Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060095.seq
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.6  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    24   4.6  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    23   8.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.1  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   8.1  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +2

Query: 209 GYMAHELLSKVRWDPASTSLLHNHSNTCSCGCGLKALHTKGERELVEFLTEEIVAERKA 385
           GY A ++ SK        S  H ++N+C+ G   K +  + +    E      V  R A
Sbjct: 119 GYRAQKIRSKKLSVLMHNSAKHPNTNSCTVGVHFKQIVDREDGSFDEVPNSAFVVARTA 177


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 619 GWCLXGLGQXQTEVWNA 569
           GWC+   G  Q  +W A
Sbjct: 577 GWCIFAFGLLQLPIWAA 593


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +3

Query: 129 LQTCVKTANLSGLVSRTQTAVKRDFTRGIWHMSCSRRLDGTLLPPACYT 275
           LQ C  T     L   +   VKRDF + +  M  +  LD   +   CY+
Sbjct: 41  LQLCQSTV----LHRESYQVVKRDFLQQLLEMKANGALDMRQVAGQCYS 85


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 453  TTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSS 337
            T   P P     ++SAG   T  ++ S  ++S+ +S+SS
Sbjct: 937  TQQQPLPPAPAAASSAGVQPTEHSVNSTNVTSINSSSSS 975


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -2

Query: 453 TTSAPSPFTVKPSTSAGRDLTFCALRSATISSV---RNSTSSLSP 328
           TT AP+  TV P+T+     T   +   T ++V   + +T++++P
Sbjct: 27  TTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAP 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,870
Number of Sequences: 2352
Number of extensions: 11719
Number of successful extensions: 49
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)