDMLSVGNMTLILDKFFFPRWRQTLAMWL 664


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,561
Number of Sequences: 336
Number of extensions: 2845
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)