Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060097.seq
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.32 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.73 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   0.96 
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   6.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.0  
AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          23   9.0  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.0  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
 Frame = -3

Query: 352 ITPTPFLPAESTS-----MLSTPAPARPTTFSFTPASKPL 248
           ++P P LP  S+      +L +P PA+    S  PASK L
Sbjct: 361 VSPVPSLPVRSSPEPSPVLLRSPTPAKKPLISVAPASKLL 400


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 17/70 (24%), Positives = 25/70 (35%)
 Frame = +3

Query: 138 ALRNRHHHQGQDLQGRTSYGDTQPRRSGCAFSNSSDQRGLDAGVKLKVVGRAGAGVDNID 317
           A+ +RHHH    L                A         ++    +   G AG G D  +
Sbjct: 487 AMASRHHHHRAGLHHHDLASGVVVNAVLAAGGGGGGSGCVNGSRTVGAGGMAGGGSDGPE 546

Query: 318 VDSAGKKGVG 347
            + AG+ GVG
Sbjct: 547 YEGAGRGGVG 556



 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/41 (31%), Positives = 13/41 (31%)
 Frame = -1

Query: 519 DGEGLAQRASLXSVQSRVQPASFQRSGKLGPRGEPEPTSTC 397
           DG G   R S  SV S   P     S           TS C
Sbjct: 771 DGSGSGSRCSKPSVTSTTPPTPASLSSSSSSSSSASSTSLC 811


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -3

Query: 334 LPAESTSMLSTPAPARPTTFSFT 266
           LPA+++S L++P PAR    +FT
Sbjct: 364 LPADNSSALNSPNPARAPPRNFT 386


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 312 CCPHQLQHDRPPS 274
           CCP   Q D PPS
Sbjct: 60  CCPQSQQLDSPPS 72


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -3

Query: 397 QVSSHALSALAPGALIT--PTPFLPAESTSMLSTPAPARPTTFSFTPASKP 251
           Q +S+  S+ A  ++ T  P+P   A +  + S P P  P   S +P   P
Sbjct: 750 QQNSNGSSSTASSSVSTGMPSPSRSAFADGIGSPPPPPPPPPSSLSPGGVP 800


>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 108 VGAKCAELLNALRNRHH 158
           + A C  L N+LRNR H
Sbjct: 65  ISAICLPLSNSLRNRKH 81


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 183 RTSYGDTQPRRSGCAFSNSSDQ 248
           R  Y +T+    GC F  SSD+
Sbjct: 329 RARYNETRDEHMGCNFLISSDE 350


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -3

Query: 370 LAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASKPLWS 242
           LA G    P+P +    + M S  AP   ++   TP   P+ S
Sbjct: 151 LADGLHSIPSPPITVSGSDMSSPGAPTGSSSPQITPRPTPVKS 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,564
Number of Sequences: 2352
Number of extensions: 12257
Number of successful extensions: 52
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)