Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060096.seq
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 47 1e-05
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 44 1e-04
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 41 0.001
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 40 0.002
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 39 0.003
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 36 0.020
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 36 0.027
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 35 0.047
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 35 0.047
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 35 0.047
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 35 0.062
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 35 0.062
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 33 0.14
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 33 0.14
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 33 0.14
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.19
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 31 0.58
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 31 0.58
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.58
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 31 0.58
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.58
SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75) 31 0.77
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 31 0.77
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 30 1.3
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 30 1.3
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 30 1.8
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 2.3
SB_27832| Best HMM Match : DUF1603 (HMM E-Value=5.3) 29 2.3
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 2.3
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_43380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 28 7.1
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 28 7.1
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 28 7.1
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 27 9.4
SB_24703| Best HMM Match : Disintegrin (HMM E-Value=0.8) 27 9.4
SB_16982| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 142 KIFIGNLS-DKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKSA 279
+IFIGNL+ DK DL +F ++G V+ C + N+GFV ++T K A
Sbjct: 47 RIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGA 93
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 348 SRKAPSTPTTKIFVGNL-TDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 500
++ P + +IF+GNL TDK ++ E+F + G V+ C + N+GFV +
Sbjct: 37 NKNDPHSVRCRIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFE 88
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVTWKTNKS 276
KIFIG L+ TTE L+ F ++GT+V+C I+ R +GFVT++++ S
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSDS 101
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 348 SRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 485
S+ + S KIF+G L T +++ F ++GT+V+C I++ G
Sbjct: 41 SKMSESEKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRDG 86
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 121 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKSAAKPFR 294
M GT ++F+G LS +T DL +F YG ++ CD+ YGF+ ++ + A + R
Sbjct: 1 MASRGT-QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMR 57
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +3
Query: 375 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 500
T++FVG L+ +T+ ++ +F +G ++ CD+ YGF+ +
Sbjct: 6 TQLFVGRLSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYE 47
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKSA 279
++++G L TTE D+R F YG + + ++ NYGFV ++ ++ A
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFEDDRDA 49
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 378 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 500
++++G L T +VR F+ +G + + ++ NYGFV +
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNNYGFVEFE 44
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 124 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG 249
PG T +F+GN+ TT DL+ FE+YG V++ DI + G
Sbjct: 245 PGC-TRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG 285
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 372 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 485
T +FVGN+ T +++E F+++G V++ DI + G
Sbjct: 248 TRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG 285
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 7/53 (13%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVTWKTNKSA 279
+IF+ + +TTE++LR FE+YG V E IVR+ Y F+T+++ + A
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVA 61
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 378 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
+IFV +T E+R F+++G V E IVR+
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRD 42
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +1
Query: 133 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVTWKTNKSAAK 285
G +++ NLS T ADL+ F +YG VV IV N +G VT T++ AAK
Sbjct: 347 GGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVTMTTSEEAAK 405
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 130 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGF 252
TG ++F+GNL D E +++ +F+KYG V E I + GF
Sbjct: 50 TGRCRLFVGNLID-CDEEEMKEMFKKYGEVAEVFINKEKGF 89
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 366 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 500
