Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060090.seq
(683 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 158 1e-37
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 151 2e-35
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 150 4e-35
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 144 2e-33
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 142 5e-33
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 137 2e-31
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 136 6e-31
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 134 3e-30
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 122 6e-27
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 120 3e-26
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 118 2e-25
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 118 2e-25
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 117 2e-25
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 116 4e-25
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 116 5e-25
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 115 1e-24
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 111 2e-23
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 109 6e-23
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 108 1e-22
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 107 2e-22
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 107 2e-22
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 106 6e-22
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 105 8e-22
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 105 1e-21
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 105 1e-21
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 103 5e-21
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 102 7e-21
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 102 7e-21
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 102 9e-21
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 102 9e-21
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 100 3e-20
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 100 4e-20
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 100 4e-20
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 99 5e-20
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 99 5e-20
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 100 7e-20
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 100 7e-20
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 99 9e-20
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 99 1e-19
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 98 2e-19
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 98 2e-19
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 98 2e-19
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 98 2e-19
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 97 3e-19
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 97 3e-19
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 97 4e-19
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 97 4e-19
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 97 5e-19
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 97 5e-19
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 97 5e-19
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 96 6e-19
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 96 6e-19
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 96 8e-19
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 95 1e-18
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 95 2e-18
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 95 2e-18
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 95 2e-18
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 95 2e-18
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 94 2e-18
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 94 3e-18
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 94 3e-18
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 4e-18
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 93 6e-18
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 93 6e-18
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 93 8e-18
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 93 8e-18
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 93 8e-18
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 92 1e-17
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 92 1e-17
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 92 1e-17
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 91 2e-17
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 91 2e-17
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 91 2e-17
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 91 2e-17
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 91 3e-17
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 91 3e-17
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 90 4e-17
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 89 7e-17
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 89 9e-17
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 89 9e-17
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 89 9e-17
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 89 1e-16
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 89 1e-16
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 88 2e-16
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 88 2e-16
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 88 2e-16
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 87 3e-16
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 87 3e-16
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 87 3e-16
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 87 4e-16
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 87 4e-16
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 87 4e-16
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 87 5e-16
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 86 7e-16
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 86 9e-16
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 85 1e-15
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 85 1e-15
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 85 1e-15
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 85 2e-15
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 85 2e-15
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 85 2e-15
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 84 3e-15
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 84 3e-15
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 84 3e-15
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 84 4e-15
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 84 4e-15
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 84 4e-15
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 84 4e-15
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 84 4e-15
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 84 4e-15
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 83 5e-15
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 83 5e-15
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 83 5e-15
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 83 5e-15
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 83 5e-15
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 83 6e-15
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 83 6e-15
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 83 6e-15
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 83 8e-15
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 83 8e-15
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 83 8e-15
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 82 1e-14
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 82 1e-14
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 82 1e-14
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 82 1e-14
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 82 1e-14
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 82 1e-14
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 81 2e-14
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 81 2e-14
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 81 2e-14
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 81 2e-14
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 81 2e-14
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 81 3e-14
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 80 4e-14
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 80 4e-14
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 80 4e-14
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 80 4e-14
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 80 4e-14
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 80 4e-14
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 80 6e-14
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 80 6e-14
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 80 6e-14
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 80 6e-14
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 80 6e-14
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 79 8e-14
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 79 8e-14
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 79 1e-13
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 79 1e-13
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 79 1e-13
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 79 1e-13
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 79 1e-13
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 79 1e-13
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 79 1e-13
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 79 1e-13
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 79 1e-13
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 79 1e-13
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 78 2e-13
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 78 2e-13
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 78 2e-13
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 78 2e-13
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 78 2e-13
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 78 2e-13
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 78 2e-13
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 78 2e-13
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 78 2e-13
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 78 2e-13
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 78 2e-13
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 77 3e-13
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 77 3e-13
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 77 3e-13
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 77 3e-13
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 77 3e-13
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 3e-13
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 77 4e-13
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 77 4e-13
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 77 4e-13
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 77 5e-13
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 77 5e-13
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 77 5e-13
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 77 5e-13
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 77 5e-13
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 77 5e-13
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 76 7e-13
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 76 7e-13
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 76 7e-13
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 76 7e-13
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 76 7e-13
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 76 9e-13
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 76 9e-13
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 76 9e-13
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 76 9e-13
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 76 9e-13
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 75 1e-12
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 75 1e-12
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 75 1e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 75 1e-12
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 75 1e-12
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 75 1e-12
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 75 1e-12
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 75 1e-12
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 75 2e-12
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 75 2e-12
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 75 2e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 75 2e-12
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 75 2e-12
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 75 2e-12
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 75 2e-12
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 75 2e-12
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 74 3e-12
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 74 3e-12
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 74 3e-12
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 3e-12
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 3e-12
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 74 3e-12
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 74 3e-12
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 74 4e-12
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 74 4e-12
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 74 4e-12
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 74 4e-12
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 74 4e-12
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 74 4e-12
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 74 4e-12
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 73 5e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 73 5e-12
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 73 5e-12
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-12
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 73 5e-12
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 73 5e-12
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 73 5e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 73 5e-12
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 73 5e-12
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 73 5e-12
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 73 7e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 73 7e-12
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 73 7e-12
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 73 7e-12
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 73 7e-12
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 73 7e-12
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 73 7e-12
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 73 7e-12
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 73 9e-12
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 73 9e-12
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 9e-12
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 9e-12
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 73 9e-12
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 73 9e-12
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 73 9e-12
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 73 9e-12
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 72 1e-11
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 72 1e-11
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 1e-11
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 72 1e-11
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 72 1e-11
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 72 2e-11
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 72 2e-11
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 72 2e-11
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 72 2e-11
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 72 2e-11
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 72 2e-11
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 71 2e-11
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 71 2e-11
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 71 2e-11
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 2e-11
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 71 2e-11
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 71 2e-11
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 71 3e-11
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 71 3e-11
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 71 3e-11
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 71 3e-11
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 71 3e-11
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 71 3e-11
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 71 3e-11
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 71 3e-11
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 3e-11
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 70 5e-11
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 70 5e-11
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 70 5e-11
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 70 5e-11
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 70 5e-11
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 70 6e-11
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 70 6e-11
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 70 6e-11
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 6e-11
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 70 6e-11
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 70 6e-11
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 70 6e-11
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 70 6e-11
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 70 6e-11
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 70 6e-11
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 69 8e-11
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 69 8e-11
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 69 8e-11
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 69 8e-11
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 69 8e-11
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 69 8e-11
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 69 8e-11
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 8e-11
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 69 8e-11
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 69 8e-11
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 69 8e-11
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 69 1e-10
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 69 1e-10
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 69 1e-10
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 69 1e-10
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 69 1e-10
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 69 1e-10
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 69 1e-10
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 69 1e-10
UniRef50_A7U5W8 Cluster: DEAD-box helicase 5; n=6; Plasmodium|Re... 69 1e-10
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 69 1e-10
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 69 1e-10
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 68 2e-10
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 68 2e-10
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 68 2e-10
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 68 2e-10
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 68 2e-10
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 68 2e-10
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 68 2e-10
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 68 2e-10
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 68 2e-10
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 2e-10
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 68 2e-10
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 68 2e-10
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 68 2e-10
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 68 2e-10
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 67 3e-10
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 67 3e-10
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 67 3e-10
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 67 3e-10
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 67 4e-10
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 67 4e-10
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 4e-10
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 67 4e-10
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 67 4e-10
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 67 4e-10
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 67 4e-10
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 67 4e-10
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 67 4e-10
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 66 6e-10
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 66 6e-10
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 66 6e-10
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 66 6e-10
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 66 6e-10
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 66 6e-10
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 66 6e-10
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 66 6e-10
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 66 6e-10
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 66 6e-10
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 66 8e-10
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 66 8e-10
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 8e-10
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 66 8e-10
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 66 8e-10
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 66 8e-10
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 66 8e-10
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 66 1e-09
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 66 1e-09
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 1e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 66 1e-09
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 66 1e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 1e-09
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 66 1e-09
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 66 1e-09
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 66 1e-09
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 66 1e-09
UniRef50_Q6BKH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 66 1e-09
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 1e-09
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 65 1e-09
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 65 1e-09
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 65 2e-09
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 65 2e-09
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 65 2e-09
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 65 2e-09
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 65 2e-09
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 65 2e-09
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 65 2e-09
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 64 2e-09
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 64 2e-09
UniRef50_Q2J919 Cluster: Helicase-like; n=3; Frankia|Rep: Helica... 64 2e-09
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 2e-09
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 64 2e-09
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 64 2e-09
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 64 2e-09
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 64 3e-09
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 64 3e-09
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 64 4e-09
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 64 4e-09
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 64 4e-09
