Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060096.seq
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.91 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.91 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   0.91 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 120 FRLWVTMYKE*QYITQVKNMNTK*TP 43
           F+LW T+Y   Q   +V++ + + TP
Sbjct: 278 FQLWATVYTSSQVTREVQSRSNRMTP 303


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 50  YLVFIFLTCVIYCYSLYIV 106
           Y  FI L CV Y Y  +I+
Sbjct: 104 YYAFIILLCVYYFYYAFII 122



 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 53  LVFIFLTCVIYCYSLYIV 106
           L  +FL C+ Y YS +I+
Sbjct: 204 LHLLFLPCIYYFYSAFII 221



 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 50  YLVFIFLTCVIYCYSLYIV 106
           Y V I L C+ Y Y  +I+
Sbjct: 229 YCVLIILLCIYYFYYAFIL 247


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 120 FRLWVTMYKE*QYITQVKNMNTK*TP 43
           F+LW T+Y   Q   +V++ + + TP
Sbjct: 274 FQLWATVYTSSQVTREVQSRSNRMTP 299


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 62  IFLTCVIYCYSLYIVTHNL 118
           + L CV+Y   L+ +T+NL
Sbjct: 171 LHLFCVLYVVLLHFLTYNL 189


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 62  IFLTCVIYCYSLYIVTHNL 118
           + L CV+Y   L+ +T+NL
Sbjct: 171 LHLFCVLYVVLLHFLTYNL 189


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +2

Query: 38  IRGVYLVFIFLTCVIYCYSLYIV 106
           ++ + + F+ ++  I C+S YI+
Sbjct: 247 VKTIKITFVIVSVFILCWSPYII 269


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 43  WSLFGVHIFNLCYILLF 93
           W++   HIF +C  L++
Sbjct: 157 WNILFGHIFTVCRTLIY 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,450
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)