Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060096.seq
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.0  
AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.        23   6.0  
AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.        23   6.0  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 499 TRRGCERRYQRVERYDGRRTA 561
           T+R C R  +RV+R   RR A
Sbjct: 866 TKRECRRLLERVQRVSARRVA 886


>AM182453-1|CAJ65691.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 580 RQLHLHGLSVDHHTVQLFDSVVHIPVASKCT 488
           R LH H L+V +    L D  ++ P   KC+
Sbjct: 81  RSLHAHALNVMNFIGTLIDYGLNDPALLKCS 111


>AM182452-1|CAJ65690.1|  168|Anopheles gambiae globin 1 protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 580 RQLHLHGLSVDHHTVQLFDSVVHIPVASKCT 488
           R LH H L+V +    L D  ++ P   KC+
Sbjct: 81  RSLHAHALNVMNFIGTLIDYGLNDPALLKCS 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,573
Number of Sequences: 2352
Number of extensions: 11923
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)