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 63 5e-09
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 63 5e-09
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 63 5e-09
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 63 5e-09
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 63 5e-09
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 63 5e-09
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 63 5e-09
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 63 5e-09
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 63 7e-09
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 63 7e-09
UniRef50_Q0CF43 Cluster: ATP-dependent RNA helicase dbp7; n=10; ... 63 7e-09
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 62 9e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 62 9e-09
UniRef50_A5AUZ1 Cluster: Putative uncharacterized protein; n=1; ... 62 9e-09
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 62 9e-09
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 62 9e-09
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 62 9e-09
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 62 9e-09
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 62 9e-09
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 62 9e-09
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 62 9e-09
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 62 1e-08
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 62 1e-08
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 1e-08
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 62 1e-08
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 62 1e-08
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 62 1e-08
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 62 1e-08
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 2e-08
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 62 2e-08
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 62 2e-08
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 2e-08
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 62 2e-08
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 62 2e-08
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 62 2e-08
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 61 2e-08
UniRef50_UPI0000DB72AE Cluster: PREDICTED: similar to CG9143-PA;... 61 2e-08
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 61 2e-08
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 61 2e-08
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 61 2e-08
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_A2ZD51 Cluster: Putative uncharacterized protein; n=7; ... 61 2e-08
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 61 2e-08
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 61 2e-08
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 61 2e-08
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 61 2e-08
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 61 3e-08
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 61 3e-08
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 61 3e-08
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 3e-08
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 61 3e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 61 3e-08
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 61 3e-08
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 61 3e-08
UniRef50_A0CA40 Cluster: Chromosome undetermined scaffold_160, w... 61 3e-08
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 61 3e-08
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 61 3e-08
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 61 3e-08
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 60 4e-08
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 60 4e-08
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 60 4e-08
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 60 4e-08
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 60 4e-08
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 60 5e-08
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 60 5e-08
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 60 5e-08
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 60 5e-08
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 60 5e-08
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 158 bits (384), Expect = 1e-37
Identities = 74/101 (73%), Positives = 87/101 (86%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
+FG ++VRNTC+FGGAPK +QARDLERGVEIVIATPGRLIDFLE+GTT+L+RCTYLVLD
Sbjct: 252 EFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLD 311
Query: 440 EADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
EADRMLDMGFEPQIRKI++QIRP ++ PK+ R L
Sbjct: 312 EADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQL 352
Score = 84.2 bits (199), Expect = 3e-15
Identities = 35/46 (76%), Positives = 43/46 (93%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQ LMWSATWPKEV++LAE++L +YIQ+NIGSL LSANHNILQ+
Sbjct: 334 PDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQI 379
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELA
Sbjct: 202 QTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELA 243
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
V ++ G+ +PT IQAQGWPIAMSG++LVGV
Sbjct: 168 VMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGV 200
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 151 bits (366), Expect = 2e-35
Identities = 72/103 (69%), Positives = 82/103 (79%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
+ +FG +SYVRNTCVFGGAPK Q RDL+RG EIVIATPGRLIDFL G+TNL+RCTYLV
Sbjct: 374 ATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLV 433
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
LDEADRMLDMGFEPQIRKI+ QIRP + PK+ + L
Sbjct: 434 LDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQL 476
Score = 89.8 bits (213), Expect = 5e-17
Identities = 39/46 (84%), Positives = 45/46 (97%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQTLMWSATWPKEVK+LAED+LG+YIQINIGSL+LSANHNI Q+
Sbjct: 458 PDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQV 503
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELA
Sbjct: 326 KTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELA 367
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
V + ++ GYK PT IQAQGWPIAMSG N VG+ K
Sbjct: 292 VMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAK 326
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 150 bits (363), Expect = 4e-35
Identities = 73/103 (70%), Positives = 80/103 (77%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
+ DFG NTCVFGGAPK Q RDLERG EIVIATPGRLIDFLE+G TNL+RCTYLV
Sbjct: 215 ATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLV 274
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
LDEADRMLDMGFEPQIRKI+ QIRP ++ PK+ RNL
Sbjct: 275 LDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNL 317
Score = 86.2 bits (204), Expect = 7e-16
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQ LMWSATWPKEV+ LAE++L DYIQINIGSL LSANHNILQ+
Sbjct: 299 PDRQVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSANHNILQI 344
Score = 75.8 bits (178), Expect = 9e-13
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKTLAYI PA+VHI +Q +RRGDGPIALVLAPTRELA
Sbjct: 167 QTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELA 208
Score = 39.9 bits (89), Expect = 0.056
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNLVGV 108
G+ +PT IQAQG PIA+SG+++VG+
Sbjct: 141 GFSKPTAIQAQGMPIALSGRDMVGI 165
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 144 bits (348), Expect = 2e-33
Identities = 71/101 (70%), Positives = 77/101 (76%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
DFG + NTC+FGGA K QA DL RGVEIVIATPGRLIDFLE GTTNL+R TYLVLD
Sbjct: 196 DFGRRMSIMNTCIFGGASKHPQADDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLD 255
Query: 440 EADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
EADRMLDMGFEPQIRKII QIRP ++ PK+ R L
Sbjct: 256 EADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWPKEIRKL 296
Score = 80.2 bits (189), Expect = 4e-14
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQ LMWSATWPKE++KLAE++L +YIQINIGSL L+AN NI+Q+
Sbjct: 278 PDRQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLAANENIMQI 323
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELA
Sbjct: 146 KTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELA 187
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNLVGVLK 114
G++EPT IQA GW IAMSG+++VG+ K
Sbjct: 120 GFQEPTSIQAVGWSIAMSGRDMVGIAK 146
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 142 bits (345), Expect = 5e-33
Identities = 71/99 (71%), Positives = 79/99 (79%), Gaps = 2/99 (2%)
Frame = +2
Query: 260 DFGHTS--YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
DFG S +R TC+FGGA K Q RDLERGVE+VIATPGRLIDFLE+G TNL+RCTYLV
Sbjct: 324 DFGTHSKPLIRYTCIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLV 383
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK 550
LDEADRMLDMGFEPQIRKIIEQIRP ++ PK+
Sbjct: 384 LDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE 422
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQ LMWSATWPKEV+ LAED+L DYIQINIGSL LSANHNI Q+
Sbjct: 408 PDRQVLMWSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQI 453
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAXXXXXXXXXXDTH 275
QTGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELA TH
Sbjct: 274 QTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFGTH 328
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
V + MG+ PT IQAQGWPIA+SG++LVG+
Sbjct: 240 VMNEINKMGFPNPTAIQAQGWPIALSGRDLVGI 272
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 137 bits (332), Expect = 2e-31
Identities = 68/100 (68%), Positives = 75/100 (75%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG +S +RNTCV+GG PK Q RDL RGVE+ IATPGRLID LE G TNL+R TYLVLDE
Sbjct: 230 FGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDE 289
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
ADRMLDMGFEPQIRKII QIRP + PK+ R L
Sbjct: 290 ADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRAL 329
Score = 82.2 bits (194), Expect = 1e-14
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
P+RQTLMWSATWPKEV+ LA D+L D+IQ+NIGS++L+ANH I Q+ V M+K+
Sbjct: 311 PDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKR 366
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA
Sbjct: 179 ETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELA 220
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLKRVPAKRWPTSCQP 153
V VK G+ PT IQ+QGWP+A+SG+++VG+ + K T C P
Sbjct: 145 VMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTL-TYCLP 191
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 136 bits (328), Expect = 6e-31
Identities = 65/85 (76%), Positives = 70/85 (82%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
S FG S R+TC++GGAPK Q RDL RGVEIVIATPGRLID LE G TNL+R TYLV
Sbjct: 344 SGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLV 403
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRP 508
LDEADRMLDMGFEPQIRKI+ QIRP
Sbjct: 404 LDEADRMLDMGFEPQIRKIVAQIRP 428
Score = 69.7 bits (163), Expect = 6e-11
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA
Sbjct: 296 QTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELA 337
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQTL WSATWP+EV+ LA +L + ++ IGS L ANH+I Q+
Sbjct: 428 PDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQI 473
Score = 46.4 bits (105), Expect = 7e-04
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +1
Query: 16 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
Q + G+ EPTPIQ+QGWP+A+ G++++G+
Sbjct: 264 QAIAKSGFVEPTPIQSQGWPMALKGRDMIGI 294
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 134 bits (323), Expect = 3e-30
Identities = 62/83 (74%), Positives = 69/83 (83%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
DFG ++NTC+FGG KR+Q DL+ GVEIVIATPGRLIDFL TNL+RC+YLVLD
Sbjct: 182 DFGRAMKIKNTCLFGGGAKRQQGDDLKYGVEIVIATPGRLIDFLSSEHTNLRRCSYLVLD 241
Query: 440 EADRMLDMGFEPQIRKIIEQIRP 508
EADRMLDMGFEPQIR IIEQIRP
Sbjct: 242 EADRMLDMGFEPQIRAIIEQIRP 264
Score = 79.4 bits (187), Expect = 8e-14
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+ QTLMWSATWP V +L +DYL DYIQIN+GSL+L+ANHNILQ+
Sbjct: 264 PDHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAANHNILQI 309
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELA
Sbjct: 132 KTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELA 173
Score = 46.0 bits (104), Expect = 9e-04
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ PTPIQ+QGWPIAMSG+++VG+ K
Sbjct: 107 FTTPTPIQSQGWPIAMSGRDMVGIAK 132
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 122 bits (295), Expect = 6e-27
Identities = 60/102 (58%), Positives = 70/102 (68%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG +RNT ++GG PKR Q + GVEI IA PGRLID LE+G TNL R TYLVLDE
Sbjct: 84 FGSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDE 143
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
ADRMLDMGFEPQIRK++ QIRP + PK+ + L R
Sbjct: 144 ADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQKLAR 185
Score = 66.9 bits (156), Expect = 4e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL
Sbjct: 33 ETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTREL 73
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQ-LSANHNILQL*IFVKNMKKK 672
P+RQTL+WSATWPKEV+KLA D + I IN+GS+ L A+HNI Q V+ +KK
Sbjct: 165 PDRQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKK 222
Score = 39.1 bits (87), Expect = 0.099
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 43 EPTPIQAQGWPIAMSGKNLVGV 108
EPT IQ QGWP+A+SG +++G+
Sbjct: 10 EPTAIQVQGWPVALSGHDMIGI 31
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 120 bits (289), Expect = 3e-26
Identities = 57/82 (69%), Positives = 65/82 (79%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG +S ++ + +GG PKR Q L RGVEI+IA PGRLIDFLE TNL+R TYLVLDE
Sbjct: 306 FGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDE 365
Query: 443 ADRMLDMGFEPQIRKIIEQIRP 508
ADRMLDMGFEPQIRKI+ QIRP
Sbjct: 366 ADRMLDMGFEPQIRKIVGQIRP 387
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA
Sbjct: 255 ETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELA 296
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
P+RQTLM+SATWPKEV L+ L + + +NIGSL L+ HNI Q ++ +K++
Sbjct: 387 PDRQTLMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTTCHNIEQNVFILEEREKRV 444
Score = 48.8 bits (111), Expect = 1e-04
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+ ++ G+KEPTPIQ Q WPIA+SG++++G+
Sbjct: 221 ILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGI 253
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 118 bits (283), Expect = 2e-25
Identities = 54/99 (54%), Positives = 72/99 (72%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
L + ++T + FG +S + + C++GGAPK Q RDLERG +IV+ATPGRL D L
Sbjct: 309 LSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDIL 368
Query: 392 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 508
E +L + +YLVLDEADRMLDMGFEPQIRKI++Q++P
Sbjct: 369 EMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQP 407
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQ 639
P RQTLM++ATWPKEV+K+A D L + +Q+NIG+ QL AN +I Q
Sbjct: 407 PKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQ 452
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL Y++P + + R DGP LVL+PTRELA
Sbjct: 276 KTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELA 316
Score = 41.1 bits (92), Expect = 0.024
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
V+ G+ PTPIQAQ WPIA+ +++V V K
Sbjct: 246 VQQAGFSAPTPIQAQSWPIALRNRDIVAVAK 276
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 118 bits (283), Expect = 2e-25
Identities = 54/99 (54%), Positives = 74/99 (74%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
L + ++T + FG +S + +TC++GGAPK Q RDL+RGV++V+ATPGRL D L
Sbjct: 228 LAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDIL 287
Query: 392 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 508
E +L++ +YLVLDEADRMLDMGFEPQIRKI+++I P
Sbjct: 288 EMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPP 326
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQ 639
P RQTLM++ATWPKEV+++AED L +Q+ IGS+ +L AN I Q
Sbjct: 326 PRRQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQ 371
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL Y+LP +HI R GP LVLAPTRELA
Sbjct: 195 KTGSGKTLGYLLPGFMHIKRLQNNPR-SGPTVLVLAPTRELA 235
Score = 41.1 bits (92), Expect = 0.024
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
E+ + ++ G+ PTPIQAQ WPIA+ +++V + K
Sbjct: 160 EILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAK 195
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 117 bits (282), Expect = 2e-25
Identities = 60/103 (58%), Positives = 73/103 (70%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
S FG +S ++ C++GGA K Q L++GV++VIATPGRLIDFLE TT L+R TYLV
Sbjct: 194 SERFGKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLV 253
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
LDEADRMLDMGFE QIRKI+ QIRP + PK +NL
Sbjct: 254 LDEADRMLDMGFEIQIRKILGQIRPDRQTLMFSATWPKNVQNL 296
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/42 (73%), Positives = 39/42 (92%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA
Sbjct: 146 ETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELA 187
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
P+RQTLM+SATWPK V+ LA+DY + + + IG +L+ N I Q+ ++V + KKIN
Sbjct: 278 PDRQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQI-VYVTDQSKKIN 335
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 116 bits (280), Expect = 4e-25
Identities = 55/77 (71%), Positives = 64/77 (83%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG +S ++NTC++GG PK Q RDL++GVEIVIATPGRLID LE TNL+R T +VLDE
Sbjct: 192 FGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVT-IVLDE 250
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGFEPQIRK I
Sbjct: 251 ADRMLDMGFEPQIRKCI 267
Score = 72.5 bits (170), Expect = 9e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA
Sbjct: 141 ETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELA 182
Score = 49.6 bits (113), Expect = 7e-05
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
V Q ++ G+ EPTPIQAQGWP+A+ G++L+G+
Sbjct: 107 VLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGI 139
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 496 ANTPNRQTLMWSATWPKEVKKLA 564
++TP+RQTL WSATWPK V ++
Sbjct: 268 SDTPDRQTLYWSATWPKNVNHVS 290
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 116 bits (279), Expect = 5e-25
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG + + CV+GGAPK Q ++L G +IVIATPGRLIDFLE +L+R TYLVLDE
Sbjct: 309 FGSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDE 368
Query: 443 ADRMLDMGFEPQIRKIIEQIRP 508
ADRMLDMGFEP IRKI+ QIRP
Sbjct: 369 ADRMLDMGFEPSIRKIVGQIRP 390
Score = 72.9 bits (171), Expect = 7e-12
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA
Sbjct: 258 QTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELA 299
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/46 (52%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQ 639
P+RQTLM+SATWP+ V++LA D+ GD I I IG ++ + N++I Q
Sbjct: 390 PDRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNNDIDQ 435
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 115 bits (276), Expect = 1e-24
Identities = 54/82 (65%), Positives = 63/82 (76%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F S +RNTC +GG PK Q L++GV I+IA PGRLID LE+ TNL R TYLVLDE
Sbjct: 209 FSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDE 268
Query: 443 ADRMLDMGFEPQIRKIIEQIRP 508
AD+MLDMGFE QIRKI++QIRP
Sbjct: 269 ADKMLDMGFELQIRKIVDQIRP 290
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ + +TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELA 199
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSANHNILQ 639
P+RQTLMWSATWPKEV+ LA+D + IQ+N+GSL L+A +I Q
Sbjct: 290 PDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQ 335
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
V + +K PTPIQ QGWPIA+SGK+++G
Sbjct: 124 VIKSLKNNNIVAPTPIQIQGWPIALSGKDMIG 155
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 111 bits (267), Expect = 2e-23
Identities = 53/102 (51%), Positives = 72/102 (70%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
L + ++T + FG +S + C++GGAPK Q +++ERGV+IV+ATPGRL D L
Sbjct: 239 LSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDIL 298
Query: 392 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPTDR 517
E +L + +YLVLDEADRMLDMGFEPQIRKI+ ++ PT R
Sbjct: 299 EMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV-PTKR 339
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/44 (56%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQ 639
RQTLM++ATWPKEV+K+A D L + Q+NIG++ +L AN +I Q
Sbjct: 339 RQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQ 382
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL Y++P +H+ R GP LVL+PTRELA
Sbjct: 206 KTGSGKTLGYLIPGFMHLQRIHNDSR-MGPTILVLSPTRELA 246
Score = 41.9 bits (94), Expect = 0.014
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+E+ + V + G+ P+PIQAQ WPIAM +++V + K
Sbjct: 170 NELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAK 206
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 109 bits (262), Expect = 6e-23
Identities = 52/99 (52%), Positives = 69/99 (69%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
L + ++T + FG +S + TC++GGAPK Q ++LERG +IV+ATPGRL D L
Sbjct: 513 LAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDIL 572
Query: 392 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 508
E + Q+ + LVLDEADRMLDMGFEPQIRKI+ +I P
Sbjct: 573 EMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPP 611
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQL*IFVKNMKKK 672
P RQTLM++ATWPKEV+K+A D L + +Q+NIG + +L+AN I Q V M+K+
Sbjct: 611 PRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKE 667
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL Y++PA + + + R +GP L+LAPTRELA
Sbjct: 480 KTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELA 520
Score = 40.7 bits (91), Expect = 0.032
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
E+ + + + G+ PTPIQAQ WPIA+ +++V + K
Sbjct: 445 EILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAK 480
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 108 bits (260), Expect = 1e-22
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 472
CV+GGAPK Q L RGV I++ATPGRLIDFL+ NL R TYLVLDEADRMLDMGFE
Sbjct: 207 CVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFE 266
Query: 473 PQIRKIIEQIRP 508
PQ+RKI QIRP
Sbjct: 267 PQVRKICGQIRP 278
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/42 (64%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELA
Sbjct: 147 KTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELA 188
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/56 (41%), Positives = 41/56 (73%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
P+RQT+M+SATWP+E+++LA ++ +I+I++GS +L AN ++ Q I + K+
Sbjct: 278 PDRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTELQANKDVTQRFILTQEFAKQ 333
Score = 41.9 bits (94), Expect = 0.014
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ PTP+QAQ WP+ +SG++LVGV K
Sbjct: 122 FTAPTPVQAQSWPVLLSGRDLVGVAK 147
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 107 bits (258), Expect = 2e-22
Identities = 54/79 (68%), Positives = 57/79 (72%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+ TCV+GG PK Q R L GV + IATPGRLID LE TNL R TYL LDEADRMLD
Sbjct: 248 IMTTCVYGGTPKGPQQRALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLD 307
Query: 461 MGFEPQIRKIIEQIRPTDR 517
MGFE QIRKI QIR TDR
Sbjct: 308 MGFEDQIRKICSQIR-TDR 325
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/42 (71%), Positives = 38/42 (90%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA
Sbjct: 190 KTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELA 231
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
+RQTLM+SATWP+E++ LA + D+++++IGS +L AN ++ Q V+ K+
Sbjct: 324 DRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEELVANADVHQHVFVVEGYHKE 378
Score = 39.5 bits (88), Expect = 0.075
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ Q G+++PTPIQ+ WP+ ++ +++VGV K
Sbjct: 156 IHQAFMDAGFQKPTPIQSVSWPVLLNSRDIVGVAK 190
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 107 bits (257), Expect = 2e-22
Identities = 49/79 (62%), Positives = 60/79 (75%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + S VR V+GGA +Q RDLERG +++ATPGRL+D +E+G L C YLVLDE
Sbjct: 289 FSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDE 348
Query: 443 ADRMLDMGFEPQIRKIIEQ 499
ADRMLDMGFEPQIR+I+EQ
Sbjct: 349 ADRMLDMGFEPQIRRIVEQ 367
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