T ++FVGNL D E++E+F+K+G V E I + +GF+ LD
Sbjct: 50 TGRCRLFVGNLIDCDEE-EMKEMFKKYGEVAEVFINKEKGFGFIRLD 95
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 130 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 243
+ + K+F+G + E DLRP+FE YG + E I+++
Sbjct: 167 SNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKD 204
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 243
K+F+G +S E DLR +F +GT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 378 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
K+FVG ++ + ++R +F FGT+ E ++RN
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRN 248
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 35.9 bits (79), Expect = 0.027
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 243
+F+ L+ TT+ DL +F ++GT++ C+++R+
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 369 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
P +FV L T ++ +F +FGT++ C+++R+
Sbjct: 118 PDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 243
+++GNL T +DL +FE+YG VV+ I+R+
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRD 44
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKSAAK 285
I++ N+ +E L+ +F KYG + + +R+YGFV + +SA +
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQ 50
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 381 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVH 494
I+V N+ +++ +F K+G + + +R+YGFV+
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRDYGFVY 41
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVE 225
++FIGNL +AD+ +F KYGT++E
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 348 SRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 461
+R AP + ++F+GNL + +V E+F K+GT++E
Sbjct: 350 ARSAPDSH--QVFIGNLPSGVKDADVNEVFSKYGTILE 385
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 234
K+F+G LS +TT+ L+ F KYG +V DI
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDI 60
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 306 ELVHGQ-AIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 470
E V+G +++ K+R K+FVG L+ +T ++E F K+G +V DI
Sbjct: 5 EAVNGYIGTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDI 60
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 339 AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQK-FGTVVECDIVRNY 482
AA K P KIFVG L +T ++RE F K + V E + + +
Sbjct: 91 AAPIGKPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEH 139
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 34.7 bits (76), Expect = 0.062
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +3
Query: 252 RHMENEQVGREAIQNLN------GELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTR 413
RH N V +A +N N GE + G I+++ A + KA + +F+GNL
Sbjct: 10 RHTLNGYVVYKAAENANQAIASNGEEIDGFHIRVDLASNDKAHDHQRS-VFIGNLPFDIE 68
Query: 414 APEVRELFQKFGTVVECDIVRN 479
+RELF G V ++R+
Sbjct: 69 EEPLRELFTTCGNVESVRLIRD 90
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI---VRNYGFVTW 261
K+F+G L + TTE L F ++G V + I R++GFVT+
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFVTF 242
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 312 VHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI---VRNY 482
+ G+ ++ + ++ + P K+FVG L + T + E F +FG V + I R++
Sbjct: 179 IQGRLCEVRLPRPKEELNVPK-KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHF 237
Query: 483 GFV 491
GFV
Sbjct: 238 GFV 240
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +1
Query: 115 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI--------VRNYGFVTWKTN 270
+K+ G + + L TTE++++ F ++G + C++ R +GFV +K +
Sbjct: 107 TKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKD 166
Query: 271 KSA 279
+ A
Sbjct: 167 EDA 169
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYG----TVVECDIV----RNYGFVTWKTNK 273
K+F+G L+ +TT LR FE YG VV CD R +G+VT+ K
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYK 66
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 160 LSDKTTEADLRPLFEKYGTVVECDIVRNY 246
LS TTE DLRP+FEKYG V IV ++
Sbjct: 188 LSLYTTERDLRPVFEKYGPVEAIQIVYDH 216
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 378 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 473
K+FVGN+ K RA E+++ F FG VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 237
K+F+GN+ K +L+ F +G VV I+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQII 111
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 136 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 240
T +F+GNL + DLR FEK+G V++ DI R
Sbjct: 236 TRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKR 270
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 372 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 476
T +FVGNL ++R F+KFG V++ DI R
Sbjct: 236 TRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKR 270
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 312 VHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECD 467
+ GQ I K S TT+++VG L PE+ F +FG + D
Sbjct: 297 MQGQCIGRNHIKIGYGRSQQTTRLWVGGLGPWISIPELEREFDRFGAIRRID 348
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 136 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN---YGFVTWKTNKSAAKPFRIL 300
T K+++GNL ++L FEK+G + + + RN + FV ++ + A + R L
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVREL 60
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 372 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
TTK++VGNL + E+ F+KFG + + + RN
Sbjct: 3 TTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARN 38
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG 249
++++GNL E DL +F KYG + + D+ G
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRG 297
