Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060096.seq
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.3  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   7.4  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   7.4  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   7.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.8  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 524 IKELNGMMVDGQPMKVQLSTSR 589
           ++ LNG+   G+P  +QL + R
Sbjct: 315 LRGLNGLEFAGRPQNLQLQSQR 336


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 95  LYIVTHNLKCRAPVLSKSSSGTFLIK 172
           ++I TH L C+  +  K+ S  +L++
Sbjct: 34  MHIRTHTLPCKCHLCGKAFSRPWLLQ 59


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 53  LVFIFLTCVIYCYSLYIVTHNLKC 124
           +  + L CVIYC  ++  T  + C
Sbjct: 3   ITIVSLLCVIYCALVHADTVAILC 26


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 53  LVFIFLTCVIYCYSLYIVTHNLKC 124
           +  + L CVIYC  ++  T  + C
Sbjct: 3   ITIVSLLCVIYCALVHADTVAILC 26


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = +2

Query: 83  YCYSLYIVTHNLKCRAPVLSKSSSGTFLIKPQKPIL 190
           YCY+L     + +C A  + ++   ++L + +  +L
Sbjct: 220 YCYNLTPNQPSAQCEATTMQENDKMSWLFESEDVLL 255


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,070
Number of Sequences: 438
Number of extensions: 2980
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)