R T+M+SAT+PKE++ LA D+L +YI + +G + S + NI Q ++V+ K+
Sbjct: 376 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKR 428
Score = 38.7 bits (86), Expect = 0.13
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 13/55 (23%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRELA 236
QTGSGKT A++LP + I + P RR PI+LVLAPTRELA
Sbjct: 225 QTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELA 279
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 106 bits (254), Expect = 6e-22
Identities = 50/115 (43%), Positives = 72/115 (62%)
Frame = +2
Query: 155 CAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARD 334
C YS+ + C L + ++ + S F + +R+ V+GGA Q R+
Sbjct: 248 CQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIRE 307
Query: 335 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 499
++ G +++ATPGRL+DF+EK +L+ C Y+VLDEADRMLDMGFEPQIRKIIE+
Sbjct: 308 VQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQIRKIIEE 362
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/54 (46%), Positives = 41/54 (75%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
NRQTLM+SAT+PKE++KLA D+L +YI + +G + S + +I Q I++ +++K
Sbjct: 370 NRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVG-STSDSIKQEIIYMTDVEK 422
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKT A+++P I H+ NQ + P L+LAPTRELA
Sbjct: 229 QTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELA 274
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 105 bits (253), Expect = 8e-22
Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 451
+R C +GGAP ++Q DL+RG EIV+ TPGR+ID L TNL RCTYLVLDEADR
Sbjct: 520 IRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADR 579
Query: 452 MLDMGFEPQIRKIIEQIRP 508
M D+GFEPQ+ +II IRP
Sbjct: 580 MFDLGFEPQVMRIINNIRP 598
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA
Sbjct: 463 KTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELA 504
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ ++GY++PT IQAQ P SG++++GV K
Sbjct: 433 INSLGYEKPTSIQAQAIPAITSGRDVIGVAK 463
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 624
P+RQT+++SAT+P+ ++ LA L ++I +G + A+
Sbjct: 598 PDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVAS 637
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 105 bits (251), Expect = 1e-21
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
++GGA K Q R+L+ G EI++ATPGRL++FL GT L R +Y V+DEADRMLDMGFEP
Sbjct: 425 IYGGASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFVMDEADRMLDMGFEP 484
Query: 476 QIRKIIEQIRP 508
QIRKI+ QIRP
Sbjct: 485 QIRKIVGQIRP 495
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+QTGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL
Sbjct: 363 SQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTREL 403
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQ 639
P+RQTLM+SATWP E+K+LA ++ + I I +G L+L+AN NI Q
Sbjct: 495 PDRQTLMFSATWPSEIKRLASEFCKANSIYIQVGDLELTANPNIRQ 540
Score = 38.3 bits (85), Expect = 0.17
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++Q +K + EPTPIQ GW ++G++++GV
Sbjct: 329 QIQNIIKESNFTEPTPIQKVGWTSCLTGRDIIGV 362
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 105 bits (251), Expect = 1e-21
Identities = 51/112 (45%), Positives = 72/112 (64%)
Frame = +2
Query: 164 KQPTAYSER*WSDCFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLER 343
K + YS + + L + ++T + F + S+VR V+GGAP Q R+++R
Sbjct: 227 KAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDR 286
Query: 344 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 499
G ++++ATPGRL D LE+G +L YLVLDEADRMLDMGFEPQIR I+E+
Sbjct: 287 GCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEE 338
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
NRQTLM+SAT+P +++ LA D+L +YI +++G + S + NI Q ++V +M KK
Sbjct: 346 NRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVG-STSENITQRILYVDDMDKK 399
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 103 bits (246), Expect = 5e-21
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + V+ +GG P +Q R+LERGV+I++ATPGRL D LE+G +LQ +L LDE
Sbjct: 247 FSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDE 306
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
ADRMLDMGFEPQIRKI++Q+
Sbjct: 307 ADRMLDMGFEPQIRKIVQQM 326
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/54 (38%), Positives = 38/54 (70%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
RQT+++SAT+P+E+++LA D+L +YI + +G + S+ I+Q FV + K+
Sbjct: 334 RQTMLFSATFPREIQRLASDFLSNYIFLAVGRVG-SSTDLIVQRVEFVHDSDKR 386
Score = 40.3 bits (90), Expect = 0.043
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELA 236
QTGSGKT A+ P I I I R G P+A++L+PTRELA
Sbjct: 191 QTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELA 237
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 102 bits (245), Expect = 7e-21
Identities = 43/76 (56%), Positives = 59/76 (77%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
++ FGG P+ Q +D + G +I +ATPGRLIDF+++G T+L RCT+L+LDEADRML+
Sbjct: 255 IKTVRCFGGVPQSSQMKDFQSGCDICVATPGRLIDFIKRGVTSLSRCTFLILDEADRMLE 314
Query: 461 MGFEPQIRKIIEQIRP 508
MGFE Q++ II QIRP
Sbjct: 315 MGFEVQVQDIIGQIRP 330
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKT+++++PAI+HI + P + +GP L+LAPTREL
Sbjct: 198 ETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTREL 238
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/46 (43%), Positives = 34/46 (73%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQT+MW+ATWP+ +++ A ++ +QINIG+ L AN ++ Q+
Sbjct: 330 PDRQTVMWTATWPQAIQQFALGFMFHPLQINIGNPDLHANESVKQI 375
Score = 43.2 bits (97), Expect = 0.006
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+K Y +PTPIQA GWPI + GK++VG+
Sbjct: 168 IKEQNYIKPTPIQAIGWPIVLQGKDVVGI 196
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 102 bits (245), Expect = 7e-21
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+++ V+GG PK Q +L++G +I++ATPGRL+DFLE G NL +C Y+V+DEADR+LD
Sbjct: 230 IKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLDFLENGNINLLKCIYVVIDEADRLLD 289
Query: 461 MGFEPQIRKIIEQIRPTDRL 520
MGFE Q+RKI+ Q+ +L
Sbjct: 290 MGFEKQLRKIMTQVNKNKQL 309
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQL*IFVK--NMKKKI 675
N+Q L +ATWP++V+KLA D+ D ++I IG +L+AN NI Q I +MKKK+
Sbjct: 306 NKQLLFLTATWPEQVRKLAYDFCAYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKL 364
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGV 108
+ EPT IQ WPIA+SGK+L+GV
Sbjct: 81 FSEPTAIQKITWPIALSGKDLIGV 104
Score = 32.7 bits (71), Expect = 8.6
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI 164
+TGSGKTLA++LP +HI
Sbjct: 106 ETGSGKTLAFVLPCFMHI 123
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 102 bits (244), Expect = 9e-21
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + ++ +GGAP +Q R+LERGV+I++ATPGRL+D +E+ +L+ YL LDE
Sbjct: 219 FSYKTGLKVVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDE 278
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
ADRMLDMGFEPQIRKI+EQ+
Sbjct: 279 ADRMLDMGFEPQIRKIVEQM 298
Score = 37.1 bits (82), Expect = 0.40
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI-NNQPPIRRGDG----PIALVLAPTRELA 236
QTGSGKT A+ P I I NQ + RG P AL+L+PTREL+
Sbjct: 165 QTGSGKTAAFCFPIICGILRNQ--LSRGGARLACPTALILSPTRELS 209
Score = 33.1 bits (72), Expect = 6.5
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
+ Q ++ Y +PTPIQ PIAM+G++L+
Sbjct: 131 LNQNIRRCKYVKPTPIQRHAIPIAMAGRDLM 161
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 102 bits (244), Expect = 9e-21
Identities = 47/82 (57%), Positives = 56/82 (68%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG + VFGG K EQ++ L+ G EIV+ATPGRLID ++ TNL R TYLV DE
Sbjct: 202 FGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDE 261
Query: 443 ADRMLDMGFEPQIRKIIEQIRP 508
ADRM DMGFEPQ+R I +RP
Sbjct: 262 ADRMFDMGFEPQVRSIANNVRP 283
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL
Sbjct: 151 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTREL 191
Score = 41.5 bits (93), Expect = 0.019
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
P+RQTL++SAT+ K+V+ L D L D +++ IG L AN ++ Q+ +M K
Sbjct: 283 PDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGELG-EANEDVTQIVHIFNSMPSK 337
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK----RVPAKRWP 138
++ ++ + Y +PT IQ Q PIA+SG++++G+ K + A WP
Sbjct: 116 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 163
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 100 bits (240), Expect = 3e-20
Identities = 52/100 (52%), Positives = 62/100 (62%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + C++GGA KR Q L R +IV+ATPGRLIDFL+ TNL TYLVLDE
Sbjct: 164 FSEAYNMNSACIYGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVLDE 223
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
ADRMLDMGFE Q+RKI IR + PK +NL
Sbjct: 224 ADRMLDMGFEQQVRKIDSYIREDRQTVFFSATWPKTVQNL 263
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA
Sbjct: 116 QTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELA 154
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQ 639
+RQT+ +SATWPK V+ LA D + I + IGS +++ N NI Q
Sbjct: 246 DRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQEVTINKNITQ 290
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+++ + + Y PTPIQA +PI MSG +L+G+
Sbjct: 80 NQLNKRISLKAYNRPTPIQASVFPIIMSGHDLIGI 114
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 100 bits (239), Expect = 4e-20
Identities = 42/81 (51%), Positives = 61/81 (75%)
Frame = +2
Query: 278 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
++R+ V+GG PK Q +L++G +IV+ATPGRL+D LE G +L RC Y+V+DEADR+L
Sbjct: 429 HIRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLDLLESGVIHLLRCIYVVIDEADRLL 488
Query: 458 DMGFEPQIRKIIEQIRPTDRL 520
DMGFE Q++KI+ Q+ +L
Sbjct: 489 DMGFEKQLKKIMTQVNRNKQL 509
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQL*IFVK--NMKKKI 675
N+Q L ++ATWP++V+KLA + D ++I IG +L+AN NI Q + ++KKK+
Sbjct: 506 NKQLLFFTATWPEQVRKLAYQFSSFDPVKIQIGKSELTANKNIQQSVVISSSIDLKKKL 564
Score = 40.3 bits (90), Expect = 0.043
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
HE +KEPT IQ WPIA+SGK+L+GV
Sbjct: 286 HEAVVNHLNAKFKEPTAIQKVTWPIALSGKDLIGV 320
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDG 197
+TGSGKTLA+ LPA++HI Q R G
Sbjct: 322 ETGSGKTLAFALPALMHILKQREGERKSG 350
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 100 bits (239), Expect = 4e-20
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADR 451
+R C +GGAP REQ +L+RG EI++ TPGR+ID L TNL+R TY+VLDEADR
Sbjct: 699 LRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADR 758
Query: 452 MLDMGFEPQIRKIIEQIRP 508
M DMGFEPQ+ KI +RP
Sbjct: 759 MFDMGFEPQVMKIFANMRP 777
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA
Sbjct: 642 KTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELA 683
Score = 40.7 bits (91), Expect = 0.032
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
V +GY++PTPIQ Q P MSG++++GV K
Sbjct: 612 VDNLGYEKPTPIQMQALPALMSGRDVIGVAK 642
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 99 bits (238), Expect = 5e-20
Identities = 51/99 (51%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 451
+R CV+GGAP EQ ++++ +IV+ATPGRLID L + TNL R TYLVLDEADR
Sbjct: 578 LRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADR 637
Query: 452 MLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
M DMGFEPQ+ KI+ IRP + PK+ +L R
Sbjct: 638 MFDMGFEPQVMKILNNIRPDRQTVLFSATFPKQMESLAR 676
Score = 56.0 bits (129), Expect = 8e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA
Sbjct: 521 KTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELA 562
Score = 42.7 bits (96), Expect = 0.008
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+K +GY PTPIQ+Q P MSG++++GV K
Sbjct: 491 IKRLGYSAPTPIQSQAMPAIMSGRDIIGVAK 521
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDY-IQINIGSLQLSA 621
P+RQT+++SAT+PK+++ LA L + ++I +G + A
Sbjct: 656 PDRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVA 695
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 99 bits (238), Expect = 5e-20
Identities = 46/82 (56%), Positives = 57/82 (69%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG +R+ V+GG EQA+ L+ G EIV+ TPGRLID ++K TNLQR +YLV DE
Sbjct: 349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408
Query: 443 ADRMLDMGFEPQIRKIIEQIRP 508
ADRM DMGFE Q+R I +RP
Sbjct: 409 ADRMFDMGFEYQVRSIASHVRP 430
Score = 56.0 bits (129), Expect = 8e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL
Sbjct: 298 KTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTREL 338
Score = 41.5 bits (93), Expect = 0.019
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
++ ++ Y +PTPIQ QG P+A+SG++++G+ K
Sbjct: 263 QLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAK 298
Score = 40.3 bits (90), Expect = 0.043
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQTL++SAT+ K+++KLA D L D I++ G + AN ++ Q+
Sbjct: 430 PDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQI 474
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 99.5 bits (237), Expect = 7e-20
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
++ TCVFGGAP EQ R+L RG++IVIATPGRLID L++ L +L+LDEADRMLD
Sbjct: 220 LKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADRMLD 279
Query: 461 MGFEPQIRKII 493
MGFEPQ++++I
Sbjct: 280 MGFEPQMQEVI 290
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+QTGSGKT A++LP I + P + L PTRELA
Sbjct: 165 SQTGSGKTAAFMLPVITQLIG---TCHSPNPSCVALCPTRELA 204
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 1 RHEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
R+EV + V GYK PTP+Q P ++G++L+
Sbjct: 129 RNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLI 162
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
+RQT+++SAT+P V+ LA D++ Y +I++G A +I Q I+ M K
Sbjct: 300 DRQTMLFSATFPDAVRNLARDFMRPKYCRISVG--MQDAPKSIEQRFIYCSEMDK 352
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 99.5 bits (237), Expect = 7e-20
Identities = 46/82 (56%), Positives = 61/82 (74%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F S + C++GG + Q L +G +I+IA PGRLID L++G T L++ ++LVLDE
Sbjct: 227 FSVGSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDE 286
Query: 443 ADRMLDMGFEPQIRKIIEQIRP 508
ADRMLDMGFEPQIRKI++QIRP
Sbjct: 287 ADRMLDMGFEPQIRKIVDQIRP 308
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
P RQT+++SATWPKEV+KLA D+ + + I IG+++L++N I Q+ +K + K
Sbjct: 308 PQRQTMLFSATWPKEVQKLALDFCKQEPVHIQIGNVELTSNRMIKQIVYVMKAIDK 363
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
QTGSGKTLA++LPAIVHI Q R P L+LAPTREL
Sbjct: 179 QTGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTREL 216
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNLVGV 108
G+K PT IQAQGW IA++G +L+G+
Sbjct: 153 GFKGPTAIQAQGWSIALTGHDLIGI 177
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 99.1 bits (236), Expect = 9e-20
Identities = 54/92 (58%), Positives = 63/92 (68%), Gaps = 5/92 (5%)
Frame = +2
Query: 308 APKREQARDLER-----GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 472
AP RE A +++ GVEIVIATPGRLID +E TNL+R TYLVLDEADRMLDMGFE
Sbjct: 173 APTRELAVQIQQEATKFGVEIVIATPGRLIDMIESHHTNLRRITYLVLDEADRMLDMGFE 232
Query: 473 PQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
PQI+KI+ QIRP + PK+ L R
Sbjct: 233 PQIKKIVSQIRPDRQTLYWSATWPKEVEQLAR 264
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA
Sbjct: 138 ETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELA 179
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
P+RQTL WSATWPKEV++LA ++L D ++ IGS +L ANH I Q
Sbjct: 244 PDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQ 288
Score = 46.8 bits (106), Expect = 5e-04
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
V Q + G+ EPTPIQ+QGWP+A+ G++L+G+
Sbjct: 104 VLQEITKAGFVEPTPIQSQGWPMALRGRDLIGI 136
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 98.7 bits (235), Expect = 1e-19
Identities = 43/77 (55%), Positives = 57/77 (74%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F ++ VR V+GG QAR+LE+G +V+ TPGRL+DF+ KG NL + YL+LDE
Sbjct: 372 FASSTCVRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILDE 431
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGFEP+IRK++
Sbjct: 432 ADRMLDMGFEPEIRKLV 448
Score = 40.7 bits (91), Expect = 0.032
Identities = 18/43 (41%), Positives = 32/43 (74%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
RQTLM+SAT+ E+++LA+++L +Y+ + +G + AN +I Q
Sbjct: 459 RQTLMFSATFAAEIQQLAKEFLSEYVFVTVGRVG-GANSDITQ 500
Score = 39.5 bits (88), Expect = 0.075
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTREL 233
K+ QTGSGKT A++LP + I I G G P A+++ PTREL
Sbjct: 308 KDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTREL 361
Score = 34.3 bits (75), Expect = 2.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
V+ V+ Y PTPIQ PI +SGK+L+G
Sbjct: 281 VRSNVRKAKYDRPTPIQKWAIPIVLSGKDLMG 312
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/74 (62%), Positives = 55/74 (74%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R TC+FGGA + QA DL +V+ATPGRLIDF+E G + R +LVLDEAD+MLD
Sbjct: 227 IRQTCLFGGAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLD 286
Query: 461 MGFEPQIRKIIEQI 502
MGFEPQIRKII I
Sbjct: 287 MGFEPQIRKIIGHI 300
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAXXXXXXXXXXDTHLMFVT 290
+TGSGKT A+++PA+VHI Q P+ RGDGPI LVL+PTRELA +LM +
Sbjct: 170 KTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLM-IR 228
Query: 291 RVCL 302
+ CL
Sbjct: 229 QTCL 232
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
+RQT+M+SATWPKE+++LA D+L D + + IG+ L+ N NI Q+
Sbjct: 303 DRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQV 347
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 98.3 bits (234), Expect = 2e-19
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R + V+GG K EQ ++L+ G EIV+ATPGRLID L+ + R +YLVLDEADRM D
Sbjct: 330 LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD 389
Query: 461 MGFEPQIRKIIEQIRP 508
+GFEPQ+R I+ QIRP
Sbjct: 390 LGFEPQVRSIVGQIRP 405
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA
Sbjct: 273 KTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELA 314
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQTL++SAT P +V+KLA + L D I++ +G + + AN +I Q+
Sbjct: 405 PDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM-ANEDITQV 449
Score = 39.1 bits (87), Expect = 0.099
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
++ +K Y++PT IQ Q PI +SG++++G+ K
Sbjct: 238 QIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAK 273
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 98.3 bits (234), Expect = 2e-19
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R+ CV+GG + EQ +L++GV+I+IATPGRL D NL+ TYLVLDEAD+MLD
Sbjct: 344 LRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLD 403
Query: 461 MGFEPQIRKIIEQIRP 508
MGFEPQI KI+ +RP
Sbjct: 404 MGFEPQIMKILLDVRP 419
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELA 236
QTG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA
Sbjct: 287 QTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELA 329
Score = 47.2 bits (107), Expect = 4e-04
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
EV + +K G+++PTPIQ+Q WPI + G +L+GV
Sbjct: 252 EVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGV 285
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
P+RQT+M SATWP V +LA+ YL + + + +G+L L A ++ Q
Sbjct: 419 PDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQ 463
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/71 (64%), Positives = 55/71 (77%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R+T V+GGA + Q R L G E+VIATPGRLID ++G L R T+LVLDEADRMLD
Sbjct: 189 LRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLD 248
Query: 461 MGFEPQIRKII 493
MGFEPQ+RKII
Sbjct: 249 MGFEPQLRKII 259
Score = 72.9 bits (171), Expect = 7e-12
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
QTGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL
Sbjct: 132 QTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTREL 172
Score = 64.5 bits (150), Expect = 2e-09
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
NRQTLMWSATWP+EV+ LAE Y+ +YIQ+ +G+ +L N I Q+
Sbjct: 265 NRQTLMWSATWPREVRGLAESYMNEYIQVVVGNEELKTNSKIKQI 309
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
EV + G+ EPT IQ QGWP+A+SG+++VG+
Sbjct: 97 EVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGI 130
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLV 433
F + +R CV+GG EQ +L+RG EI++ TPGR+ID L + TNL+R TY+V
Sbjct: 606 FSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVV 665
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRP 508
LDEADRM DMGFEPQ+ +II+ +RP
Sbjct: 666 LDEADRMFDMGFEPQVMRIIDNVRP 690
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTLA+ILP HI +QP + GDG IA+++APTREL
Sbjct: 555 KTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTREL 595
Score = 39.5 bits (88), Expect = 0.075
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
++ +G+++PTPIQ Q P MSG++L+G+ K
Sbjct: 525 LRRLGFEKPTPIQCQAIPAIMSGRDLIGIAK 555
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/33 (42%), Positives = 25/33 (75%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
P+RQT+M+SAT+P++++ LA L I++ +G
Sbjct: 690 PDRQTVMFSATFPRQMEALARRILKKPIEVIVG 722
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 97.5 bits (232), Expect = 3e-19
Identities = 41/76 (53%), Positives = 57/76 (75%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
++ C++GG +R Q + GVEI+IATPGRL D +++G ++ TYL+LDEADRMLD
Sbjct: 208 IKAVCLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLD 267
Query: 461 MGFEPQIRKIIEQIRP 508
MGFEPQIRK++ +RP
Sbjct: 268 MGFEPQIRKVLLDVRP 283
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/44 (68%), Positives = 36/44 (81%), Gaps = 2/44 (4%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELA 236
QTG+GKTLA++LPA++HI Q PI RG+ GP LVLAPTRELA
Sbjct: 151 QTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRELA 193
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQT+M SATWP V++LA+ Y+ D IQ+ IG+L L+A H + Q+
Sbjct: 283 PDRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQV 328
Score = 39.1 bits (87), Expect = 0.099
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ + ++ + PTPIQAQ WPI + G++L+G+
Sbjct: 116 DLMEELRKQKFTTPTPIQAQAWPILLRGEDLIGI 149
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 97.1 bits (231), Expect = 4e-19
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = +2
Query: 290 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 469
+ + GG K Q ++L GV+I+IATPGRLI+ ++K TNLQRCTY+VLDEAD+M +GF
Sbjct: 293 SALLGGENKHHQWKELRAGVDIIIATPGRLIEMVKKKATNLQRCTYIVLDEADQMFSLGF 352
Query: 470 EPQIRKIIEQIRPTDRL 520
E QIR II QIRP ++
Sbjct: 353 EYQIRSIIGQIRPDKQI 369
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKT+AY+ P +VH++ Q + + +GPI LV+ PTREL
Sbjct: 233 KTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVVPTREL 273
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ +++PT IQ+Q P +SG+N++GV K
Sbjct: 203 IVAQNFEKPTAIQSQALPCVLSGRNVIGVAK 233
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 97.1 bits (231), Expect = 4e-19
Identities = 44/79 (55%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 451
+R C +GGA ++Q DL+RG EI++ TPGR+I+ L + TNLQR TY+VLDEADR
Sbjct: 656 LRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADR 715
Query: 452 MLDMGFEPQIRKIIEQIRP 508
M DMGFEPQ+ K+ IRP
Sbjct: 716 MFDMGFEPQVMKVFNNIRP 734
Score = 59.3 bits (137), Expect = 9e-08
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA
Sbjct: 599 KTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELA 640
Score = 35.9 bits (79), Expect = 0.92
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ +GY+ PT IQ Q P MSG++++GV K
Sbjct: 569 ITKLGYERPTSIQMQAIPAIMSGRDVIGVAK 599
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
PNRQT+++SAT P+ + LA+ L ++I +G + A I Q+ + V+ K+K +
Sbjct: 734 PNRQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVA-PEITQI-VEVREEKEKFH 789
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 96.7 bits (230), Expect = 5e-19
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
+ GG K EQ + L+ GVEI+IATPGRL++ ++K TNL+RCTY+V+DEAD+M MGFE
Sbjct: 169 LLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEADKMFSMGFEK 228
Query: 476 QIRKIIEQIRP 508
QIR I++QIRP
Sbjct: 229 QIRSIMQQIRP 239
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL
Sbjct: 107 KTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTREL 147
Score = 37.5 bits (83), Expect = 0.30
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
E+ + + +G+++PT IQ Q P +SG+++VGV K
Sbjct: 72 ELMRQITKLGFEKPTQIQCQALPCGLSGRDIVGVAK 107
Score = 35.9 bits (79), Expect = 0.92
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
P+RQTL+++AT K+++ L D L + + I IG + AN +I Q I K+ K
Sbjct: 239 PDRQTLLFTATLKKKIQNLVMDVLRNPVTIKIGG-ENQANEDIRQEPIIFKDSNFK 293
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 96.7 bits (230), Expect = 5e-19
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = +2
Query: 203 CFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGR 376