Score = 31.1 bits (67), Expect = 0.77
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 378 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 485
+++VGNL R ++ ++F K+G + + D+ G
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRG 297
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = +1
Query: 139 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVTWKTNKSAAKPFR 294
F+IF G+L + T+ L F KY + ++ IVR+ YGFV++K K R
Sbjct: 217 FRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMR 276
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVTWK 264
+F+G L+ T E L+ FE++G V I+ RNYGFV +K
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFK 128
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 109 P*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 237
P + G +F+ NLS+ T E D+ F YG V + I+
Sbjct: 309 PNEEKQGVRERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHIL 351
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = +3
Query: 381 IFVGNLTDKTRAPEVRELFQKFGTVVECDIV-------RNYGFV 491
+FVG L T +++ F++FG V I+ RNYGFV
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFV 125
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 243
+++ N+ + EA+ R FE YG +V C ++R+
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRD 167
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTV 219
K+FIG L+ TTE DL+ F YG V
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 124 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKS 276
PG +FI +L + T+ADL F+ +GTV+ + F+ +TN S
Sbjct: 224 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKV-----FIDKQTNMS 269
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 124 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKS 276
PG +FI +L + T+ADL F+ +GTV+ + F+ +TN S
Sbjct: 272 PGPDGSNLFIYHLPQEFTDADLMQTFQPFGTVISAKV-----FIDKQTNMS 317
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 345 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 470
+ +++P+ TK++V +LT V+E+F +G V D+
Sbjct: 1147 RRKRSPTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDL 1188
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Frame = +1
Query: 133 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVTWKTNKSAAK 285
G ++++G+L TEA ++ +FE +GTV ++ + YGFV ++ ++A +
Sbjct: 240 GPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKR 298
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 31.5 bits (68), Expect = 0.58
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%)
Frame = +1
Query: 121 MPGTGTFKI-----FIGNLSDKTTEADLRPLFEKYGTVV--------ECDIVRNYGFVTW 261
+P TG K+ +I L TT+ DL L KYGT++ + ++ + YGFV +
Sbjct: 89 LPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDF 148
Query: 262 KTNKSAAK 285
++ SA K
Sbjct: 149 ESPISAQK 156
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVTWKTNKS 276
K +IGNL K EADL+ F +Y VV+ ++ R + FVT+ + K+
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKN 282
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 509 DVNDAIKELNGMMVDGQPMKVQLSTSRVRXAAG 607
++ DAI EL+G DG+ MKV + SR + G
Sbjct: 282 NMEDAINELDGQEFDGRSMKVNQARSREQRGGG 314
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVTWKTNKSA 279
+I+I ++ E D++ +FE +G VV C + + YGF+ ++ +SA
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSA 253
>SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75)
Length = 886
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 154 GNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKSAAKP 288
G+ + K E L+PL + Y + V C++ + + K NK + KP
Sbjct: 131 GSFTSKPLEGKLKPLMDNYKSPVNCEMFYD-DMINAKKNKESLKP 174
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 31.1 bits (67), Expect = 0.77
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 124 PGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECD 231
P + + + NLS +T+ DL+ F KYG V D
Sbjct: 793 PVRTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYAD 828
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--RNYGFVTWKTNKSAAK 285
+++G L K TE DLR F ++G + +V +N FV + T+++AA+
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVCF-TSRAAAE 353
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 30.7 bits (66), Expect = 1.0
Identities = 9/36 (25%), Positives = 23/36 (63%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGF 252
+++GNL + +L+ +F +YG+++E + + G+
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGY 652
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 345 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
++R P ++VGNL K + +F K VV C ++ +
Sbjct: 359 RARYFPEEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINS 403
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVTWKTNKSA 279
+++GNL K T+ + +F K VV C ++ + Y FV ++T+ A
Sbjct: 371 LYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHADA 421
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVTWKTNKSAAKPFRIL 300
+F+GN+ + +E L+ +F + G V+ +V + YGF +K ++A R L
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +1
Query: 109 P*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG 249
P +P +F+GNLS E L FE+ G C ++ G
Sbjct: 170 PKKTVPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQEG 216
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKSAAK 285
+++ NLS TE L+ + +YG V +++Y FV + A K
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALK 377
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +1
Query: 118 KMPGTGTFKI----FIGNLSDKTTEADLRPLFEKYGTVVE 225
K PGTG+ K+ FIG + E +L P+FE+ G + +
Sbjct: 141 KPPGTGSEKVCSQVFIGKVPRDCFEDELIPVFEECGHIYD 180
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 80 IYCYSLYIVTHNLKCRAPVLSKSSSGTFLIKPQKPILDRYSKNTVRS*NAISSEITVS 253