C L + ++ + D G S VR CV+GGAPK EQ ++ G +++ATPGR
Sbjct: 102 CLVLAPTRELAQQTAKVFDDAGEASGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATPGR 161
Query: 377 LIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 490
L DF+E+G L R T LVLDEADRMLD+GFEP+IR I
Sbjct: 162 LRDFMEEGVIKLDRVTMLVLDEADRMLDLGFEPEIRAI 199
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELA
Sbjct: 73 TGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELA 112
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = +1
Query: 496 ANTPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
A +RQT+M+SATWP+ V+ LA +++ + I++ IG+ L A+ +I Q+
Sbjct: 202 ATRADRQTVMFSATWPQSVQSLASEFMCNPIKVRIGAEGLKASQSITQI 250
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 28 TMGYKEPTPIQAQGWPIAMSGKNLVGV 108
T +K P+PIQAQ WPI MSG ++VG+
Sbjct: 44 TAQFKTPSPIQAQSWPIIMSGHDMVGI 70
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/76 (57%), Positives = 54/76 (71%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
++ CV+GG + Q DLERG EI+I TPGRL D + ++ TYLVLDEADRMLD
Sbjct: 385 MKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLD 444
Query: 461 MGFEPQIRKIIEQIRP 508
MGFEPQIRK++ IRP
Sbjct: 445 MGFEPQIRKVMLDIRP 460
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
P+RQT+M SATWP V++LA+ Y+ + IQ+ +GSL L+A H++ Q+ +++ K N
Sbjct: 460 PDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFN 517
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLAPTRELA 236
QTG+GKTLA++LP ++H Q P RG G LVLAPTRELA
Sbjct: 328 QTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELA 370
Score = 40.3 bits (90), Expect = 0.043
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ + + MG+ +P+PIQ+Q WPI + G +++G+
Sbjct: 293 DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGI 326
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 96.3 bits (229), Expect = 6e-19
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG ++ V GGA + +Q L GVE+VIATPGRL+D LE L +CTY++LDE
Sbjct: 401 FGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDE 460
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTD 514
ADRMLDMGFEP ++K++E + T+
Sbjct: 461 ADRMLDMGFEPDVQKVLEYMPDTN 484
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELA 236
+TGSGKT A++LP +V I + P + R + GP A+++APTRELA
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
EV Q VK +GY EPTPIQ Q PI + ++++GV
Sbjct: 311 EVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 96.3 bits (229), Expect = 6e-19
Identities = 44/97 (45%), Positives = 64/97 (65%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
L + ++T + F + S +R ++GG EQ R+L+RG +++ATPGRL D +
Sbjct: 384 LAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMI 443
Query: 392 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 502
+G L+ +LVLDEADRMLDMGFEPQIR+I+EQ+
Sbjct: 444 TRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQL 480
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +1
Query: 502 TPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
T RQTLM+SAT+PK++++LA D+L +YI + +G + S + NI Q ++V K+
Sbjct: 485 TGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVG-STSENITQTILWVYEPDKR 540
Score = 39.1 bits (87), Expect = 0.099
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 10/52 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTRELA 236
QTGSGKT A+++P + + + PP RR P+ LVLAPTRELA
Sbjct: 340 QTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELA 391
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 95.9 bits (228), Expect = 8e-19
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
S F + S +R ++GG ++Q RDLERG +++ATPGRL D + +G L +LV
Sbjct: 403 SKKFCYRSRMRPAVLYGGNNTQDQMRDLERGCHLIVATPGRLEDMIGRGKVGLDNIRFLV 462
Query: 434 LDEADRMLDMGFEPQIRKIIEQIR 505
LDEADRMLDMGFEPQIR+I+E+ R
Sbjct: 463 LDEADRMLDMGFEPQIRRIVEESR 486
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 502 TPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFV-KNMKK 669
T RQTLM+SAT+PK +++LA D+L YI + +G + S + NI Q +V +N+K+
Sbjct: 490 TGERQTLMFSATFPKAIQELASDFLYRYIFLAVGRVG-STSVNITQTIFWVEENIKR 545
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 95.1 bits (226), Expect = 1e-18
Identities = 48/83 (57%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL-EKGTTNLQRCTYLVLD 439
FG S R +FGG KR+Q + L G EIV+ATPGRL+D L K +TNL+R TYL LD
Sbjct: 154 FG-VSGARCCAIFGGVSKRDQFKKLRAGAEIVVATPGRLVDVLCMKNSTNLRRVTYLALD 212
Query: 440 EADRMLDMGFEPQIRKIIEQIRP 508
EADRMLDMGFE +R I + +RP
Sbjct: 213 EADRMLDMGFEKIVRSICQAVRP 235
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LPA I+ Q P+ + +GPIALVLAPTRELA
Sbjct: 100 KTGSGKTLAFLLPAYAQISRQRPLTKREGPIALVLAPTRELA 141
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQL 642
P+RQ +M+SAT P +++LA D L D + ++IG++ AN ++ Q+
Sbjct: 235 PDRQCVMFSATMPAAMQRLARDVLARDAVTVSIGNVG-GANEDVRQV 280
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDM 463
C +GG EQ DL+RG EIV+ TPGR+ID L + TNL+R TYLVLDEADRM D
Sbjct: 410 CTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDK 469
Query: 464 GFEPQIRKIIEQIRP 508
GFEPQI K++ IRP
Sbjct: 470 GFEPQIMKVVNNIRP 484
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELA 390
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+K Y +PT IQAQ P MSG++++G+ K
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAK 349
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCTYLVLDEADR 451
+R CV+GGA EQ +L+RG +IV+ TPGR+ID L + TNL+R T+LVLDEADR
Sbjct: 611 LRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADR 670
Query: 452 MLDMGFEPQIRKIIEQIRP 508
M DMGF PQI I++ IRP
Sbjct: 671 MFDMGFGPQINCIVDSIRP 689
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LP HI QP G+G IAL+++PTRELA
Sbjct: 554 RTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELA 595
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+K Y++PT IQAQ P M+G++L+G+ +
Sbjct: 524 LKKFQYEKPTSIQAQTIPAIMNGRDLIGIAR 554
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
P+RQT+M+SAT+P +V+ +A+ L ++I G
Sbjct: 689 PDRQTIMFSATFPPKVENVAKKILNKPLEIIAG 721
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 94.7 bits (225), Expect = 2e-18
Identities = 38/72 (52%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Frame = +2
Query: 293 CVFGGAP-KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 469
C++GG P K++Q +++G+ +++ATPGRLI+ +++G NL + T L+LDEADRMLDMGF
Sbjct: 181 CIYGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGF 240
Query: 470 EPQIRKIIEQIR 505
EPQ+R I+ IR
Sbjct: 241 EPQVRDIVSTIR 252
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
QTGSGKTLAY+LPA+VH+ I P L+L PTREL
Sbjct: 104 QTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTREL 144
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
+RQT++ SATWP EV++L++++ D I + IG
Sbjct: 254 DRQTILLSATWPNEVQQLSKEFCYDPILVKIG 285
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 94.7 bits (225), Expect = 2e-18
Identities = 45/80 (56%), Positives = 54/80 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG +R V GG + +Q L G EIVIATPGRLID LE L RCTY+VLDE
Sbjct: 491 FGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDE 550
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
ADRM+DMGFEP ++KI+E +
Sbjct: 551 ADRMIDMGFEPDVQKILEHM 570
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELA 236
+TGSGKT A+++P +V I P I R GP A++LAPTRELA
Sbjct: 436 ETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELA 481
Score = 37.5 bits (83), Expect = 0.30
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNLVGV 108
GYKEPTPIQ Q PI + ++++GV
Sbjct: 410 GYKEPTPIQRQAIPIGLQNRDIIGV 434
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 94.3 bits (224), Expect = 2e-18
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C YLVLD
Sbjct: 245 FSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLD 304
Query: 440 EADRMLDMGFEPQIRKIIEQIRP 508
EADRMLDMGFEPQIRKI+ Q P
Sbjct: 305 EADRMLDMGFEPQIRKIVGQGMP 327
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
R T M+SAT+PKE++ LA+D+L D YI + +G + S + NI Q ++V M+K+ N
Sbjct: 332 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSN 387
Score = 41.9 bits (94), Expect = 0.014
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 10/52 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 236
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 235
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 93.9 bits (223), Expect = 3e-18
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+++ C++GG + Q +DL +G +I+IATPGRL D L+ TYLVLDEAD+MLD
Sbjct: 343 LKSVCIYGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLD 402
Query: 461 MGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLRITWEI-TFRSI*DHY 610
MGFEPQI KI+ +RP DR L K + + +++ FRS+ DHY
Sbjct: 403 MGFEPQIMKILLDVRP-DRQTVMTSLPVCKVEPVEQNSFDFRAFRSVADHY 452
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/43 (58%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELA 236
QTG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA
Sbjct: 286 QTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELA 328
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
EV + ++ G+++PTPIQ+Q WPI + G +L+GV
Sbjct: 251 EVMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGV 284
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/76 (55%), Positives = 55/76 (72%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
++ C++GG +R Q ++ GVEI+IATPGRL D + ++ TYLVLDEADRMLD
Sbjct: 426 IKAICLYGGGDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLD 485
Query: 461 MGFEPQIRKIIEQIRP 508
MGFEPQIRK++ IRP
Sbjct: 486 MGFEPQIRKLLLDIRP 501
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELA 236
QTG+GKTLA++LPA +HI Q P+ RG+ GP LV+APTRELA
Sbjct: 368 QTGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRELA 411
Score = 55.6 bits (128), Expect = 1e-06
Identities = 21/45 (46%), Positives = 34/45 (75%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
P+RQT+M SATWP V++LA+ Y+ + +Q+ +G+L L+A H + Q
Sbjct: 501 PDRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGTLDLAATHTVTQ 545
Score = 44.0 bits (99), Expect = 0.003
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ + +K G+ +P+PIQAQ WP+ + G++L+G+
Sbjct: 333 ELLEEIKKQGFAKPSPIQAQAWPVLLKGEDLIGI 366
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 93.5 bits (222), Expect = 4e-18
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 451
+ + C FGG+ Q +L++G +I++ TPGR+ID L + TNLQR TYLVLDEADR
Sbjct: 419 ISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADR 478
Query: 452 MLDMGFEPQIRKIIEQIRP 508
M DMGFEPQ+ K+ ++RP
Sbjct: 479 MFDMGFEPQVTKVFTRVRP 497
Score = 70.1 bits (164), Expect = 5e-11
Identities = 28/42 (66%), Positives = 37/42 (88%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA
Sbjct: 362 KTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELA 403
Score = 35.9 bits (79), Expect = 0.92
Identities = 16/57 (28%), Positives = 37/57 (64%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
P+RQT+++SAT+P++++ LA+ L + ++I +G + + A+ ++ +F K +
Sbjct: 497 PDRQTVLFSATFPRKMELLAKKILDNPMEIVVGGISVVASEITQKVELFENEDDKSL 553
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 31 MGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ Y P+ IQAQ P MSG++++GV K
Sbjct: 335 LNYSSPSSIQAQAIPAIMSGRDIIGVAK 362
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/79 (56%), Positives = 55/79 (69%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + S VR V+GG R Q +D+ +G +++ATPGRL D LE+ L YLVLDE
Sbjct: 314 FSYRSLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDE 373
Query: 443 ADRMLDMGFEPQIRKIIEQ 499
ADRMLDMGFEPQIRKI+EQ
Sbjct: 374 ADRMLDMGFEPQIRKIVEQ 392
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
RQTLM+SAT+P+E++ LA D+L DY+ + +G + S + NI Q ++V +K+
Sbjct: 401 RQTLMFSATFPREIQMLASDFLKDYLFLRVGKVG-STSQNITQRIVYVDENEKR 453
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 7/49 (14%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELA 236
QTGSGKT A+++P + + P + + P+AL+LAPTRELA
Sbjct: 256 QTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELA 304
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLV 433
F T ++ C +GG+ Q +L+RGV +++ATPGRLID L T L+R T++V
Sbjct: 484 FSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVV 543
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRP 508
LDEADRM DMGFEPQI+KI QIRP
Sbjct: 544 LDEADRMFDMGFEPQIQKIFTQIRP 568
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA
Sbjct: 433 KTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELA 474
Score = 37.1 bits (82), Expect = 0.40
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 31 MGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+G+ +P+PIQ Q PI +SG++++GV K
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGRDMIGVAK 433
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/49 (30%), Positives = 36/49 (73%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IF 651
P++QT+++SAT+P+++++LA+ L + I+I +G + + A+ ++ +F
Sbjct: 568 PDKQTVLFSATFPRKLEQLAKKVLHNPIEIIVGGVSVVASEISQEIILF 616
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 92.7 bits (220), Expect = 8e-18
Identities = 47/89 (52%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLV 433
FG +R+ VFGG Q L+RG EIV+ TPGR+ID L TNL+R T++V
Sbjct: 236 FGKYLNIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVV 295
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRPTDRL 520
LDEADRM DMGF PQI++IIE IRP ++
Sbjct: 296 LDEADRMFDMGFGPQIKRIIEGIRPDKQI 324
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA
Sbjct: 185 KTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELA 226
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 92.7 bits (220), Expect = 8e-18
Identities = 42/74 (56%), Positives = 55/74 (74%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
++N V GG +Q +L GVEI +ATPGR ID L++G T+L R +Y+VLDEADRMLD
Sbjct: 221 LKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLD 280
Query: 461 MGFEPQIRKIIEQI 502
MGFEPQIR+I+ +
Sbjct: 281 MGFEPQIREIMRSL 294
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELA
Sbjct: 163 ETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELA 204
Score = 39.9 bits (89), Expect = 0.056
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +1
Query: 514 QTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
QTL++SAT P E++ LA++YL + +Q+ +G + S N+ Q + V +K
Sbjct: 299 QTLLFSATMPVEIEALAKEYLANPVQVKVGKVS-SPTTNVSQTLVKVSGSEK 349
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVG 105
Y P+ IQAQ PIA+SG++L+G
Sbjct: 138 YTRPSSIQAQAMPIALSGRDLLG 160
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 92.7 bits (220), Expect = 8e-18
Identities = 44/95 (46%), Positives = 61/95 (64%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
L + ++T + F + S +R ++GG EQ R+L+RG +++ATPGRL D +
Sbjct: 356 LAPTRELATQIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDII 415
Query: 392 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 496
+G L+ +LVLDEADRMLDMGFEPQIR IIE
Sbjct: 416 NRGKIGLENLRFLVLDEADRMLDMGFEPQIRHIIE 450
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +1
Query: 502 TPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
T RQTLM+SAT+PK +++LA D+L +YI + +G + S + NI Q ++V +K+
Sbjct: 457 TGQRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVG-STSENITQTILWVNENEKR 512
Score = 40.7 bits (91), Expect = 0.032
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 10/52 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKT A+++P + + +N+P RR P+ LVLAPTRELA
Sbjct: 312 QTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELA 363
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 92.3 bits (219), Expect = 1e-17
Identities = 39/72 (54%), Positives = 55/72 (76%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R ++GG+ R Q DL+RG +I++ATPGRL D +++G NL+ +L+LDEADRMLD
Sbjct: 313 IRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLD 372
Query: 461 MGFEPQIRKIIE 496
MGF PQIR+I+E
Sbjct: 373 MGFAPQIREIVE 384
Score = 42.7 bits (96), Expect = 0.008
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 10/52 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPTRELA 236
QTGSGKT A++ P ++ +N+ PP I+R P+ALVL+PTRELA
Sbjct: 246 QTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELA 297
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/53 (35%), Positives = 39/53 (73%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
RQT+M+SAT+P+E+++LA+D+L +YI + +G + ++ +I+Q ++ + K
Sbjct: 395 RQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSG-SIVQRVVYAEEDHK 446
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 92.3 bits (219), Expect = 1e-17
Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = +2
Query: 245 SASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQ 415
S S+ F ++ ++GGA EQ L+RG EIVI TPGRLID L KG TNL+
Sbjct: 458 SNESSKFSRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIGTPGRLIDVLTLSKGKVTNLR 517
Query: 416 RCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 508
R T+LVLDEADRM DMGF PQI I+ IRP
Sbjct: 518 RVTFLVLDEADRMFDMGFAPQISAIVGNIRP 548
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTLA++LPAI H +QP +R DG I LV+APTREL
Sbjct: 413 ETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTREL 453
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
P+RQT ++SAT+P ++ LA+ L +QI +G SA+ + + V N +KK+
Sbjct: 548 PDRQTALFSATFPIMIENLAKKILAKPLQIVVGQRGKSASQ--VDQHVLVLNEEKKL 602
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 91.9 bits (218), Expect = 1e-17
Identities = 46/79 (58%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDM 463
C GGA Q DL+RG EIV+ TPGR+ID L TNL+R TY+V+DEADRM D+
Sbjct: 610 CCVGGAGIAGQLSDLKRGTEIVVCTPGRMIDVLTTSNGKITNLRRVTYVVIDEADRMFDL 669
Query: 464 GFEPQIRKIIEQIRPTDRL 520
GFEPQI KII+ IRP +L
Sbjct: 670 GFEPQICKIIQNIRPDRQL 688
Score = 67.7 bits (158), Expect = 2e-10
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
++F +TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELA 590
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
P+RQ +M+SAT+PK V++LA+ L I+ +G + A NI Q+ F+ K
Sbjct: 684 PDRQLVMFSATFPKNVEQLAKRVLRKPIECIVGG-RGQAGGNIEQIIEFMDESDK 737
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 91.5 bits (217), Expect = 2e-17
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+ + Y ++ C++GG + EQ GVEIVIATPGRL D G +L TY+VLDE
Sbjct: 186 YSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDE 244
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDRL 520
ADRMLDMGFE IR+I+ +IRP DRL
Sbjct: 245 ADRMLDMGFEVAIRRILFEIRP-DRL 269
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELA 236
+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELA
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELA 176
Score = 38.3 bits (85), Expect = 0.17
Identities = 12/29 (41%), Positives = 24/29 (82%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ G+++P+PIQ+Q WP+ +SG++ +GV
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGV 127
Score = 37.5 bits (83), Expect = 0.30
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFV 654
P+R + SATWP+ V+KL + Y + + GSL L++ ++ Q FV
Sbjct: 266 PDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFV 315
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/74 (58%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 466
V+GG+ +Q +L+RG EIV+ TPGR+ID L + TNL+R TYLV+DEADRM DMG
Sbjct: 503 VYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMG 562
Query: 467 FEPQIRKIIEQIRP 508
FEPQI +I++ IRP
Sbjct: 563 FEPQITRIVQNIRP 576
Score = 66.1 bits (154), Expect = 8e-10
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL
Sbjct: 441 KTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTREL 481
Score = 39.9 bits (89), Expect = 0.056
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+K + Y++P PIQAQ PI MSG++ +GV K
Sbjct: 411 LKKLNYEKPMPIQAQALPIIMSGRDCIGVAK 441
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQT+++SAT+P++V+ LA L ++I +G + N +I QL
Sbjct: 576 PDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQL 620
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 91.1 bits (216), Expect = 2e-17
Identities = 46/114 (40%), Positives = 69/114 (60%)
Frame = +2
Query: 167 QPTAYSER*WSDCFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERG 346
QP + ER L + ++ A + + + +++ CV+GG ++EQ + + +G
Sbjct: 370 QPISREERNGPGMLVLTPTRELALQVEAECSKYSYKG-LKSVCVYGGGNRKEQIQHITKG 428
Query: 347 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 508
V+I+IATPGRL D NL+ TYLVLDEAD+MLD+GFE QI KI+ +RP
Sbjct: 429 VDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQITKILLDVRP 482
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELA 236
QTG+GKTL+Y++P +H+++QP R +GP LVL PTRELA
Sbjct: 350 QTGTGKTLSYLIPGFIHLDSQPISREERNGPGMLVLTPTRELA 392
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
P+RQT+M SATWP +++LA YL + + + +G+L L A H + Q
Sbjct: 482 PDRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLVAVHTVKQ 526
Score = 46.4 bits (105), Expect = 7e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
EV + +K G++ PTPIQ+Q WPI + G +L+GV
Sbjct: 315 EVLKSIKKAGFQRPTPIQSQAWPIVLQGMDLIGV 348
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/79 (55%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 451
+R V+GG+ +Q +L+RG EIV+ TPGR+ID L + TNL+R T+LV+DEADR
Sbjct: 631 IRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADR 690
Query: 452 MLDMGFEPQIRKIIEQIRP 508
M DMGFEPQI +II+ IRP
Sbjct: 691 MFDMGFEPQITRIIQNIRP 709
Score = 66.1 bits (154), Expect = 8e-10
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL
Sbjct: 574 KTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTREL 614
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+K + Y++P PIQ Q PI MSG++ +GV K
Sbjct: 544 MKKLNYEKPMPIQTQALPIIMSGRDCIGVAK 574
Score = 38.3 bits (85), Expect = 0.17
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P RQT+++SAT+P++V+ LA L ++I +G + N +I QL
Sbjct: 709 PERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQL 753
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 90.6 bits (215), Expect = 3e-17
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 466
V+GG+ Q DL+RG EIV TPGR+ID L G+ TNL+R TY+VLDEADRM DMG
Sbjct: 224 VYGGSGIAAQIGDLKRGAEIVACTPGRMIDLLTTGSGKITNLRRVTYMVLDEADRMFDMG 283
Query: 467 FEPQIRKIIEQIRP 508
FEPQI +I+ +RP
Sbjct: 284 FEPQITRILANLRP 297
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL
Sbjct: 162 KTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTREL 202
Score = 39.9 bits (89), Expect = 0.056
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ V + ++ G+++P PIQAQ P+ MSG++ +GV K
Sbjct: 126 NRVHELIRRSGFEKPMPIQAQALPVIMSGRDCIGVAK 162
Score = 35.9 bits (79), Expect = 0.92
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQT+M+SAT+P ++ LA L + I+I IG + N +I QL
Sbjct: 297 PDRQTVMFSATFPHTMEALARAALDNPIEIQIGGKSV-VNSDIEQL 341
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADR 451
+R C GG+ ++Q DL+RGVEIV+ATPGRLID L + L +R T++V+DEADR
Sbjct: 381 IRTICCTGGSEMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKRITFVVMDEADR 440
Query: 452 MLDMGFEPQIRKIIEQIRP 508
+ DMGFEPQI +I++ +RP
Sbjct: 441 LFDMGFEPQITQIMKTVRP 459
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELA 236
++TGSGKT++YILP + I Q + + + GP+ L+LAPTRELA
Sbjct: 321 SKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELA 364
Score = 36.3 bits (80), Expect = 0.70
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 25 KTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
K + Y EPT IQ+Q P MSG++L+G+ K
Sbjct: 293 KELKYDEPTAIQSQAIPAIMSGRDLIGISK 322
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 90.2 bits (214), Expect = 4e-17
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 463
++ C++GG + Q L EIV ATPGRLIDFL+ G N R +LVLDEADRMLDM
Sbjct: 188 KHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDEADRMLDM 247
Query: 464 GFEPQIRKIIEQI 502
GFEPQIR II +
Sbjct: 248 GFEPQIRAIIASL 260
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA
Sbjct: 130 KTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELA 171
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/56 (39%), Positives = 39/56 (69%)
Frame = +1
Query: 502 TPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
T +R+T M+SATWPKE+++LA D+L + I +++G +L+ N I Q + ++ +K
Sbjct: 261 TKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELATNERIQQNVLLLQEHEK 316
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
E+ + +K + PTPIQ+ PI + G ++VG+ K
Sbjct: 95 EIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAK 130
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 89.4 bits (212), Expect = 7e-17
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 430
S F + + + + ++GG ++Q L G I+IATPGRL+D +E+G L+ C YL
Sbjct: 263 SRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLLDVMEQGLIGLEGCRYL 322
Query: 431 VLDEADRMLDMGFEPQIRKIIE 496
VLDEADRMLDMGFEPQIR+++E
Sbjct: 323 VLDEADRMLDMGFEPQIRQVVE 344
Score = 40.3 bits (90), Expect = 0.043
Identities = 21/55 (38%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
R T M+SAT+PKE++ LA+D+L +Y+ + +G + S + NI+Q ++V+ +K+
Sbjct: 354 RVTAMFSATFPKEIQLLAQDFLKQNYVFLAVGRVG-STSENIMQKIVWVEEDEKR 407
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 89.0 bits (211), Expect = 9e-17
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
+G + + T + +G V+GG+ Q +L+RG EIV TPGR+ID L
Sbjct: 409 MGPTRELVTQIGKEAKRYGKALGFNAVSVYGGSGIAAQIGELKRGAEIVACTPGRMIDIL 468
Query: 392 EKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 508
G TNL+R TY+VLDEADRM DMGFEPQI +I+ +RP
Sbjct: 469 TTGGGKITNLRRVTYIVLDEADRMFDMGFEPQITRILANLRP 510
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL
Sbjct: 375 KTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTREL 415
Score = 38.7 bits (86), Expect = 0.13
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ + ++ G+++P PIQAQ P+ MSG++ +G+ K
Sbjct: 341 IHELIRRCGFEKPMPIQAQALPVIMSGRDCIGIAK 375
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
P+RQT+M+SAT+P ++ LA L + ++I IG
Sbjct: 510 PDRQTVMFSATFPHTMEALARAALENPVEIQIG 542
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 89.0 bits (211), Expect = 9e-17
Identities = 44/79 (55%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL--EKG-TTNLQRCTYLVLDEADR 451
+R V+GG+P EQ L+RGVEIV TPGRLI+ L G TNL+R T++V+DEADR
Sbjct: 490 IRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVIDEADR 549
Query: 452 MLDMGFEPQIRKIIEQIRP 508
M D+GF PQI I++ IRP
Sbjct: 550 MFDLGFSPQISAIVDNIRP 568
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA
Sbjct: 433 ETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELA 474
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 624
P+RQT ++SAT+P ++ LA+ L +QI +G SA+
Sbjct: 568 PDRQTALFSATFPPTIEALAKKILTKPLQIIVGESGKSAS 607
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 89.0 bits (211), Expect = 9e-17
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 451
+R +C GG+ E +++G E+VI TPGR+ID L TN++R TY+V+DEADR
Sbjct: 505 IRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADR 564
Query: 452 MLDMGFEPQIRKIIEQIRPT 511
M DMGFEPQ+ KII +RP+
Sbjct: 565 MFDMGFEPQVMKIINNVRPS 584
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/42 (54%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+A++LP + H+ +Q P+ +GPIA+V++PTRELA
Sbjct: 448 KTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELA 489
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+K G++ PT IQAQ P MSG++++G+ K
Sbjct: 418 IKHQGWETPTSIQAQAIPAIMSGRDVIGIAK 448
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + +R+ CV+GG+ Q +++ +G +I++ATPGRL+ F EK +L YL+ DE
Sbjct: 235 FTEDTPIRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDE 294
Query: 443 ADRMLDMGFEPQIRKIIE 496
ADRMLDMGFEPQIR+I E
Sbjct: 295 ADRMLDMGFEPQIREICE 312
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
RQTLM+SAT+PK++++LA D+L DY+ I +G S +I Q+ ++V+ K+
Sbjct: 322 RQTLMFSATFPKQIQRLAADFLDDYVFITVGRAG-STVESIQQIILWVEEEIKQ 374
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTREL 233
QTGSGKT A++ P I I PP+ R P+AL+LAPTREL
Sbjct: 176 QTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTREL 224
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 88.6 bits (210), Expect = 1e-16
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +2
Query: 293 CVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 469
C +GG K EQ+ +L+ G E+V+ TPGR+ID ++ G TN R T+LV DEADRM DMGF
Sbjct: 371 CAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGF 430
Query: 470 EPQIRKIIEQIRP 508
E Q++ I + +RP
Sbjct: 431 EAQVKSISDHVRP 443
Score = 64.1 bits (149), Expect = 3e-09
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELA 351
Score = 50.4 bits (115), Expect = 4e-05
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 7/230 (3%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK----RVPAKRWPTSCQPLCT*TTNR 177
+ + ++ Y++PTPIQA P A+SG++++G+ K + A WP +
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 178 LFGEVMVRLLWSWRLPES*HNKFSKFCRFWT-HILCS*HVCVWWCS*KRASPGLGEGSRN 354
G V V ++ + L + KFC+ + + +C+ W ++++ EG+
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKW---EQSNELQNEGAEM 392
Query: 355 SHCYSR*IN*FLGKGHNQL--TAVHIFSS**G*SYVGYGI*TTNQKNH*ANTPNRQTLMW 528
C I + G T +F +G+ + +H P+RQ LM+
Sbjct: 393 VVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDH--VRPDRQCLMF 450
Query: 529 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
SAT+ ++V++LA D L D ++I G + AN +I Q ++N K++
Sbjct: 451 SATFKQKVERLARDALVDPVRIVQGEVG-EANADIEQKVFVMQNQDVKLH 499
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/80 (52%), Positives = 53/80 (66%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FGH VR + GG +QA L + EIVIATPGRL+D LE+G L LVLDE
Sbjct: 94 FGHARRVRGAVIIGGVGMAQQAEALRQKREIVIATPGRLVDHLEQGNARLDGIEALVLDE 153
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
ADRMLDMGF+PQ+ +I+ ++
Sbjct: 154 ADRMLDMGFKPQLDRILRRL 173
Score = 39.5 bits (88), Expect = 0.075
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +3
Query: 33 GLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 212
G + + + + K+ TG+GKT A++LP I + +P G ALV
Sbjct: 23 GFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDRLAGKP------GTRALV 76
Query: 213 LAPTRELA 236
LAPTRELA
Sbjct: 77 LAPTRELA 84
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
E ++ G++ PTPIQAQ P A++GK+++G
Sbjct: 14 EALAALRRAGFEHPTPIQAQAIPPALAGKDVIG 46
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + VR +GG Q RDL+RG I+IATPGRL+DF+ +G L +++LDE
Sbjct: 413 FSRGTVVRPVVAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDE 472
Query: 443 ADRMLDMGFEPQIRKI 490
ADRMLDMGFE +IRK+
Sbjct: 473 ADRMLDMGFETEIRKL 488
Score = 35.9 bits (79), Expect = 0.92
Identities = 15/33 (45%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYL-GDYIQINIG 603
+R TLM+SAT+P E+++LA D+L D++ + +G
Sbjct: 499 DRHTLMFSATFPDEIQRLAHDFLREDFLFLTVG 531
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVH-INN---QPPIRRGDGPIALVLAPTREL 233
QTGSGKT A++LP + I N P A+V+ PTREL
Sbjct: 358 QTGSGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTREL 402
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/78 (50%), Positives = 53/78 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + VR V+GGA R Q +L RG ++++ATPGRL+D +G +L+LDE
Sbjct: 259 FTYHTPVRCVVVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDE 318
Query: 443 ADRMLDMGFEPQIRKIIE 496
ADRMLDMGFEPQIR I++
Sbjct: 319 ADRMLDMGFEPQIRMIVQ 336
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 6/48 (12%)
Frame = +3
Query: 111 QTGSGKTLAYILPAI----VHINNQPPIRRG--DGPIALVLAPTRELA 236
QTGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+
Sbjct: 202 QTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELS 249
Score = 34.7 bits (76), Expect = 2.1
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
RQTL++SAT+P E+++LA +++ + + +G + S NI Q
Sbjct: 348 RQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVG-STTENITQ 389
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/79 (55%), Positives = 53/79 (67%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 463
R V GG QA +L RGVEIVI TPGRL D LEK T L +C Y++LDEADRM+DM
Sbjct: 804 RTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDM 863
Query: 464 GFEPQIRKIIEQIRPTDRL 520
GFE + I+++I PT L
Sbjct: 864 GFEDTVHYILDKI-PTSNL 881
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELA 236
+TGSGKT A++LP + ++ PP+ DGP ALV+AP+RELA
Sbjct: 743 ETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELA 787
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+++ + +K Y++PTPIQ Q PIA+ ++L+G+
Sbjct: 707 NDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGI 741
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
++GGAP+R Q L R +IV+ TPGR+IDF+E G +L+ ++LV+DEADR+++MGFE
Sbjct: 246 IYGGAPRRSQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQ 305
Query: 476 QIRKIIEQIRPTDRL*CGQLLGPKK 550
QI I IRP ++ PKK
Sbjct: 306 QIDGIFNSIRPDRQVLYWSATWPKK 330
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
P+RQ L WSATWPK+V AE ++ I++ IGS QL+AN NI Q
Sbjct: 316 PDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQ 360
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
++TGSGKTL++ILPAI HI QP GP LV+APTRELA
Sbjct: 183 SKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELA 225
Score = 40.7 bits (91), Expect = 0.032
Identities = 13/26 (50%), Positives = 23/26 (88%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGVLK 114
+++PTP+Q+ GWPIA+SG +++G+ K
Sbjct: 159 FEKPTPVQSLGWPIALSGSDMLGISK 184
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/76 (52%), Positives = 52/76 (68%)
Frame = +2
Query: 275 SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 454
+++R+ V GG R Q D RG +IATPGRL D ++G +L+ C LV+DEADRM
Sbjct: 204 THLRSVSVIGGVDARSQINDASRGCHALIATPGRLKDLTDRGIFSLKYCNKLVIDEADRM 263
Query: 455 LDMGFEPQIRKIIEQI 502
LDMGFEPQIR+II +
Sbjct: 264 LDMGFEPQIREIINNL 279
Score = 36.3 bits (80), Expect = 0.70
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 10/51 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTREL 233
+TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL
Sbjct: 139 ETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTREL 189
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/79 (50%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADR 451
+R+ C GG+ + Q D++RGVEIVIATPGR ID L + NL +R ++V+DEADR
Sbjct: 341 IRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNLINPKRIVFVVMDEADR 400
Query: 452 MLDMGFEPQIRKIIEQIRP 508
+ D+GFEPQ+ +I++ IRP
Sbjct: 401 LFDLGFEPQVNQIMKCIRP 419
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELA 236
++TGSGKT+++ILP + I Q P+ GD GP+ L+L+PTRELA
Sbjct: 281 SKTGSGKTVSFILPLLRQIKAQRPL-GGDETGPLGLILSPTRELA 324
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 25 KTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+ + + PTPIQAQ P MSG++++G+ K
Sbjct: 253 RELEFTVPTPIQAQAIPAIMSGRDVIGISK 282
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 87.0 bits (206), Expect = 4e-16
Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 466
VFGG + Q +L+RG EIV+ATPGRLID L TNL+R T +V+DEADRM D+G
Sbjct: 814 VFGGTGIKGQLSELKRGCEIVVATPGRLIDVLTTSNGKITNLKRITMVVIDEADRMFDLG 873
Query: 467 FEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
FEPQI KI+ RP + PK NL +
Sbjct: 874 FEPQIAKILATTRPDKQTVLFSATFPKNVENLAK 907
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA
Sbjct: 752 ETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELA 793
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 87.0 bits (206), Expect = 4e-16
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F H R T + GG EQ + +G EIVIATPGRLID LE+ L +C Y+VLDE
Sbjct: 412 FAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDE 471
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDRL 520
ADRM+DMGFEPQ+ +++ + P+ L
Sbjct: 472 ADRMIDMGFEPQVAGVLDAM-PSSNL 496
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELA 236
+TGSGKT A++LP + +I+ PP+ +GP A+V+APTRELA
Sbjct: 358 ETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELA 402
Score = 32.7 bits (71), Expect = 8.6
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ + V+ GYK+P+PIQ P+ + ++++G+
Sbjct: 323 ELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGI 356
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDM 463
C +GG+P ++Q L++G I++ TPGR+ID L +L R T+LV+DEADRM DM
Sbjct: 492 CAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDM 551
Query: 464 GFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
GFEPQ+ K+ + IRP + PKK L R
Sbjct: 552 GFEPQVLKLTQSIRPDRQTVLFSATFPKKMEQLAR 586
Score = 36.3 bits (80), Expect = 0.70
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR--------RGDGPIALVLAPTREL 233
+TGSGKTLA++LP + HI ++ + P+ +++ PTREL
Sbjct: 423 KTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTREL 471
Score = 33.1 bits (72), Expect = 6.5
Identities = 13/37 (35%), Positives = 27/37 (72%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQL 615
P+RQT+++SAT+PK++++LA L ++G +++
Sbjct: 566 PDRQTVLFSATFPKKMEQLARRVLSKRSSDSLGPIEI 602
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 472
C+ GG P EQA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMGFE
Sbjct: 306 CI-GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFE 364
Query: 473 PQIRKI 490
+I+ I
Sbjct: 365 DEIKSI 370
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA 236
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELA 279
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
RQTL++SAT P++++ A+ L I +N+G +A+ N+LQ FV++ K +
Sbjct: 378 RQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAG-AASLNVLQELEFVRSENKLV 431
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 25 KTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
K G PT IQ QG P+A+SG++++G+
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGI 233
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 86.2 bits (204), Expect = 7e-16
Identities = 45/79 (56%), Positives = 54/79 (68%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R C +GG K +Q+R L GV+IVI TPGRL D L K +L YLVLDEADRMLD
Sbjct: 213 IRQLCAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDEADRMLD 270
Query: 461 MGFEPQIRKIIEQIRPTDR 517
MGF PQI +I+QI P +R
Sbjct: 271 MGFMPQIESLIDQI-PKER 288
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
RQTLM+SATWPKEVK LA +L D I+I +GS +L+ + N+ Q
Sbjct: 288 RQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQ 330
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELA 236
TGSGKTLA++LPA++ I + P G P+ LV+APTRELA
Sbjct: 156 TGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELA 197
Score = 34.7 bits (76), Expect = 2.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNLVGV 108
G+ PT IQ Q WPI + G +LVG+
Sbjct: 129 GFTAPTVIQGQSWPIILGGNDLVGL 153
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 85.8 bits (203), Expect = 9e-16
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL---QRCTYLVLDEADR 451
+R+ C GG+ ++Q DL+RG EIV+ATPGR ID L L +R T++V+DEADR
Sbjct: 360 IRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADR 419
Query: 452 MLDMGFEPQIRKIIEQIRP 508
+ D+GFEPQI +I++ +RP
Sbjct: 420 LFDLGFEPQITQIMKTVRP 438
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/44 (50%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELA 236
++TGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA
Sbjct: 300 SKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELA 343
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/83 (51%), Positives = 58/83 (69%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
HT +R+ VFGG Q +L RGVEI+IATPGRL+D +++ T NL + LVLDEAD
Sbjct: 113 HTP-LRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEAD 171
Query: 449 RMLDMGFEPQIRKIIEQIRPTDR 517
RMLDMGF P +++I+ + P +R
Sbjct: 172 RMLDMGFLPDLQRIL-NLLPKER 193
Score = 37.1 bits (82), Expect = 0.40
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
E+ + + GY PTPIQA+ P+ +SG++++G
Sbjct: 21 EILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMG 53
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDG--PI-ALVLAPTRELA 236
QTG+GKT ++ LP I + Q P+ AL+L PTRELA
Sbjct: 56 QTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELA 100
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSAN 624
RQTL++SAT+ E+KKLA YL + I + +A+
Sbjct: 193 RQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAAS 230
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = +2
Query: 290 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 469
T V+GG +Q DL+RGV++V ATPGRL+D +E+GT L LVLDE DRMLDMGF
Sbjct: 233 TVVYGGVGYGKQREDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGF 292
Query: 470 EPQIRKIIEQ 499
P +++I++Q
Sbjct: 293 LPDVKRIVQQ 302
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
V MGY EPTPIQAQ P ++G+++ G
Sbjct: 148 VTEMGYTEPTPIQAQAVPAVLAGRDVTG 175
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/101 (43%), Positives = 60/101 (59%)
Frame = +2
Query: 266 GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 445
G S N C+ GG+ +EQ+ ++RGV +V+ATPGRL+D L+K L C YLVLDEA
Sbjct: 154 GFPSLRTNLCI-GGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEA 212
Query: 446 DRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
DRM+DMGFE +R I + + PKK +N +
Sbjct: 213 DRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAK 253
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA 236
TGSGKTL + LP I+ Q P +R +GP +++ P+RELA
Sbjct: 93 TGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELA 136
Score = 35.1 bits (77), Expect = 1.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+K G PTPIQ QG P ++G++++G+
Sbjct: 62 LKKKGITHPTPIQVQGLPAVLTGRDMIGI 90
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
RQTL++SAT PK+++ A+ L + +N+G +A+ +++Q +VK K +
Sbjct: 235 RQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAG-AASLDVIQEVEYVKQEAKVV 288
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 463
R V GG QA +L +GVEI+I TPGR+ D LEK T L +C Y++LDEADRM+DM
Sbjct: 687 RTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCLEKAYTVLNQCNYVILDEADRMMDM 746
Query: 464 GFEPQIRKIIEQIRPTDRL 520
GFE + I+++I PT L
Sbjct: 747 GFEDSVHFILDKI-PTTNL 764
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELA 236
+TGSGKT A++LP + ++ PP+ DGP AL++AP+RELA
Sbjct: 626 ETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELA 670
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ + +K Y++PTPIQ Q PIA+ ++L+G+
Sbjct: 591 DLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGI 624
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/73 (50%), Positives = 51/73 (69%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+ + C++GG K Q L+ GV+IVI TPGR+ D +E G L +++VLDEADRMLD
Sbjct: 259 ISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLD 318
Query: 461 MGFEPQIRKIIEQ 499
MGFEP++R I+ Q
Sbjct: 319 MGFEPEVRAILSQ 331
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
+ + C++GG K Q L+ GV+IVI TPGR+ D +E G L ++++ D
Sbjct: 196 ISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/45 (46%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQL 642
RQT+M+SATWP V +LA++++ + I++ IGS L+ANH+++Q+
Sbjct: 336 RQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQI 380
Score = 40.7 bits (91), Expect = 0.032
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHIN---NQPPIRRGDGPIALVLAPTRELA 236
++F TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELA
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKG-VPRVLVLSPTRELA 180
Score = 34.7 bits (76), Expect = 2.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNLVGV 108
G++ P+PIQA WP + G++ +G+
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGI 135
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/72 (54%), Positives = 50/72 (69%)
Frame = +2
Query: 278 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
+ R V+GG + Q +L +G +IATPGRLIDFL++G + C +VLDEADRML
Sbjct: 218 FPRAVGVYGGQNRSRQIHELSKGCHFMIATPGRLIDFLDEGMLRMDHCHSVVLDEADRML 277
Query: 458 DMGFEPQIRKII 493
DMGFE QIRKI+
Sbjct: 278 DMGFEHQIRKIL 289
Score = 40.7 bits (91), Expect = 0.032
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 10/52 (19%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPP------IRRGD----GPIALVLAPTREL 233
+QTGSGKTLAY+LP + I N P + + D P ALVL PTREL
Sbjct: 151 SQTGSGKTLAYVLPIVNRILNSYPKLAMNTLAKSDLNIQCPSALVLVPTREL 202
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G + + + GG P EQ LE+GV+++IATPGRL+D E+G L C LV+DE
Sbjct: 95 YGKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDE 154
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDR 517
ADRMLDMGF P I I ++ PT R
Sbjct: 155 ADRMLDMGFIPDIETICTKL-PTSR 178
Score = 37.1 bits (82), Expect = 0.40
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
+RQTL++SAT P +KKLA+ +L + QI I S +AN I Q I V KK
Sbjct: 177 SRQTLLFSATMPPAIKKLADRFLSNPKQIEI-SRPATANTLIDQRLIEVSPRSKK 230
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ Q V +GY+EPTP+QA P + ++L+ V
Sbjct: 11 ELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAV 44
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT +++LP I + + R P +L+L PTRELA
Sbjct: 46 QTGTGKTASFVLPMIDILAHGR--CRARMPRSLILEPTRELA 85
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +2
Query: 272 TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 451
T V+ T ++GG +Q +DLE+GV+IV+ TPGR+ID L + T +L YLVLDEADR
Sbjct: 114 TKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADR 173
Query: 452 MLDMGFEPQIRKIIEQ 499
MLDMGF + +II++
Sbjct: 174 MLDMGFLDDVLEIIKR 189
Score = 32.7 bits (71), Expect = 8.6
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQIN 597
N++T ++SAT PKE+ +A ++ +YI ++
Sbjct: 193 NKRTFLFSATMPKEIVDIARKFMKEYIHVS 222
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/97 (42%), Positives = 56/97 (57%)
Frame = +2
Query: 203 CFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 382
C L + ++ S F + +R ++GG+ R Q +LERG +I +ATPGRL
Sbjct: 332 CLVLSPTRELAVQTYTESRKFNFGTGIRTVVLYGGSEVRRQLIELERGCDICVATPGRLT 391
Query: 383 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 493
D +E+ YLVLDEADRMLDMGF PQI+ I+
Sbjct: 392 DLVERRKIVFSCIKYLVLDEADRMLDMGFSPQIKSIL 428
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
RQT+M+SAT+PKE+++LA ++L DYI + +G + S N I Q ++ +K
Sbjct: 506 RQTVMFSATFPKEIQQLAREFLNDYIYLAVGRVG-STNEFIKQRLLYADQDQK 557
Score = 37.5 bits (83), Expect = 0.30
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVH-INNQPPIRRGDG---------PIALVLAPTRELA 236
QTGSGKT A++LP + + PP + G P+ LVL+PTRELA
Sbjct: 291 QTGSGKTAAFLLPIVTSMLRTGPPKQPSLGPLYNSRVALPVCLVLSPTRELA 342
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 83.8 bits (198), Expect = 4e-15
Identities = 40/77 (51%), Positives = 55/77 (71%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R+T V+GG Q + L RGVE+VIATPGRL+D +++ + NL + LVLDEADRMLD
Sbjct: 125 LRSTVVYGGVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLD 184
Query: 461 MGFEPQIRKIIEQIRPT 511
MGF P +++II + T
Sbjct: 185 MGFLPDLQRIINLLPKT 201
Score = 38.7 bits (86), Expect = 0.13
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
++Q+ + GY +PTPIQA+ P+ M+G +++G
Sbjct: 30 DIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMG 62
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G R T +FGG + Q R L+RGV + IATPGRL+D +++G +L + VLDE
Sbjct: 92 YGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDE 151
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
ADRMLDMGF P ++ I+ ++
Sbjct: 152 ADRMLDMGFMPALKTIVSKL 171
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT A+ LP + ++ P LVL+PTRELA
Sbjct: 41 QTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELA 82
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
+Q+ + T Y PTPIQ Q P + G +L+G
Sbjct: 7 IQEALATEKYHTPTPIQGQAIPHLLEGSDLIG 38
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
++ ++GG + Q +L++G +I++ATPGRL D LEKG L T+LVLDEADRMLD
Sbjct: 480 IKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLD 539
Query: 461 MGFEPQIRKII 493
MGF PQIR I+
Sbjct: 540 MGFSPQIRSIV 550
Score = 39.9 bits (89), Expect = 0.056
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
RQT+M+SAT+ KE++ LA++YL Y + +G + S N I Q +FV+ K
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFVEEENK 632
Score = 37.5 bits (83), Expect = 0.30
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 16/58 (27%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVH-INNQPP---------------IRRGDGPIALVLAPTRELA 236
QTGSGKT Y+LP I H + N PP R PI L+LAPTRELA
Sbjct: 407 QTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELA 464
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R + GG +QA L +GVEI+IATPGR+ D LEK T L +C+Y++LDEADRM+D
Sbjct: 251 IRTLSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSYVILDEADRMID 310
Query: 461 MGFEPQIRKIIEQIRP 508
+GF+ + I++QI P
Sbjct: 311 LGFQDSLNFILDQIPP 326
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELA 236
+TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA
Sbjct: 187 ETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELA 231
Score = 33.5 bits (73), Expect = 4.9
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ +GY++PTPIQ Q PI + ++++G+
Sbjct: 157 IRNIGYEKPTPIQMQCIPIGLKLRDMIGI 185
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/76 (50%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 VRNTCVFGGAPKRE-QARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
++ C++GG R+ Q +L R I++ATPGRL+DFL +G T L +YLV+DEADR+L
Sbjct: 201 LKTLCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLREGATTLANVSYLVIDEADRLL 260
Query: 458 DMGFEPQIRKIIEQIR 505
++GFE IR+I++QIR
Sbjct: 261 ELGFEDTIREIVQQIR 276
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELA 236
QTGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA
Sbjct: 139 QTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELA 185
Score = 41.9 bits (94), Expect = 0.014
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQ--L*IFVKNMKKKI 675
+RQT+ +SATWPK VK LA D+ I + IG L+ N NI Q + +F K+ +K+
Sbjct: 278 DRQTVFFSATWPKAVKDLAFDFCQYSPIYVQIGKSNLTINKNIDQEIICLFQKDKLQKL 336
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 83.8 bits (198), Expect = 4e-15
Identities = 38/75 (50%), Positives = 54/75 (72%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 472
CV+GG PK EQ L++ ++V+ATPGRL+D L++G+ +L + YLVLDEADRML+ GFE