IYC S + V + APVL K + T +I+P P+ ++ N AI E+ +S
Sbjct: 186 IYCASKFAVEGYAEAMAPVLGKFNIKTTIIEP-GPVATNFASNA----KAIRDEVDIS 238
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVTWKTNKSA--AKPFR 294
+F+GNL + TE L YG + +VR+ YGFV + T ++A AK
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 295 ILTAS 309
+ TAS
Sbjct: 175 LNTAS 179
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 509 DVNDAIKELNGMMVDGQPMKVQLSTSRVRXAAG 607
D A+K LNG V G+ +K+ S SR R G
Sbjct: 111 DAQTAVKSLNGKEVQGRTLKIAPSISRGRDGGG 143
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 366 TPTTKIFVGNLTDKTRAPEVRELFQKFGTV 455
T T KIF+G L+ T ++++ F +FG V
Sbjct: 180 TTTKKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 243
K++IGNL+ + E ++ FE++G V + DI+R+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRD 42
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 378 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
K+++GNL + E+ + F++FG V + DI+R+
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRD 42
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 237
+FI NLS +T+ ++ LF+++G + C +V
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVV 448
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Frame = +1
Query: 115 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVTWKT 267
SK P IF+ NL T+A+ + FE+ G + IV R +G+VT+
Sbjct: 12 SKTPVISKTTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFAL 71
Query: 268 NKSAAK 285
+ A K
Sbjct: 72 EEDALK 77
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 285 AIQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 461
AI+ +N V+G+ I++ A + +F+GNL + + + F FG +++
Sbjct: 70 AIKVMNMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQ 128
>SB_27832| Best HMM Match : DUF1603 (HMM E-Value=5.3)
Length = 215
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 284 FAADLFVFHVTKP*FLTISHSTTVPYFSNSGLRSASVVLSERF 156
FA F F +TK FL ++T + Y + + SAS +LS F
Sbjct: 94 FAGKYFNFTITKEFFLRKKNATLITYIVFAFISSASCILSNVF 136
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV 237
I++G+L+ T+ L+ +FE++GT+ D++
Sbjct: 543 IWVGHLAKIVTQDTLQGIFEEHGTITSIDLI 573
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 381 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
+FV NL + E+ ELF K G V + +V N
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTN 205
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 324 AIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
++ + S P +P KIF+G L + +V+EL FG + ++V++
Sbjct: 657 SVHVPGVVSTVVPDSPH-KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKD 707
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVTWKTNKSA 279
+++ G L E DL YG V E + YGFV + + A
Sbjct: 6 RVYFGRLPRDCRERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDA 51
>SB_43380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 13 VRHVYCVGNSWSLFGVHIFNLCYILLFFVHSNP*SKMPGTG 135
+ H+ W + +H+ N Y+L F S P ++ +G
Sbjct: 202 IHHLGYKATFWGILSLHLINFIYLLFFLPESMPKQRIEQSG 242
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 133 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 243
G + + NL+ +TT DL+ +F+KYG + + I R+
Sbjct: 14 GMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRD 50
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 243
+ I NL E DL+ L + YG V+ C+I R+
Sbjct: 121 LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERD 153
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 234
K+F+G L++ TTE +R F+ + E D+
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADV 39
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 509 DVNDAIKELNGMMVDGQPMKVQLSTSRVRXAAG 607
++ AI E +G DG+PMKV + R AG
Sbjct: 57 EMEKAIDEFDGQDFDGRPMKVNQAQPRGERGAG 89
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 366 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 479
T TK+FVG + ++ +R+ F +FG + E ++++
Sbjct: 7 TKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKD 44
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Frame = +1
Query: 142 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVTWKTNKSAAKPFRI 297
+ +IGNLS E L F VV+ ++ R +GFVT + K+ KP +
Sbjct: 83 RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKKTRIKPLKN 141
Query: 298 LT 303
LT
Sbjct: 142 LT 143
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 145 IFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFVTWKTNKSA 279
IF+ L + T L LF YG + +E + + YGFV + A
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLDKGYGFVNMSNYEEA 320
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +1
Query: 136 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVTWKTNKSAAKPF 291
T I + NLS++T E+DL+ LF G + + ++ + F+ + + AA+
Sbjct: 180 TATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAI 239
Query: 292 RILT 303
+L+
Sbjct: 240 EVLS 243
>SB_24703| Best HMM Match : Disintegrin (HMM E-Value=0.8)
Length = 640
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 327 SPAHELTRR*DSEWLRGRLVRFPCDETVISDDIA 226
SP H R+ SE+ G+L DE VI D A
Sbjct: 272 SPQHVFIRKRQSEYFEGKLDNVGPDEAVIQVDFA 305
>SB_16982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = -2
Query: 308 LAVKILNGFAADLFVFHVTKP*FLTISHSTTVPYFSNSGLRSASVVLSE---RFPMKILK 138
L VK+LN F+ H + L++ +V+ SE RFP K
Sbjct: 415 LTVKLLNFVLQSKFISHHLSSYLNAQCDENEINDNGLEALQNIAVLFSELLSRFPSSYAK 474
Query: 137 VPVPGILDY 111
+P+P + +Y
Sbjct: 475 LPIPALKEY 483
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,585,007
Number of Sequences: 59808
Number of extensions: 358803
Number of successful extensions: 1035
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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