Sbjct: 215 CVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFE 273
Query: 473 PQIRKIIEQIRPTDR 517
I+ II + + R
Sbjct: 274 EDIKNIIRETDASKR 288
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/45 (51%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL-QLSANHNILQL 642
RQTLM++ATWPKEV++LA ++ + I+++IG+ QL+AN I Q+
Sbjct: 288 RQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQI 332
Score = 40.3 bits (90), Expect = 0.043
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT A+ +PAI H+ N R G LV++PTRELA
Sbjct: 157 ETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELA 195
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGV 108
+ +PTPIQA WP +SGK++VGV
Sbjct: 132 FPKPTPIQAVAWPYLLSGKDVVGV 155
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 83.4 bits (197), Expect = 5e-15
Identities = 41/83 (49%), Positives = 55/83 (66%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
HT +R CV+GG Q LE G +I+IATPGRL+D L G N+ + LVLDEAD
Sbjct: 103 HTD-LRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDEAD 161
Query: 449 RMLDMGFEPQIRKIIEQIRPTDR 517
RMLDMGF P +++I+ ++ P D+
Sbjct: 162 RMLDMGFWPDLQRILRRL-PNDK 183
Score = 39.5 bits (88), Expect = 0.075
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ QTG+GKT A+ LP I + + +R P AL+L PTRELA
Sbjct: 45 KDLLAAAQTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELA 90
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 83.4 bits (197), Expect = 5e-15
Identities = 36/80 (45%), Positives = 56/80 (70%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G + + +T +FGG + Q L++G++I+IATPGRL+D + +G +L+ + VLDE
Sbjct: 178 YGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDE 237
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
ADRMLDMGF IRKI+ ++
Sbjct: 238 ADRMLDMGFIHDIRKILAEL 257
Score = 35.9 bits (79), Expect = 0.92
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
+ Q ++ GY+ PTPIQA+ P+ + G +L+G
Sbjct: 93 ILQAIEEEGYQTPTPIQAEAIPLILDGNDLLG 124
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT A+ +P + +N + +L++ PTRELA
Sbjct: 127 QTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELA 168
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + S ++ ++GG QA L G +++ATPGRL DF+++G N Q YL+LDE
Sbjct: 552 FSYNSSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQNLKYLILDE 611
Query: 443 ADRMLDMGFEPQIRKIIE 496
AD+M+DMGF PQI IIE
Sbjct: 612 ADKMIDMGFGPQIEHIIE 629
Score = 37.9 bits (84), Expect = 0.23
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQ--PPIRRG-DG---PIALVLAPTREL 233
QTGSGKT +++LP I ++ N+ I DG P+A +LAPTREL
Sbjct: 495 QTGSGKTASFLLPIITNLMNEGLDNIDSNIDGVALPLAAILAPTREL 541
Score = 37.9 bits (84), Expect = 0.23
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
R TLM+SAT+P +++ LA +L DY+ + +G + + ++ Q I V KK+
Sbjct: 639 RNTLMFSATFPDQIQHLAAQFLNDYLFLTVGRVGGTCT-DVTQSVIQVSGTKKR 691
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 83.4 bits (197), Expect = 5e-15
Identities = 34/77 (44%), Positives = 52/77 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + ++ V+GG R Q+ ++ G I++ TPGRLIDF+ +G N C +LVLDE
Sbjct: 404 FSYDTIIKPVVVYGGVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVLDE 463
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGF +++K++
Sbjct: 464 ADRMLDMGFMGEVKKVV 480
Score = 39.9 bits (89), Expect = 0.056
Identities = 16/33 (48%), Positives = 27/33 (81%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 609
R TLM+SAT+P EV++LA ++L +YI + +G++
Sbjct: 491 RNTLMFSATFPNEVQELAAEFLENYIFVTVGTV 523
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTRELA 236
QTGSGKT AY++P I + + P A+V+ PTRELA
Sbjct: 349 QTGSGKTGAYLIPIINRLIEEGCAASSYDETQTPEAVVMCPTRELA 394
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + VR V+GG Q R++ +G IV TPGRL+D +++G L + YLVLDE
Sbjct: 378 FAYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRLLDVIQRGWIGLTKLRYLVLDE 437
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGFEP +R+++
Sbjct: 438 ADRMLDMGFEPDMRRLV 454
Score = 40.3 bits (90), Expect = 0.043
Identities = 17/33 (51%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYL-GDYIQINIG 603
NRQTL++SAT+P++++KLA D+L DY+ + +G
Sbjct: 464 NRQTLLFSATYPQDIQKLAADFLKTDYLFLAVG 496
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/89 (46%), Positives = 58/89 (65%)
Frame = +2
Query: 251 SSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 430
S AD + + + VFGG R Q + L RGV+I++ATPGRL+D +E+ +L+ +L
Sbjct: 96 SIADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHL 155
Query: 431 VLDEADRMLDMGFEPQIRKIIEQIRPTDR 517
+LDEADRMLDMGF + KI+ + P DR
Sbjct: 156 ILDEADRMLDMGFVRDVMKIVGKC-PDDR 183
Score = 36.7 bits (81), Expect = 0.53
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT A+ LP + H + +P R AL+L+PTRELA
Sbjct: 49 QTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELA 90
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 83.0 bits (196), Expect = 6e-15
Identities = 38/85 (44%), Positives = 56/85 (65%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G +R+ ++GG + Q + L+RG I++ATPGRL+D + +G L + VLDE
Sbjct: 98 YGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDE 157
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDR 517
ADRMLDMGF P +++II Q+ PT R
Sbjct: 158 ADRMLDMGFLPDLKRIITQL-PTQR 181
Score = 39.9 bits (89), Expect = 0.056
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT A LP + + P+ALVLAPTRELA
Sbjct: 47 QTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELA 88
Score = 34.7 bits (76), Expect = 2.1
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
VQ+ + YK PTPIQAQ P A+ G++++G
Sbjct: 13 VQKALVEENYKIPTPIQAQTIPAALEGRDVLG 44
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 83.0 bits (196), Expect = 6e-15
Identities = 39/88 (44%), Positives = 59/88 (67%)
Frame = +2
Query: 299 FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 478
+GG + +QA+ ++R +I++A PGRL DFL++G +L + TYLV+DEADR+LDMGFE
Sbjct: 212 YGGQNRDQQAQQIKRNPDILVACPGRLKDFLQEGILDLSKVTYLVIDEADRLLDMGFEDD 271
Query: 479 IRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
+R I+++ R + PK RNL
Sbjct: 272 VRFIVQRTRQDRQTVFFSATWPKAVRNL 299
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQL*IFVKNMKK 669
+RQT+ +SATWPK V+ L+ D+ D I + +G L+ N NI Q I + N +K
Sbjct: 282 DRQTVFFSATWPKAVRNLSLDFCAEDPIYVQVGRSNLTVNKNIDQEIICLYNNQK 336
Score = 41.1 bits (92), Expect = 0.024
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI---NNQPPIR-RGDGPIALVLAPTREL 233
+TGSGKT Y+LP ++ I N R R +GP L+LAPTREL
Sbjct: 145 ETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTREL 189
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++Q + + ++ PTPIQ+ +P+ +SG +L+GV
Sbjct: 110 QIQNVIDGLNFRAPTPIQSVVFPLILSGYDLIGV 143
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 82.6 bits (195), Expect = 8e-15
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F VR T +FGG + Q + LE GV+I++A PGRL+D +E+G +L + LVLDE
Sbjct: 103 FSRHQPVRVTTIFGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDE 162
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDR 517
AD+MLDMGF I +I+ + P DR
Sbjct: 163 ADQMLDMGFAKPIERIVATL-PEDR 186
Score = 37.5 bits (83), Expect = 0.30
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
QTG+GKT ++ LP + + P +G LVLAPTREL
Sbjct: 52 QTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTREL 92
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNLVGV 108
GY +PTPIQAQ P+ + G++L+G+
Sbjct: 26 GYVKPTPIQAQSIPLLLEGRDLLGL 50
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 82.6 bits (195), Expect = 8e-15
Identities = 37/82 (45%), Positives = 57/82 (69%)
Frame = +2
Query: 251 SSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 430
++ ++G +R V+GG P Q + L+RG +I++ATPGRL+D L + +L++ YL
Sbjct: 95 NTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYL 154
Query: 431 VLDEADRMLDMGFEPQIRKIIE 496
VLDEADRMLD+GF I+KI++
Sbjct: 155 VLDEADRMLDLGFIDPIQKIMD 176
Score = 39.5 bits (88), Expect = 0.075
Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELA 236
QTG+GKT ++ LP I ++ P G P+ ALVLAPTRELA
Sbjct: 49 QTGTGKTASFALPIIEKLSKNP--IDGYRPVRALVLAPTRELA 89
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
E+Q +K +GY++PTPIQ+Q P+ + G +L+
Sbjct: 14 ELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLL 45
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 82.6 bits (195), Expect = 8e-15
Identities = 37/80 (46%), Positives = 56/80 (70%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
VR+ C++GGAP +Q L++ +IV+ATPGRL+D +++ T L + +VLDEADRMLD
Sbjct: 110 VRSVCLYGGAPIEKQITTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLD 169
Query: 461 MGFEPQIRKIIEQIRPTDRL 520
MGF + +I++QI+ L
Sbjct: 170 MGFIHDVTRILDQIKSRKNL 189
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +3
Query: 87 WKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
WK+ + TG+GKT A+ +P + HI+ + D ALVLAPTRELA
Sbjct: 49 WKDVIAKAPTGTGKTFAFGIPMVEHIDPE-----SDAVQALVLAPTRELA 93
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/80 (47%), Positives = 55/80 (68%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG + T GGAP R+Q RDL +GV+I++ATPGRL D +++ L +LVLDE
Sbjct: 199 FGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLVLDE 258
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
AD+MLD+GF P +++II ++
Sbjct: 259 ADQMLDIGFLPAVKRIISKV 278
Score = 41.9 bits (94), Expect = 0.014
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ QTG+GKT A+ LP I + P +G A++L+PTRELA
Sbjct: 141 KDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELA 189
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINI 600
+RQTL++SAT KE+KKL E YL D +Q+++
Sbjct: 281 DRQTLLFSATMSKEIKKLTETYLTDPVQVSV 311
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ + + +GY PTPIQ+Q P ++ K+LVG+
Sbjct: 113 EIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGL 146
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Frame = +2
Query: 257 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEK--GTT---NLQRC 421
A F + R+ ++GGA K +Q R L G ++V+ATPGRL DFLE G T + +
Sbjct: 193 AKFCPAAGCRSAVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEPPPGFTAPVSAVKA 252
Query: 422 TYLVLDEADRMLDMGFEPQIRKIIE 496
Y+VLDEADRMLDMGFEPQI+KI +
Sbjct: 253 AYVVLDEADRMLDMGFEPQIKKIFK 277
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+++ +K GY PTPIQA+ WPI + GK++V + K
Sbjct: 97 LRKALKAQGYDAPTPIQAEAWPILLKGKDVVAIAK 131
Score = 41.9 bits (94), Expect = 0.014
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGD--YIQINIGSLQLSANHNILQ 639
RQT+M++ATWPK V+K+A+ + +IQI G +L+AN +I Q
Sbjct: 283 RQTVMFTATWPKGVQKIADAFTTKPIHIQIGSGGDKLTANKSITQ 327
Score = 34.3 bits (75), Expect = 2.8
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 13/55 (23%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLAPTRELA 236
+TGSGKT ++LPA+ I P ++ DG P +VLAPTRELA
Sbjct: 131 KTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRELA 185
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 82.2 bits (194), Expect = 1e-14
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 463
++ C+ GG Q R ++ G ++IATPGR ID L N+++ +YLV+DEADRM D+
Sbjct: 203 KSACLVGGNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDL 262
Query: 464 GFEPQIRKIIEQIR 505
GFEPQ+ +I E++R
Sbjct: 263 GFEPQVIRIAERMR 276
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA
Sbjct: 147 TGSGKTLAFIIPCLLHVLAQPPTGQYEA-AAVILSPTRELA 186
Score = 36.3 bits (80), Expect = 0.70
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
+RQTLM+SAT+P V+++A L + I+I +G L+ NI Q I V N K N
Sbjct: 278 DRQTLMFSATFPHTVERIARKLLQNSIEIVVG-LRNVVTPNINQS-ILVTNEDNKFN 332
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 81.8 bits (193), Expect = 1e-14
Identities = 52/128 (40%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Frame = +2
Query: 146 ASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASSADFG----HTSYVR-NTCVFGGA 310
A +CAH+ W+ FG G ++ + SA S H ++R C G +
Sbjct: 173 ACYCAHQPSALLGAWRWTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTS 232
Query: 311 P--KREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 484
E+ DL R PG D L+RCTYLVLDEADRMLDMGFEPQIR
Sbjct: 233 NPGSGERCGDLHRHARASHRLPGGRED-------QLRRCTYLVLDEADRMLDMGFEPQIR 285
Query: 485 KIIEQIRP 508
KI++QIRP
Sbjct: 286 KIVDQIRP 293
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/24 (66%), Positives = 24/24 (100%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGV 108
+KEPTPIQAQG+P+A+SG+++VG+
Sbjct: 106 FKEPTPIQAQGFPLALSGRDMVGI 129
Score = 38.3 bits (85), Expect = 0.17
Identities = 28/87 (32%), Positives = 40/87 (45%)
Frame = +1
Query: 289 HVCVWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGYGI 468
H+ V C+ ++PG GE + H ++R + G +QL + G
Sbjct: 221 HLRVRRCAEGTSNPGSGERCGDLHRHARASHRLPGGREDQLRRCTYLVLDEADRMLDMGF 280
Query: 469 *TTNQKNH*ANTPNRQTLMWSATWPKE 549
+K P+RQTLMWSATWPKE
Sbjct: 281 EPQIRKIVDQIRPDRQTLMWSATWPKE 307
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R GG +R Q RD+ G IV+ATPGRL DF+ +G NL L+LDE+DRMLD
Sbjct: 101 IRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLD 160
Query: 461 MGFEPQIRKIIEQIRPTDR 517
MGF P I++II + P +R
Sbjct: 161 MGFLPTIKRIIAAM-PAER 178
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ QTG+GKTLA++LP I ++ +P R G AL+L PTRELA
Sbjct: 40 KDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVRALILTPTRELA 85
Score = 33.5 bits (73), Expect = 4.9
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +1
Query: 385 FLGKGHNQLTAVHIFSS**G*SYVGYGI*TTNQKNH*ANTPNRQTLMWSATWPKEVKKLA 564
F+ +G LT V + + G T ++ A RQTL++SAT VK+L
Sbjct: 136 FMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLLFSATLESSVKQLV 195
Query: 565 EDYLGDYIQINIGSL 609
E ++ + ++I +GS+
Sbjct: 196 ETHVRNAVRIELGSI 210
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = +2
Query: 257 ADFGHTSYVRNTCVFGGAPKREQARDLERG--VEIVIATPGRLIDFLEKGTTNLQRCTYL 430
A G + + C++GG K+EQ R L + V IV+ TPGR++D G+ +L TYL
Sbjct: 260 AKLGKSMGIGMICLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYL 319
Query: 431 VLDEADRMLDMGFEPQIRKII 493
VLDEADRMLD GFEP IR II
Sbjct: 320 VLDEADRMLDKGFEPDIRAII 340
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 639
R T M+SATWP V+ LAE ++ +++ +GS +LSAN + Q
Sbjct: 350 RHTSMFSATWPPAVRGLAESFMNGPVRVTVGSDELSANRRVEQ 392
Score = 36.7 bits (81), Expect = 0.53
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
V++ + + G+ PTPIQA WP+ + K++VG+
Sbjct: 170 VKKTLDSQGFSTPTPIQACCWPVLLQNKDVVGI 202
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 7/49 (14%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELA 236
+TGSGKT A+ LPA+ H+ + + +G LV+APTRELA
Sbjct: 204 ETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELA 252
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
FG +++ C+FGG K QAR+L ++ +V+ TPGR +D + G +L +YLVLD
Sbjct: 277 FGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGELDLSSVSYLVLD 336
Query: 440 EADRMLDMGFEPQIRKII 493
EADRMLD GFE IR+II
Sbjct: 337 EADRMLDAGFENDIRRII 354
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
RQT+M+SATWP+ V++LA +L + ++I +GS +LSAN I Q+ + N + K
Sbjct: 364 RQTVMFSATWPESVRRLASTFLNNPLRITVGSDELSANKRIEQIVEVLDNPRDK 417
Score = 40.7 bits (91), Expect = 0.032
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 8/50 (16%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPI-----ALVLAPTRELA 236
+TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRELA
Sbjct: 218 ETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELA 267
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGV 108
+++PTPIQA WP +S K++VG+
Sbjct: 193 FEKPTPIQACSWPALLSKKDVVGI 216
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +2
Query: 248 ASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 427
+S + + S V + V+GG EQ R L G I++ATPGRL+D L K +L + T+
Sbjct: 101 SSIEQYAYGSSVTSVMVYGGVSIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTH 160
Query: 428 LVLDEADRMLDMGFEPQIRKIIEQIRPT 511
LV DEADRMLDMGF+ +I ++++++ T
Sbjct: 161 LVFDEADRMLDMGFKDEIVEVLKRLPST 188
Score = 33.9 bits (74), Expect = 3.7
Identities = 25/51 (49%), Positives = 30/51 (58%), Gaps = 9/51 (17%)
Frame = +3
Query: 111 QTGSGKTLAYILP----AIVHINN---QPPIRR-GDGPI-ALVLAPTRELA 236
QTG+GKT A+ LP + H +N QP + PI ALVL PTRELA
Sbjct: 46 QTGTGKTAAFALPLLHQLLTHQDNLAAQPDTQHINSTPITALVLVPTRELA 96
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GG REQ L++G +IVIATPGRL DFLE+ +L+ +VLDEAD+MLDMGFEP
Sbjct: 81 VYGGEGAREQRGLLKKGCDIVIATPGRLKDFLERRCLSLKYVRVMVLDEADKMLDMGFEP 140
Query: 476 QIRKII 493
QIR ++
Sbjct: 141 QIRDLV 146
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 609
NRQTLM+SAT+ V+ +A+ YL + +I++G +
Sbjct: 159 NRQTLMFSATFGTGVQAMAKRYLHNEARIHVGQI 192
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 81.4 bits (192), Expect = 2e-14
Identities = 32/70 (45%), Positives = 55/70 (78%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GG+P+ Q +++++GV+IV+ PGR++DF+E+G N+ + + L LDEAD+ML+MGF+
Sbjct: 174 VYGGSPEYPQIQEIKKGVDIVVGCPGRVLDFIERGILNVSKISVLTLDEADKMLEMGFKE 233
Query: 476 QIRKIIEQIR 505
+ KII+ +R
Sbjct: 234 TVDKIIDCVR 243
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 24 KDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQ---PPIRRGD 194
+ G++R + Y K+ + +TG+GKTLA++LP I + + P + G
Sbjct: 80 RSRGIERLFPIQAQSFESIYGKKDVLGKAKTGTGKTLAFVLPVIERLLKKGKFDPNKHGR 139
Query: 195 GPIALVLAPTRELA 236
P+ LVL PTRELA
Sbjct: 140 RPLVLVLLPTRELA 153
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R + GG +QA L G EIVIATPGRL D +E+ L +CTY+V+DEAD+M+D
Sbjct: 372 LRCVSIVGGRDMNDQAYALRDGAEIVIATPGRLKDCIERHVLVLSQCTYVVMDEADKMVD 431
Query: 461 MGFEPQIRKIIEQI 502
MGFEPQ+ I++ +
Sbjct: 432 MGFEPQVNFILDSL 445
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELA 236
+TGSGKT ++++P + +I+ P + + GP AL+L PTRELA
Sbjct: 312 ETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELA 356
Score = 37.9 bits (84), Expect = 0.23
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ +GYKEP+PIQ Q PI + ++L+G+
Sbjct: 282 IEEVGYKEPSPIQRQAIPIGLQNRDLIGI 310
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/96 (42%), Positives = 53/96 (55%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R+ GG P E + RGV IV+ATPGRL+D L+K L C YL +DEADRM+D
Sbjct: 288 IRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMID 347
Query: 461 MGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
MGFE +R I + + PKK +N R
Sbjct: 348 MGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFAR 383
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAXXXXXXXXXXDTHL 278
TGSGKTL ++LP I+ Q P R +GP L++ P+RELA HL
Sbjct: 223 TGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHL 280
Score = 39.1 bits (87), Expect = 0.099
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+ G+ G K PTPIQ QG P ++G++L+G+
Sbjct: 188 ILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGI 220
Score = 35.9 bits (79), Expect = 0.92
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
RQTL++SAT PK+++ A L + IN+G +A+ N+ Q +VK K +
Sbjct: 365 RQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVTQQVEYVKQEAKVV 418
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/82 (46%), Positives = 52/82 (63%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G +R VFGG Q L+ GVEI++ATPGRL+D +E+ N + LVLDE
Sbjct: 104 YGKYLALRTAVVFGGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDE 163
Query: 443 ADRMLDMGFEPQIRKIIEQIRP 508
ADRMLDMGF P I++++ + P
Sbjct: 164 ADRMLDMGFLPDIKRVMALLSP 185
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/52 (36%), Positives = 34/52 (65%)
Frame = +1
Query: 502 TPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVK 657
+P RQ+LM+SAT+ E++KLA+ L ++I ++Q + N +I + +VK
Sbjct: 184 SPQRQSLMFSATFSGEIRKLADSLLKQPVRIE-AAVQNTVNESISHVIHWVK 234
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHIN--NQPPIRRGDGPI-ALVLAPTRELA 236
K+ QTG+GKT + LP + + + P+ AL++APTRELA
Sbjct: 43 KDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELA 94
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 81.0 bits (191), Expect = 2e-14
Identities = 36/87 (41%), Positives = 58/87 (66%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
+ G ++ ++G +P Q +L++ IV+ TPGR++D +EKGT +L+R YLV+D
Sbjct: 94 NIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVID 153
Query: 440 EADRMLDMGFEPQIRKIIEQIRPTDRL 520
EAD ML+MGF Q+ II+++ PT R+
Sbjct: 154 EADEMLNMGFIDQVEAIIDEL-PTKRM 179
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ ++QTGSGKT ++ +P + + + P ALVL PTRELA
Sbjct: 42 KDLVVKSQTGSGKTASFGIPLCEMVEWEE-----NKPQALVLTPTRELA 85
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGT---TNLQRCTYL 430
F + S + C +GG P +Q ++RG + I+ AT GRLID L+ + + +R TY+
Sbjct: 605 FLNASGITIKCAYGGQPISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVLSFRRITYV 664
Query: 431 VLDEADRMLDMGFEPQIRKIIEQIRP 508
VLDEADRM DMGFEPQ+ KI+ IRP
Sbjct: 665 VLDEADRMFDMGFEPQVMKILASIRP 690
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/42 (59%), Positives = 34/42 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA+ +P I H+ +Q P++ DGPI L+LAPTREL+
Sbjct: 554 KTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELS 595
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 31 MGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+GY PT IQAQ PIA SG++L+GV K
Sbjct: 527 VGYARPTAIQAQAIPIAESGRDLIGVAK 554
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 80.2 bits (189), Expect = 4e-14
Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +2
Query: 266 GHTSYVRNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
G + V V+GGA +Q L+RG +IV+ATPGRLIDF K N C LV+DE
Sbjct: 192 GRYTGVNADAVYGGAEYEKQMELLKRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDE 251
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGF P +R+I+
Sbjct: 252 ADRMLDMGFIPDVRRIV 268
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/71 (49%), Positives = 51/71 (71%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GGAP +Q + L+R +V+ATPGRLID L +G +L YLVLDEAD M++MGF+
Sbjct: 4 VYGGAPIDDQIQKLKRATHVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKA 63
Query: 476 QIRKIIEQIRP 508
+I +I++ +P
Sbjct: 64 EIDEILKSCKP 74
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
VFGG +Q R LE+ V++VI TPGR+ID+ G+ L + LV+DEADRMLDMGF P
Sbjct: 233 VFGGMDHEKQRRSLEQPVDLVIGTPGRIIDYSRGGSLKLSKVEVLVIDEADRMLDMGFIP 292
Query: 476 QIRKIIEQI 502
+++I+ Q+
Sbjct: 293 DVKRIVSQL 301
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELA 236
++ + + QTG+GKT A++L + N P R G P ALVLAPTRELA
Sbjct: 163 RDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELA 212
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+ ++GGAP +Q R L++GV++V+ATPGR I F+E G L YLVLDEAD ML+
Sbjct: 100 ITTVTLYGGAPIMDQKRALKKGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLN 159
Query: 461 MGFEPQIRKIIEQIRPTDR 517
MGF + K++ + P DR
Sbjct: 160 MGFVEDVEKVL-KASPDDR 177
Score = 37.9 bits (84), Expect = 0.23
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ QTG+GKT A+ LP + I +P +++ P AL+L PTRELA
Sbjct: 46 QAQTGTGKTAAFGLPIVQKI--EPGLKK---PQALILCPTRELA 84
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 496 ANTPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 606
A+ +R LM+SAT P +KK+AE Y+ + I I S
Sbjct: 172 ASPDDRTVLMFSATMPPRLKKIAESYMHNSITIKAKS 208
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F H+S + +GGA Q + + G I++ATPGRL+DFLEKG YLVLDE
Sbjct: 361 FSHSSVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGRLLDFLEKGKIVFSSLKYLVLDE 420
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGF I+ +I
Sbjct: 421 ADRMLDMGFLSSIKTVI 437
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +1
Query: 487 NH*ANTPN--RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKN 660
NH TP R TLM+SAT+P E+++LA +L +Y+ + +G++ +AN ++ Q + V
Sbjct: 438 NHKTMTPTAERITLMFSATFPHEIQELASAFLNNYLFVVVGTVG-AANTDVKQEVLCVPK 496
Query: 661 MKKK 672
+KK
Sbjct: 497 FEKK 500
Score = 39.5 bits (88), Expect = 0.075
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI--NNQP--PIRRGDGPIALVLAPTRELA 236
QTGSGKT A++LP + +I NN P P LV+ PTRELA
Sbjct: 306 QTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELA 351
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 463
R V GG EQ+ + +G IV+ATPGRL+D LE+ L +CTY+V+DEADRMLDM
Sbjct: 355 RCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDM 414
Query: 464 GFEPQIRKIIEQI 502
GFE + KI+ +
Sbjct: 415 GFEDDVNKILSSL 427
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELA 236
+TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELA
Sbjct: 294 ETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELA 338
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 496 ANTPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 609
+++ RQT+M+SAT P V LA+ YL + + + IG++
Sbjct: 445 SSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNI 482
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 79.8 bits (188), Expect = 6e-14
Identities = 37/80 (46%), Positives = 51/80 (63%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G + +T GG P Q R L +GVE+++ATPGRL+D ++ L +LVLDE
Sbjct: 112 YGRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDE 171
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
ADRMLDMGF IRKI+ ++
Sbjct: 172 ADRMLDMGFINDIRKIVAKL 191
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+ + + Y PTPIQAQ P A++G+++VG+
Sbjct: 27 IARALSEENYVTPTPIQAQTIPTALTGRDVVGI 59
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSA---NHNILQL 642
RQTL +SAT PK++ +LA+ L D ++ + + +A N ILQ+
Sbjct: 195 RQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRILQV 241
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 79.8 bits (188), Expect = 6e-14
Identities = 40/78 (51%), Positives = 51/78 (65%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 463
R C+ GGAP Q + L + V++V+ATPGRLID LE+G + R LVLDEADRMLDM
Sbjct: 104 RTACLVGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDM 163
Query: 464 GFEPQIRKIIEQIRPTDR 517
GF I+ I + P +R
Sbjct: 164 GFVDDIKAIAARC-PAER 180
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ TGSGKT A++LP+I + +P + + GP LVL PTRELA
Sbjct: 45 SHTGSGKTAAFLLPSIQRLLAEPAV-KSIGPRVLVLTPTRELA 86
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 79.8 bits (188), Expect = 6e-14
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = +2
Query: 266 GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 445
G + +R+ ++GG + Q + L RGVEI + PGRL+D LE+GT L+ L+LDEA
Sbjct: 94 GKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEA 153
Query: 446 DRMLDMGFEPQIRKIIEQIRPTDR 517
D+M DMGF P +R+I+ ++ P R
Sbjct: 154 DQMFDMGFLPDVRRIL-RLAPAQR 176
Score = 37.9 bits (84), Expect = 0.23
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ G++ +GY PTPIQ Q P A+ G++++G+
Sbjct: 11 QITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGI 44
Score = 34.3 bits (75), Expect = 2.8
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT A++LP + + P RG A+++ PTRELA
Sbjct: 46 QTGTGKTAAFVLPILQRLMRGP---RG-RVRAMIVTPTRELA 83
>UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_79919_77949 - Giardia lamblia
ATCC 50803
Length = 656
Score = 79.8 bits (188), Expect = 6e-14
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 299 FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 478
+GG P Q L+ G +I++ATPGRL+DF+++G ++V DE DRMLDMGFEPQ
Sbjct: 255 YGGDPSGPQRDALQMGCDILVATPGRLLDFIKQGVVETTYVRFVVFDECDRMLDMGFEPQ 314
Query: 479 IRKIIEQIRP 508
IR I+ ++ P
Sbjct: 315 IRDILHELPP 324
Score = 41.5 bits (93), Expect = 0.019
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGD--YIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
RQTL++SAT+PKE+K LA ++L + I +G + S+N N+ Q + V+ K+
Sbjct: 343 RQTLLFSATFPKEIKNLAMEFLRQDRLVSITVGQIG-SSNPNLAQRVVLVERSNDKL 398
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG + + GG E + GV IV+ATPGRLID LE+G NL C + +DE
Sbjct: 260 FGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFFTMDE 319
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDRL 520
AD+M+DMGFE ++ I+ + +++L
Sbjct: 320 ADKMIDMGFEKSLQSILNYLPASEKL 345
Score = 38.3 bits (85), Expect = 0.17
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+K +GY PTPIQ P+A++G+++VG+
Sbjct: 170 IKNLGYDSPTPIQRASIPLALNGRDIVGI 198
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINN---------QPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LP +I + + P+ L+LAPTRELA
Sbjct: 200 ETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELA 250
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 79.4 bits (187), Expect = 8e-14
Identities = 41/89 (46%), Positives = 57/89 (64%)
Frame = +2
Query: 251 SSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 430
S +F +R ++GG Q R LER ++V+ATPGRL+D +E+GT +L L
Sbjct: 88 SLKEFSRHKQLRVAPIYGGVAINPQIRQLERA-DVVVATPGRLLDHIERGTIDLGDVEIL 146
Query: 431 VLDEADRMLDMGFEPQIRKIIEQIRPTDR 517
VLDEADRMLDMGF + +II++ P+DR
Sbjct: 147 VLDEADRMLDMGFIDDVEEIIDEC-PSDR 174
Score = 33.9 bits (74), Expect = 3.7
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
TGSGKTLA+ I I +G+G ALVL PTRELA
Sbjct: 48 TGSGKTLAFGCGII------QKIEKGNGIRALVLTPTRELA 82
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 79.4 bits (187), Expect = 8e-14
Identities = 32/69 (46%), Positives = 51/69 (73%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V GG +EQA ++ G E+++ATPGRL+D +++ L +C Y+V+DEADRM+DMGFE
Sbjct: 273 VVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEE 332
Query: 476 QIRKIIEQI 502
Q++K++ +
Sbjct: 333 QVQKVLASL 341
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELA 236
+TGSGKT ++++P I +I P + + +GP L+LAPTRELA
Sbjct: 208 ETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELA 252
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
V+ + MGYKEPTPIQ PIA+ ++++GV
Sbjct: 174 VRDTISRMGYKEPTPIQRAAIPIALGIRDVIGV 206
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
RQT+M++AT P ++KLA+ YL + IGS A + QL F+ +K+
Sbjct: 365 RQTMMYTATMPVAIEKLAKKYLRRPGIVTIGSAG-QAGSTVTQLVEFLNTDEKR 417
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/100 (41%), Positives = 52/100 (52%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
H +R GG P E + RGV I++ATPGRL+D L+K L C YL +DEAD
Sbjct: 286 HCPEIRCCLAIGGVPVSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEAD 345
Query: 449 RMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
RM+DMGFE +R I + PKK +N R
Sbjct: 346 RMIDMGFEEDVRTIFSFFEGQRQTLLFSATMPKKIQNFAR 385
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA 236
TGSGKTL ++LP I+ Q P R +GP L++ P+RELA
Sbjct: 225 TGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELA 268
Score = 37.1 bits (82), Expect = 0.40
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1
Query: 19 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
G++ G +PTPIQ QG P +SG++++G+
Sbjct: 193 GLEQKGITKPTPIQVQGIPAVLSGRDIIGI 222
Score = 36.3 bits (80), Expect = 0.70
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
RQTL++SAT PK+++ A L + IN+G +A+ N++Q +VK K
Sbjct: 367 RQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVIQEVEYVKQEAK 418
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 463
R+ V GG QA +L +G EI+I TPGR+ D L++ T L +C Y++LDEADRM+DM
Sbjct: 445 RSVAVVGGRNAESQAFELRKGCEIIIGTPGRVKDCLDRAYTVLSQCNYVILDEADRMIDM 504
Query: 464 GFEPQIRKIIEQIRPTD 514
GFE ++ I++ I T+
Sbjct: 505 GFEDVLKYILDCIPSTN 521
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELA 236
TGSGKT A++LP + ++ PP+ DGP AL+LAP+RELA
Sbjct: 385 TGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELA 428
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ + +K GY +PTPIQ Q PIA+ ++L+G+
Sbjct: 349 ELLEAIKKAGYIKPTPIQMQAIPIALEMRDLIGI 382
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F S ++ +GG Q L G I++ATPGRL+DF+EKG +LVLDE
Sbjct: 296 FSLNSILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDE 355
Query: 443 ADRMLDMGFEPQIRKIIE 496
ADRMLDMGF P I K+++
Sbjct: 356 ADRMLDMGFLPSIEKMVD 373
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 1 RHEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
R+ V +K GYK+PTP+Q PI M+G++L+
Sbjct: 204 RNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLM 237
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
RQTLM+SAT+P EV+ LA +L +Y+ + +G
Sbjct: 383 RQTLMFSATFPDEVQHLARRFLNNYLFLAVG 413
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 79.0 bits (186), Expect = 1e-13
Identities = 39/96 (40%), Positives = 54/96 (56%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R GG R Q +++GV IV+ATPGRL D L K NL C YL LDEADR++D
Sbjct: 293 IRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD 352
Query: 461 MGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNLLR 568
+GFE IR++ + + + PKK +N +
Sbjct: 353 LGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAK 388
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA 236
TGSGKTL ++LP I+ + PI G+GP +++ P+RELA
Sbjct: 228 TGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELA 271
Score = 37.1 bits (82), Expect = 0.40
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ G +PTPIQ QG P+ +SG++++G+
Sbjct: 197 LREKGIVQPTPIQVQGLPVVLSGRDMIGI 225
Score = 34.3 bits (75), Expect = 2.8
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVK 657
RQTL++SAT PK+++ A+ L + +N+G +AN +++Q +VK
Sbjct: 370 RQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAG-AANLDVIQEVEYVK 417
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/86 (44%), Positives = 57/86 (66%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
+ G ++ T VFG + +Q +L++ IV+ TPGR++D +EKGT L R +YLV+D
Sbjct: 92 NIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVID 151
Query: 440 EADRMLDMGFEPQIRKIIEQIRPTDR 517
EAD ML+MGF Q+ II+ + PT+R
Sbjct: 152 EADEMLNMGFIEQVEAIIKHL-PTER 176
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ ++QTGSGKT ++ +P + + N + P AL+L PTRELA
Sbjct: 40 KDLVVKSQTGSGKTASFGIP-LCELANWDENK----PQALILTPTRELA 83
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/87 (45%), Positives = 51/87 (58%)
Frame = +2
Query: 257 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 436
A F S +R ++GG Q L+RGV IV+ TPGR+ID LE+G L + + VL
Sbjct: 92 AQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVL 151
Query: 437 DEADRMLDMGFEPQIRKIIEQIRPTDR 517
DEAD ML MGF + KI+ Q P DR
Sbjct: 152 DEADEMLSMGFIDDVEKILSQ-APQDR 177
Score = 34.3 bits (75), Expect = 2.8
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
++QTG+GKT A+ LP + ++ Q + A+VL PTRELA
Sbjct: 46 QSQTGTGKTAAFSLPILERLDPQQKAVQ-----AIVLTPTRELA 84
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 245 SASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 424
S S +G +R+ VFGG P Q + L GV++++ATPGRL+D +++ +
Sbjct: 90 SESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLE 149
Query: 425 YLVLDEADRMLDMGFEPQIRKII 493
LVLDEADRMLDMGF I+KI+
Sbjct: 150 ILVLDEADRMLDMGFIRDIKKIL 172
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
+Q+ V GY P+PIQAQ P ++GK+++
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVM 42
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ QTG+GKT + LP + ++ + G ALVL PTRELA
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQ-IRALVLTPTRELA 86
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Frame = +2
Query: 227 RVSTTNSASSADFGHTSYVRNTC--VFGGAPKREQARDLERGVEIVIATPGRLIDFLE-K 397
R T A+ A+ + + V C +FGGA K EQ + L G EIV+ATPGRLID L K
Sbjct: 186 RELATQIANEANAFNRAGVPARCCAIFGGASKHEQLKRLRAGAEIVVATPGRLIDVLHVK 245
Query: 398 GTTNLQRCTYLVLDEADRMLDMG 466
+ +L+R TYL LDEADRMLDMG
Sbjct: 246 NSIDLRRVTYLALDEADRMLDMG 268
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
TGSGKTLA++LPA I+ Q P+R+ +GP+ALVLAPTRELA
Sbjct: 149 TGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELA 189
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/86 (44%), Positives = 58/86 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + VR ++GG Q L+RG EI++ATPGRLID +++G+ ++ R T+LVLDE
Sbjct: 92 FAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVATPGRLIDHIKRGSISIDRVTHLVLDE 151
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDRL 520
AD MLDMGF I+ I++ + P +++
Sbjct: 152 ADTMLDMGFIDDIQFILD-LTPDEKV 176
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/97 (40%), Positives = 56/97 (57%)
Frame = +2
Query: 203 CFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 382
C L + ++ S + G +++ CV+GG+ K Q + GV+IVI TPGRL
Sbjct: 194 CLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLR 253
Query: 383 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 493
D +E L +++VLDEADRMLDMGFE +R I+
Sbjct: 254 DLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFIL 290
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/45 (46%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLG-DYIQINIGSLQLSANHNILQL 642
RQ +M+SATWP +V KLA++++ + I++ IGS+ L+ANH+++Q+
Sbjct: 297 RQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQI 341
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELA 236
+TGSGKTLA+ +PAI+H+ I G P LVL+PTRELA
Sbjct: 159 KTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELA 204
Score = 34.7 bits (76), Expect = 2.1
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGVLK 114
+++P+PIQ+ WP + G++L+G+ K
Sbjct: 134 FEKPSPIQSHTWPFLLDGRDLIGIAK 159
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = +2
Query: 320 EQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 499
+QA L +G EIVIATPGRL+D LE+ L +C YLVLDEADRM+DM FEPQ+ ++++
Sbjct: 328 KQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLD- 386
Query: 500 IRPTDRL 520
+ P L
Sbjct: 387 VMPCSNL 393
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 3/44 (6%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELA 236
TGSGKT A++LP + +I+ PP+R + +GP ALV+ PTRELA
Sbjct: 256 TGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELA 299
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +2
Query: 266 GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 445
G VR ++GGA R Q ++RG IV+ATPGRL+DFLE+ LQ +VLDEA
Sbjct: 137 GKKKGVRVVTIYGGASYRTQIDGIKRGAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEA 196
Query: 446 DRMLDMGFEPQIRKIIEQIRPTD 514
D ML MGF+ + I+ +P D
Sbjct: 197 DEMLSMGFKEALETILSATQPDD 219
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/74 (50%), Positives = 49/74 (66%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
++GG Q R L R EI++ TPGRL+D + +GT +L Y+VLDEAD MLDMGF P
Sbjct: 105 IYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLP 164
Query: 476 QIRKIIEQIRPTDR 517
I+KI+ Q P +R
Sbjct: 165 DIQKILSQC-PRER 177
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
++ Q + G+++PTPIQ + PIAM+G +L+G
Sbjct: 14 DLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMG 46
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ QTG+GKT ++ +P + N+ + +G+G ALVL PTRELA
Sbjct: 47 QAQTGTGKTASFGIPIL----NR--VIKGEGLQALVLCPTRELA 84
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V GG P Q L G ++V+ATPGRL+D ++G L + TYLV+DEADRML MG E
Sbjct: 147 VCGGVPVSTQTIALREGADVVVATPGRLLDLCKRGALCLDKITYLVMDEADRMLGMGMEE 206
Query: 476 QIRKIIEQIRPTDR 517
Q+RKI+ T R
Sbjct: 207 QLRKIVGLATGTSR 220
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTLAY LP + + + P GD P+AL+L PTREL
Sbjct: 85 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTREL 125
Score = 33.1 bits (72), Expect = 6.5
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
RQTL+WSAT P+ +++LA + + I I +G
Sbjct: 222 RQTLLWSATLPESLERLARSAVLNPITIQVG 252
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/88 (42%), Positives = 52/88 (59%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
S G S +R V+GG +Q + RG I++ TPGR +D +++G N + +Y V
Sbjct: 89 SEALGKRSGIRTVVVYGGVSINKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFV 148
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRPTDR 517
LDEAD MLDMGF I+KII + P +R
Sbjct: 149 LDEADEMLDMGFIEDIKKII-NVLPVER 175
Score = 39.5 bits (88), Expect = 0.075
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
R++TGSGKT AY++P I + + IR AL+L PTRELA
Sbjct: 45 RSKTGSGKTAAYLIPIINNTAKEKGIR------ALILLPTRELA 82
Score = 36.7 bits (81), Expect = 0.53
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 1 RHEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
R+E+ + ++ GY EPT +Q+ PIA++G +LV
Sbjct: 10 RNELIESIRGTGYSEPTEVQSMAIPIALAGSDLV 43
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GGAPK EQAR + ++I TPGRL+D + G+ + + YLVLDEADRMLD GFE
Sbjct: 270 VYGGAPKSEQAR-AAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQ 328
Query: 476 QIRKII 493
IR II
Sbjct: 329 DIRNII 334
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
+RQT+ +SATWP+ V+ LA +L D ++I IGS +L+A+ NI Q+
Sbjct: 345 SRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQI 389
Score = 41.1 bits (92), Expect = 0.024
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++++G+K YKEPTPIQA WP ++G+++VG+
Sbjct: 177 KLREGLKN--YKEPTPIQAATWPYLLAGRDVVGI 208
Score = 37.5 bits (83), Expect = 0.30
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT+A+ +PA+ ++N + P LV++PTRELA
Sbjct: 210 ETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELA 249
>UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and RNA
helicases; n=1; Bifidobacterium longum DJO10A|Rep:
COG0513: Superfamily II DNA and RNA helicases -
Bifidobacterium longum DJO10A
Length = 670
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
HT + T V+GG Q RDL+ G +IV+A PGRL D L + L +V+DEAD
Sbjct: 134 HTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLEDLLRQQALTLSSVEVVVIDEAD 193
Query: 449 RMLDMGFEPQIRKIIEQIRP 508
M DMGF P +++++EQI P
Sbjct: 194 EMADMGFLPPVKRLLEQISP 213
>UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=3;
Bifidobacterium|Rep: Possible ATP-dependent RNA helicase
- Bifidobacterium longum
Length = 728
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
HT + T V+GG Q RDL+ G +IV+A PGRL D L + L +V+DEAD
Sbjct: 150 HTFGMNTTTVYGGVKYIHQIRDLKAGADIVVACPGRLEDLLRQQALTLSSVEVVVIDEAD 209
Query: 449 RMLDMGFEPQIRKIIEQIRP 508
M DMGF P +++++EQI P
Sbjct: 210 EMADMGFLPPVKRLLEQISP 229
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +2
Query: 269 HTSYV--RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+T Y+ R+ VFGG R Q + L+ GV+I++ATPGRL+D + + LVLDE
Sbjct: 119 YTKYLALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDE 178
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDR 517
ADRMLDMGF I+K+IE + P +R
Sbjct: 179 ADRMLDMGFIRDIKKVIEYL-PKNR 202
Score = 37.1 bits (82), Expect = 0.40
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ QTG+GKT A+ILP I + + +R +LVL PTRELA
Sbjct: 62 KDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQ-VHSLVLTPTRELA 109
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +2
Query: 272 TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 451
T +V T V GG + Q L+ G +I++ATPGRL+D +E+G +L LVLDEADR
Sbjct: 165 TGHVAVTVV-GGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADR 223
Query: 452 MLDMGFEPQIRKIIEQIRPTDR 517
MLDMGF P +R+I+ + P +R
Sbjct: 224 MLDMGFLPAVRRIVRE-TPAER 244
Score = 34.7 bits (76), Expect = 2.1
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 19/61 (31%)
Frame = +3
Query: 111 QTGSGKTLAYILPA---IVHINNQPPIR----------------RGDGPIALVLAPTREL 233
QTG+GKT A++LP + HI P+R G GP+ LV+ PTREL
Sbjct: 91 QTGTGKTAAFLLPTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTREL 150
Query: 234 A 236
A
Sbjct: 151 A 151
Score = 33.9 bits (74), Expect = 3.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
E+ + ++ +GY PTP+QA P+ + G++L+
Sbjct: 56 EMLRAIENLGYTAPTPVQAGSIPVVLEGRDLL 87
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 77.8 bits (183), Expect = 2e-13
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
H VR V+GG+ +EQAR++ RG +IV+ATPGR+ D + + ++ + +Y VLDEAD
Sbjct: 96 HIKGVRVVAVYGGSNIQEQAREISRGAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEAD 155
Query: 449 RMLDMGFEPQIRKIIEQIRPTDRL 520
ML+MGF I I+ P D+L
Sbjct: 156 EMLNMGFYEDITNILAD-TPEDKL 178
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/37 (37%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +1
Query: 496 ANTP-NRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
A+TP ++ T ++SAT P+EV ++A++++ D ++I +G
Sbjct: 171 ADTPEDKLTWLFSATMPREVARIAKEFMHDPLEITVG 207
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDM 463
R + GG +QA + +G EI+IATPGRL D LEK L +C Y+VLDEAD M+D+
Sbjct: 519 RVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDL 578
Query: 464 GFEPQIRKIIE 496
GFEPQ+ +++
Sbjct: 579 GFEPQVTSVLD 589
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/44 (52%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTREL 233
+TGSGKT A+++P +++I+ QP + + DGP ALV+APTREL
Sbjct: 458 ETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTREL 501
Score = 40.3 bits (90), Expect = 0.043
Identities = 12/34 (35%), Positives = 28/34 (82%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ + ++ +GY++P+PIQ Q PI+++G++++G+
Sbjct: 423 EILEAIRQLGYEKPSPIQMQSIPISLTGRDILGI 456
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 77.4 bits (182), Expect = 3e-13
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GG R Q L +GV+I+IATPGRL+D L T+L + LVLDEADRMLDMGF P
Sbjct: 111 VYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLP 170
Query: 476 QIRKIIEQIRPTDR 517
I++I++++ P +R
Sbjct: 171 DIQRIMKRM-PEER 183
Score = 39.9 bits (89), Expect = 0.056
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELA 236
QTG+GKT AY LP I ++ Q P AL+LAPTRELA
Sbjct: 48 QTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELA 90
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+ V+GG EQ + LE I++ATPGRL+D + + NL YL+LDEAD ML+
Sbjct: 100 IHTEAVYGGKKIEEQIKKLETPKHILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLN 159
Query: 461 MGFEPQIRKIIEQIRPTDR 517
MGF P I KI++ +PT R
Sbjct: 160 MGFLPDIDKIMKIAKPTAR 178
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
QTG+GKT A+ LP + IN P +++ LVL PTREL
Sbjct: 47 QTGTGKTAAFGLPVLQQIN--PSLQQTQ---VLVLVPTREL 82
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRM 454
VR+TC+ GG +QARDL R I+IATPGRL+D LE KG +L++ +LV+DEADR+
Sbjct: 178 VRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKG-FSLRKLKFLVMDEADRL 236
Query: 455 LDMGFEPQIRKIIEQIRPTDR 517
LDM F P + +I++ I +R
Sbjct: 237 LDMEFGPVLDRILKIIPTQER 257
Score = 35.5 bits (78), Expect = 1.2
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +3
Query: 21 CKDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHI-NNQPPIRRGDG 197
CK+ + S + + + QTGSGKT A+ +P + + ++Q P
Sbjct: 96 CKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPY----- 150
Query: 198 PIALVLAPTRELAXXXXXXXXXXDTHLMFVTRVCLV 305
A +LAPTRELA + LM V C+V
Sbjct: 151 -YACILAPTRELAQQIKETFDSLGS-LMGVRSTCIV 184
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ Q K + Y +PTPIQ++ P A+ G +++G+
Sbjct: 91 ELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGL 124
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/80 (46%), Positives = 50/80 (62%)
Frame = +2
Query: 278 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
Y+ CV+GG Q L RGV++V+ TPGR+ID +E + L YLVLDEAD+ML
Sbjct: 206 YLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQML 265
Query: 458 DMGFEPQIRKIIEQIRPTDR 517
+GFE + I+E + PT R
Sbjct: 266 AVGFEEAVESILENL-PTKR 284
Score = 37.5 bits (83), Expect = 0.30
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQ----PPIRR-GDGPIALVLAPTRELA 236
R +TG+GKTLA+ +P I + + RR G P LVLAPTRELA
Sbjct: 145 RAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELA 193
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R+ GG R Q ++RGV IV+ATPGRL D L K +L C YL LDEADR++D
Sbjct: 257 LRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVD 316
Query: 461 MGFEPQIRKIIEQIR 505
+GFE IR++ + +
Sbjct: 317 LGFEDDIREVFDHFK 331
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA 236
TGSGKTL ++LP I+ + PI G+GPI L++ P+RELA
Sbjct: 192 TGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELA 235
Score = 36.7 bits (81), Expect = 0.53
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+K G +PTPIQ QG P+ ++G++++G+
Sbjct: 161 LKEKGIVQPTPIQVQGLPVILAGRDMIGI 189
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 77.4 bits (182), Expect = 3e-13
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
+ GG EQ+ L G EI+IATPGRL+D +E+ L +C Y+++DEADRM+D+GFE
Sbjct: 489 IVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEE 548
Query: 476 QIRKIIEQI 502
+ KI++ +
Sbjct: 549 PVNKILDAL 557
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 5/46 (10%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLAPTRELA 236
TGSGKT A++LP +V+I P + R+ DGP A++LAPTRELA
Sbjct: 423 TGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELA 468
Score = 35.5 bits (78), Expect = 1.2
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+ +GYK+P+PIQ PIA+ ++L+GV
Sbjct: 392 IDKVGYKDPSPIQRAAIPIALQNRDLIGV 420
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/102 (36%), Positives = 61/102 (59%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
L + ++T + S +G +R +FGG + Q R LE+G++I++ATPGRL+D +
Sbjct: 81 LAPTRELATQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLLDLI 140
Query: 392 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPTDR 517
+G +L + VLDE D+MLDMG +++II + P +R
Sbjct: 141 NQGFIDLSHVEHFVLDETDQMLDMGMLHDVKRIITYL-PRER 181
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELA 236
QTG+GKT A+ +P + + + +G I ALVLAPTRELA
Sbjct: 46 QTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELA 88
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
+Q+ + GY E TPIQA+ P + G +L+G
Sbjct: 12 IQKALAAQGYSEATPIQAEAIPHLLEGLDLLG 43
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 77.0 bits (181), Expect = 4e-13
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F SY++ V+GG R Q + RG +VIATPGRL+DF+++ + ++VLDE
Sbjct: 341 FAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDE 400
Query: 443 ADRMLDMGFEPQIRKIIEQI 502
ADRMLDMGF +R+I+ +
Sbjct: 401 ADRMLDMGFSEDMRRIMTHV 420
Score = 40.7 bits (91), Expect = 0.032
Identities = 16/38 (42%), Positives = 28/38 (73%)
Frame = +1
Query: 490 H*ANTPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
H P QTLM+SAT+P+E++++A ++L +Y+ + IG
Sbjct: 419 HVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIG 456
Score = 38.3 bits (85), Expect = 0.17
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKT A++LP + + P P ++++PTRELA
Sbjct: 290 QTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELA 331
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +2
Query: 266 GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLD 439
G + +R+ C+ GG EQARDL R ++IATPGRLID LE KG +L++ YLV+D
Sbjct: 190 GSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLIDHLEHTKG-FSLKKLQYLVMD 248
Query: 440 EADRMLDMGFEPQIRKIIEQIRPTDRL 520
E DRM+D+ + I +I++QI R+
Sbjct: 249 EVDRMIDLDYAKAIDQILKQIPSHQRI 275
Score = 37.9 bits (84), Expect = 0.23
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ + ++++ Y +PTPIQA P A+ GK++VG+
Sbjct: 108 ELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGI 141
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT A+ +P + Q ALVLAPTRELA
Sbjct: 143 ETGSGKTAAFAIPIL-----QTLYTAAQPYYALVLAPTRELA 179
>UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10;
Streptomyces|Rep: Probable DEAD-box RNA helicase -
Streptomyces coelicolor
Length = 498
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R V GG QA L G E+V+ATPGRL D +++G L + + VLDEAD+M D
Sbjct: 169 LRLATVVGGMSIGRQASALRGGAEVVVATPGRLKDLIDRGDCRLNQVSVTVLDEADQMAD 228
Query: 461 MGFEPQIRKIIEQIRP 508
MGF PQ+ +++Q+RP
Sbjct: 229 MGFMPQVTALLDQVRP 244
Score = 37.9 bits (84), Expect = 0.23
Identities = 23/59 (38%), Positives = 33/59 (55%)
Frame = +3
Query: 60 SSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
++ L +S ++ R +TGSGKTLA+ L + + R P+ LVL PTRELA
Sbjct: 97 AATLPNSLAGRDIMGRGRTGSGKTLAFGLALLARTAGRRAEPR--QPLGLVLVPTRELA 153
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 76.6 bits (180), Expect = 5e-13
Identities = 31/72 (43%), Positives = 50/72 (69%)
Frame = +2
Query: 287 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 466
+ C+FGG Q + + +GV++++A PGRL+D +G+ +L R LVLDEADRMLDMG
Sbjct: 110 SACIFGGVGMNPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMG 169
Query: 467 FEPQIRKIIEQI 502
F ++K++ ++
Sbjct: 170 FIHDVKKVLARL 181
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/78 (43%), Positives = 53/78 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G +R+ +FGG ++ Q L++GV+I++ATPGRL+D +G +L R VLDE
Sbjct: 95 YGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDE 154
Query: 443 ADRMLDMGFEPQIRKIIE 496
ADRMLDMGF +R++++
Sbjct: 155 ADRMLDMGFLHDVRRVLK 172
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELA 236
QTG+GKT A+ P + + P R PI +L+L PTRELA
Sbjct: 46 QTGTGKTCAFAAPILQRLGGDIPAGR---PIRSLILTPTRELA 85
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +2
Query: 245 SASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 424
S S G + +R ++GG +Q R L GV++V+A PGRL+D + +GT ++
Sbjct: 87 SDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDVCGVE 146
Query: 425 YLVLDEADRMLDMGFEPQIRKIIE 496
L++DEADRM DMGF+P I+ I++
Sbjct: 147 TLIIDEADRMFDMGFQPDIQSILK 170
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
V GV+ GYKEPTPIQAQ P M+G +++G+
Sbjct: 12 VMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGL 44
Score = 36.3 bits (80), Expect = 0.70
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT AY LP I + + P RG LV+APTRELA
Sbjct: 46 QTGTGKTAAYALPIIQKMLSTP---RG-RVRTLVIAPTRELA 83
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/86 (43%), Positives = 52/86 (60%)
Frame = +2
Query: 245 SASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 424
S S +G +R+ VFGG P Q + L GV++++ATPGRL+D ++ +
Sbjct: 90 SESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLE 149
Query: 425 YLVLDEADRMLDMGFEPQIRKIIEQI 502
LVLDEADRMLDMGF I+KI+ +
Sbjct: 150 VLVLDEADRMLDMGFIRDIKKILAML 175
Score = 34.3 bits (75), Expect = 2.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
+Q+ V GY P+PIQAQ P ++GK+++
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVM 42
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ QTG+GKT + LP + ++ + G ALVL PTRELA
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQ-IRALVLTPTRELA 86
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 76.6 bits (180), Expect = 5e-13
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GG P Q + L++GV+I+I TPGR++D +++GT +L ++LDEAD MLDMGF
Sbjct: 107 VYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFRE 166
Query: 476 QIRKIIEQIRPTDR 517
I I+E I P +R
Sbjct: 167 DIEYILEDI-PYER 179
Score = 37.5 bits (83), Expect = 0.30
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +3
Query: 27 DNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 206
D G + S + K+ + + QTG+GKT A+ +P + +I+++ + A
Sbjct: 21 DMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSE-----DNNLQA 75
Query: 207 LVLAPTRELA 236
++L PTRELA
Sbjct: 76 IILCPTRELA 85
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 76.6 bits (180), Expect = 5e-13
Identities = 30/70 (42%), Positives = 49/70 (70%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 472
C++GG P +Q R L+ GV++ + TPGR+ID +++G NL ++VLDEAD+ML +GF
Sbjct: 209 CLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFA 268
Query: 473 PQIRKIIEQI 502
+ I+E++
Sbjct: 269 EDVEIILEKL 278
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 33 GLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIAL 209
G+++ + L + ++ R +TG+GKTLA+ +P I I RG P+ L
Sbjct: 123 GIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCL 182
Query: 210 VLAPTRELA 236
VLAPTRELA
Sbjct: 183 VLAPTRELA 191
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 76.2 bits (179), Expect = 7e-13
Identities = 29/72 (40%), Positives = 49/72 (68%)
Frame = +2
Query: 278 YVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
++ TC++GG Q + RG+++V+ TPGR++D++ K T +L + ++VLDE DRML
Sbjct: 200 HLSTTCIYGGTSYWPQESAIRRGLDVVVGTPGRILDYIRKNTLDLSKLKHVVLDEVDRML 259
Query: 458 DMGFEPQIRKII 493
DMGF + +I+
Sbjct: 260 DMGFAESVEEIL 271
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ +TG+GKTL+++LP +V Q P + G PI L LAPTRELA
Sbjct: 145 QARTGTGKTLSFVLP-LVEKWQQFPQKSGRQPIILALAPTRELA 187
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/73 (45%), Positives = 50/73 (68%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R+ ++GGA Q + L +G +IV+ATPGRL+D + K +L+ LVLDEADRMLD
Sbjct: 104 IRSVAIYGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLD 163
Query: 461 MGFEPQIRKIIEQ 499
+GF ++ I++Q
Sbjct: 164 LGFADELDDILDQ 176
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT ++LP + +++ P + ALVL PTRELA
Sbjct: 46 ETGSGKTAGFVLPLLEKLHS-IPAPGNNLTHALVLVPTRELA 86
Score = 34.3 bits (75), Expect = 2.8
Identities = 16/34 (47%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Frame = +1
Query: 502 TP-NRQTLMWSATWPKEVKKLAEDYLGDYIQINI 600
TP N QTL++SAT+P +VK+L E+ L + ++I++
Sbjct: 177 TPGNVQTLLFSATFPDKVKELTEELLRNPVEISV 210
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 76.2 bits (179), Expect = 7e-13
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +2
Query: 266 GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 445
G + +R + V GG P Q L+RG++++IATPGRL+D +++ +L VLDEA
Sbjct: 243 GDSLDLRLSVVVGGVPYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSLAEVDVAVLDEA 302
Query: 446 DRMLDMGFEPQIRKIIEQIRP 508
D M D+GF P +R I+E +P
Sbjct: 303 DHMADLGFLPNVRAILEGTKP 323
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/68 (39%), Positives = 34/68 (50%)
Frame = +3
Query: 33 GLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 212
G+ A S L D ++ R +TGSGKTL + LP + + Q R P LV
Sbjct: 165 GMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLV 224
Query: 213 LAPTRELA 236
L PTRELA
Sbjct: 225 LVPTRELA 232
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 76.2 bits (179), Expect = 7e-13
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Frame = +2
Query: 137 LHLASHCAHKQPTA--YSER*WSDCFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGA 310
L + +H H TA + E +C + + + + F + VR ++GG
Sbjct: 344 LPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGT 403
Query: 311 PKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 490
R + +G I+ ATPGRL+D + K L++ YLVLDEADRMLDMGF P+++K+
Sbjct: 404 QLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKL 463
Query: 491 I 493
I
Sbjct: 464 I 464
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/34 (44%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSL 609
RQTLM+SAT+P+E+++LA ++L +Y+ + +G +
Sbjct: 475 RQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQV 508
Score = 36.3 bits (80), Expect = 0.70
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQ----PPIRRGDGPIALVLAPTREL 233
QTGSGKT A++LP + H+ + + P +++APTREL
Sbjct: 333 QTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTREL 377
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Frame = +2
Query: 293 CVFGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 466
C+FGG+ K EQ L + GV+I+ ATPGRL DFL +G+ +L ++ VLDEADRMLD G
Sbjct: 290 CIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISLANVSFAVLDEADRMLDRG 349
Query: 467 FEPQIRKIIEQIRPTDR 517
F I+ I+ P ++
Sbjct: 350 FSEDIKLILSGCPPKEQ 366
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
RQTLM++ATWP +++KLAE Y+ + Q+ IG
Sbjct: 367 RQTLMFTATWPLDIQKLAESYMINPAQVTIG 397
Score = 37.1 bits (82), Expect = 0.40
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 5/47 (10%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-----RGDGPIALVLAPTRELA 236
+TGSGKT+A+ LP + + ++P + R P A++++PTRELA
Sbjct: 224 ETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELA 270
Score = 36.7 bits (81), Expect = 0.53
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGV 108
Y PTPIQ+ WP ++SG++++G+
Sbjct: 199 YTNPTPIQSASWPFSLSGRDVIGI 222
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 75.8 bits (178), Expect = 9e-13
Identities = 32/78 (41%), Positives = 53/78 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G + +++ +FGG ++ Q L G++I++ATPGRL+D + +G +L + VLDE
Sbjct: 94 YGRYTGLKHAVIFGGVGQKPQTDALRSGIQILVATPGRLLDLISQGFISLSSLDFFVLDE 153
Query: 443 ADRMLDMGFEPQIRKIIE 496
ADRMLDMGF I++I++
Sbjct: 154 ADRMLDMGFIHDIKRILK 171
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
+ + ++ GY PTPIQ Q PI + GK+L+G
Sbjct: 12 ILKALRQEGYTSPTPIQEQSIPILLQGKDLLG 43
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 75.8 bits (178), Expect = 9e-13
Identities = 38/79 (48%), Positives = 49/79 (62%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G R V+GGAP Q R L +GV++V+ATPGR +D + +GT L +VLDE
Sbjct: 151 YGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDE 210
Query: 443 ADRMLDMGFEPQIRKIIEQ 499
AD MLDMGF I I+EQ
Sbjct: 211 ADEMLDMGFAEDIDAILEQ 229
Score = 40.7 bits (91), Expect = 0.032
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELA 236
TG+GKT A+ LP + + + R GD GP ALVL PTRELA
Sbjct: 103 TGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELA 141
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +1
Query: 1 RHEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
R E+ + + +GY+EPTPIQ + P ++G++L+G
Sbjct: 65 RPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLG 99
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 75.8 bits (178), Expect = 9e-13
Identities = 41/105 (39%), Positives = 60/105 (57%)
Frame = +2
Query: 203 CFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 382
C L + ++T + S D+G + +FGG Q + L GV++V+ATPGRL+
Sbjct: 141 CLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKALAAGVDVVVATPGRLM 200
Query: 383 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPTDR 517
D L + + +L VLDEAD+MLD+GF IRKI Q+ P +R
Sbjct: 201 DHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQL-PKER 244
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNLVGV 108
GY PTPIQAQ P+ MSG++L+G+
Sbjct: 84 GYTVPTPIQAQAIPLVMSGRDLLGI 108
Score = 37.1 bits (82), Expect = 0.40
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT A+ LP + + + +P RRG LVL+PTRELA
Sbjct: 110 QTGTGKTAAFALPILHRLAEDKKPAPRRGFR--CLVLSPTRELA 151
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
DFG + VR+T + GG +Q DL G +IVIAT GRL+DF+++ L L+LD
Sbjct: 92 DFGRFTDVRSTIIHGGVGYGKQRSDLRAGTDIVIATVGRLMDFIKEKEIRLDSVEVLILD 151
Query: 440 EADRMLDMGFEPQIRKII 493
E DRMLDMGF +++I+
Sbjct: 152 EVDRMLDMGFINDVKRIV 169
Score = 39.1 bits (87), Expect = 0.099
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
QTG+GKT A+ LP + + P GP LVL PTREL
Sbjct: 46 QTGTGKTAAFALPVLARLGGHRP----GGPRVLVLEPTREL 82
Score = 37.9 bits (84), Expect = 0.23
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +1
Query: 16 QGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
+GV+ MGY +PTP+Q + P+ ++G++LV
Sbjct: 14 RGVQAMGYVDPTPVQLRAIPVVLAGRDLV 42
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/74 (48%), Positives = 51/74 (68%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R+T +FGG +Q DL G EIV+AT GRL+D +++ +L + +VLDEADRMLD
Sbjct: 134 LRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLD 193
Query: 461 MGFEPQIRKIIEQI 502
MGF IRKI++ +
Sbjct: 194 MGFIDDIRKIMQML 207
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
RQTL++SAT+ ++KLA+D++ + + + Q + N N+ Q I V ++K+
Sbjct: 211 RQTLLFSATFSAPIRKLAQDFMNAPETVEVAA-QNTTNANVEQHIIAVDTIQKR 263
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDG--PI-ALVLAPTRELA 236
QTG+GKT A++LP++ + P+ LVL PTRELA
Sbjct: 74 QTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELA 118
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 75.8 bits (178), Expect = 9e-13
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 445
HT + ++ +FGG +Q R L V +IV+ATPGRL+DF +G +L + LV+DEA
Sbjct: 217 HTPF-KSVAIFGGMDYEKQKRRLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDEA 275
Query: 446 DRMLDMGFEPQIRKIIEQIRP 508
DRMLDMGF P +++II P
Sbjct: 276 DRMLDMGFIPDVQRIIHYTPP 296
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELA 236
R QTG+GKT +I+ + N P RR P ALVLAPTRELA
Sbjct: 159 RAQTGTGKTAVFIITMLTQFLRNPAPEGRRKGTPRALVLAPTRELA 204
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
H VR V+GG P QA L RG ++V+ TPGR++D + +GT L VLDEAD
Sbjct: 99 HLRGVRILSVYGGQPIEPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEAD 158
Query: 449 RMLDMGFEPQIRKIIEQI 502
MLDMGF I +I+ ++
Sbjct: 159 EMLDMGFREDIERILSEM 176
>UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=30;
cellular organisms|Rep: DEAD/DEAH box helicase-like
protein - Silicibacter sp. (strain TM1040)
Length = 710
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G V +CV GG R++ R LERG IV+ATPGRL D + +G+ +L +VLDE
Sbjct: 100 YGDAGAVLASCV-GGMDMRDERRALERGAHIVVATPGRLRDHITRGSIDLSGVAAVVLDE 158
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDR 517
AD MLD+GF + I+E+ P DR
Sbjct: 159 ADEMLDLGFREDLEFILEE-TPEDR 182
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKT+ + L A + R P+ALV+APTRELA
Sbjct: 47 QTGSGKTVGFGLAIAPTILGEDGTFERAASPLALVIAPTRELA 89
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
+ GG +Q + L+RGV+++IATPGRL+D E+G + +LV+DEADRMLDMGF P
Sbjct: 107 LIGGVSFGDQEKKLDRGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIP 166
Query: 476 QIRKIIEQIRP 508
I +I + P
Sbjct: 167 DIERIFKMTPP 177
Score = 39.5 bits (88), Expect = 0.075
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
P +QTL +SAT P E+ +L + +L D ++I S + N NI QL + V + K
Sbjct: 177 PKKQTLFFSATMPPEITRLTKQFLKDPVRIE-ASRPATTNENITQLMVKVPSSDPK 231
Score = 38.7 bits (86), Expect = 0.13
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT A+ LP I + N R P ALV+APTRELA
Sbjct: 47 QTGTGKTAAFTLPLIDKLMNGRAKAR--MPRALVIAPTRELA 86
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 16 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
Q V GY TPIQA P+A++G++++G+
Sbjct: 15 QAVADTGYTTATPIQAAAIPVALAGQDVLGI 45
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/65 (56%), Positives = 44/65 (67%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
++GG P R QA L +G I+I TPGR+ D L KGT L+ LVLDEADRMLDMGF
Sbjct: 106 LYGGVPLRAQADSLAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYE 165
Query: 476 QIRKI 490
+I KI
Sbjct: 166 EIIKI 170
Score = 35.9 bits (79), Expect = 0.92
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ +++TGSGKTLA+ +PA++ + + + P +V+ PTRELA
Sbjct: 41 KDILAQSKTGSGKTLAFGIPAVMGTD-----VKSNKPQTIVITPTRELA 84
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 496 ANTPN-RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNIL 636
+N P +QTL++SAT+P +++ LA+ L D + I + ++Q + N L
Sbjct: 172 SNMPKQKQTLLFSATFPPKIESLAKALLKDPLTIKVDTVQEAMKINEL 219
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/87 (42%), Positives = 50/87 (57%)
Frame = +2
Query: 257 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 436
A H + V+GG P R Q L+R IV+ TPGR+ID + + L+ +VL
Sbjct: 95 AKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVL 154
Query: 437 DEADRMLDMGFEPQIRKIIEQIRPTDR 517
DEADRMLD+GF P I KI+ + P +R
Sbjct: 155 DEADRMLDIGFRPDIEKILRRC-PEER 180
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ +TG+GKT A+ +P I + + P R P AL+L PTRELA
Sbjct: 47 QARTGTGKTAAFGIPIIERLEHGPNSR---NPQALILTPTRELA 87
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/65 (55%), Positives = 44/65 (67%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
+ GG Q R LERG +++IATPGRL+D E+GT L LV+DEADRMLDMGF P
Sbjct: 111 LIGGVSFDHQDRKLERGADVLIATPGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIP 170
Query: 476 QIRKI 490
I +I
Sbjct: 171 DIERI 175
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT +++LP + + R P L+L PTRELA
Sbjct: 51 QTGTGKTASFVLPMLTLLEKGRAKAR--MPRTLILEPTRELA 90
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +2
Query: 290 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 469
T ++GG Q R L GV+IV+ATPGR DFLEKGT + R LDEAD MLD+GF
Sbjct: 190 TALYGGVAYANQERVLRSGVDIVVATPGRAKDFLEKGTLHFDRVVMACLDEADHMLDIGF 249
Query: 470 EPQIRKIIEQI 502
+ I ++ Q+
Sbjct: 250 KDDIELLLSQV 260
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELA 236
+ +TGSGKTLA+ +P + + P + RG GP A++ PTRELA
Sbjct: 129 QARTGSGKTLAFGIPIVERLLKLPSHLTRGRGPAAVIFCPTRELA 173
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADR 451
+R V+GG+ Q L+RGVEI++ TPGR+ID L TNL R +++VLDEADR
Sbjct: 771 LRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADR 830
Query: 452 MLDMGFEPQIRKIIEQIR 505
+LD+GFE QI I+ R
Sbjct: 831 LLDLGFESQIHNILNNCR 848
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL+
Sbjct: 714 ETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELS 755
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQ---RCTYLVLDEADR 451
+ + C GG+ ++Q L+ GVEI IATPGR ID L NL R +++V+DEADR
Sbjct: 355 ISSICCTGGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLRISFVVMDEADR 414
Query: 452 MLDMGFEPQIRKIIEQIRP 508
+ D GFEPQI ++ +RP
Sbjct: 415 LFDFGFEPQIASVLRTVRP 433
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/44 (56%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELA 236
++TGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA
Sbjct: 296 SKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELA 339
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F S ++ ++GG Q + + +GV+I++ATPGRL+D + KG ++VLDE
Sbjct: 404 FSKDSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVLDE 463
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGF P + K++
Sbjct: 464 ADRMLDMGFLPDVEKVL 480
Score = 40.7 bits (91), Expect = 0.032
Identities = 22/54 (40%), Positives = 36/54 (66%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
RQTLM+SAT+P+E+++LA +L +Y+ + +G + SA +I Q VK K+
Sbjct: 491 RQTLMFSATFPQEIQQLAAKFLNNYVFVTVGIVG-SACTDIEQSFFEVKKSDKR 543
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLV 102
+K GY +PTP+Q G PI +SG++L+
Sbjct: 317 IKKSGYTKPTPVQKYGIPILLSGRDLM 343
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/78 (48%), Positives = 47/78 (60%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
HT + VFGG R Q RGV+++I TPGRL+D L +LVLDEAD
Sbjct: 96 HTP-ISAAAVFGGVSIRPQEHAFRRGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEAD 154
Query: 449 RMLDMGFEPQIRKIIEQI 502
RMLDMGF P IR+I++ I
Sbjct: 155 RMLDMGFLPDIRRILKHI 172
Score = 37.1 bits (82), Expect = 0.40
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +3
Query: 24 KDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 203
K+ G R + + + ++ TGSGKT A++LP + + ++P RG
Sbjct: 17 KELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQLIDRP---RGT-TR 72
Query: 204 ALVLAPTRELA 236
ALV+ PTRELA
Sbjct: 73 ALVITPTRELA 83
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 16 QGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
+ +K +G+ PTPIQA P AMSG++++
Sbjct: 14 KALKELGFPRPTPIQADAIPPAMSGRDVM 42
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFL---EKGTTNLQRCTYLVLDEADRMLDMG 466
V+GG+ Q L++GVEI++ TPGR+ID L TNL R +++VLDEADR+LD+G
Sbjct: 676 VYGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRASFIVLDEADRLLDLG 735
Query: 467 FEPQIRKIIEQIR 505
FE QI I+ R
Sbjct: 736 FESQIHSILNNCR 748
Score = 56.4 bits (130), Expect = 6e-07
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+
Sbjct: 614 ETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELS 655
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F H + ++ +GG + Q + + G +++ATPGRL+DF+++G + ++VLDE
Sbjct: 272 FAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDE 331
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGF P I K++
Sbjct: 332 ADRMLDMGFLPSIEKVM 348
Score = 40.3 bits (90), Expect = 0.043
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELA 236
QTGSGKT A++LP I H ++ + + R P +++APTRELA
Sbjct: 219 QTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELA 262
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
RQTLM+SAT+P E+++LA +L +YI + +G
Sbjct: 359 RQTLMFSATFPAEIQELAGKFLHNYICVFVG 389
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 1 RHEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
R EV V+ Y +PTPIQ PI ++G++L+
Sbjct: 182 REEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GG P Q + L RGV+I+I TPGR+ID +++ T L + +VLDEAD+MLDMGF
Sbjct: 107 VYGGQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFRE 166
Query: 476 QIRKIIEQIRPTDR 517
I +I+ I P +R
Sbjct: 167 DIEEILSHI-PKER 179
Score = 33.5 bits (73), Expect = 4.9
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +1
Query: 16 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
+ ++ +GY+EPTPIQ + P+ ++G ++ G
Sbjct: 17 KAIRDIGYEEPTPIQQEVIPLILAGNDVAG 46
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 74.9 bits (176), Expect = 2e-12
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GG Q R+L RGV+IV+ TPGR++D + + T L+ +Y+VLDEAD ML+MGF
Sbjct: 105 VYGGQSIDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFID 164
Query: 476 QIRKIIEQIRPTDRL 520
+ +I++ + R+
Sbjct: 165 DVEEILKSVSTEKRM 179
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ QTG+GKT A+ +P + I+ + AL+LAPTRELA
Sbjct: 46 QAQTGTGKTAAFGIPILETIDESSRNTQ-----ALILAPTRELA 84
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 293 CVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 469
C+ G E A L G EI++ATPGRL+D LE+ L +C+Y+VLDEADRM+D GF
Sbjct: 366 CLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERHLLVLSQCSYVVLDEADRMVDGGF 425
Query: 470 EPQIRKIIEQIRPTD 514
E I KI+ + P++
Sbjct: 426 EDSIHKILAALPPSN 440
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELAXXXXXXXXXXDTHL 278
++TGSGKT A++LP + +I PP + + +GP AL+LAPTRELA T +
Sbjct: 301 SKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAEVIKFATRM 360
Query: 279 MFVTRVCLV 305
F T VCL+
Sbjct: 361 GF-TVVCLI 368
Score = 39.9 bits (89), Expect = 0.056
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
H ++ +K +GY EPTP+Q PIA+ ++L+G+ K
Sbjct: 266 HVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLIGISK 302
Score = 35.9 bits (79), Expect = 0.92
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Frame = +1
Query: 502 TPN---RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 609
TPN RQT+M+SAT P V+++A++YL + IG++
Sbjct: 459 TPNLRYRQTVMYSATMPPSVERIAKNYLKHPAMVTIGTI 497
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGG---APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
F + V + V+GG A +Q + L G IVIATPGRL+ L+ GT NL++ +LV
Sbjct: 93 FSYFINVSSIAVYGGGDGATWDQQRKALTDGANIVIATPGRLLAQLQSGTANLKQIKHLV 152
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRPTDR 517
LDEADRMLDMGF I ++I + PT+R
Sbjct: 153 LDEADRMLDMGFYDDIVRVISYL-PTER 179
Score = 34.7 bits (76), Expect = 2.1
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT AY+LP + I D LVL PTRELA
Sbjct: 46 QTGTGKTAAYMLPILHKIIES----NTDSLDTLVLVPTRELA 83
Score = 32.7 bits (71), Expect = 8.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLV 102
+ +MG+ +PTPIQ + P+ MS +LV
Sbjct: 16 LSSMGFNKPTPIQTEAIPVIMSNSDLV 42
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
VR +GGAP+ QAR L G ++++A PGRL DFL+ G ++LV DEADR+LD
Sbjct: 215 VRVCEAYGGAPREAQARRLHNGCDVLVACPGRLKDFLQNGDVIFDEVSFLVFDEADRLLD 274
Query: 461 MGFEPQIRKII 493
MGF+ Q+ I+
Sbjct: 275 MGFKVQLDDIL 285
Score = 41.1 bits (92), Expect = 0.024
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 514 QTLMWSATWPKEVKKLAEDYLGD---YIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
QT+MWSATWP V++LA++YL I+ L N NI Q F ++++
Sbjct: 295 QTMMWSATWPPVVEQLAQEYLSQNRYVIRSGTAGTGLQVNENIKQHIFFADAPEERV 351
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
TGSGKT+A+ +PA+ P P +VLAPTREL
Sbjct: 164 TGSGKTVAFAVPALKKFQWSP----NGSPRIVVLAPTREL 199
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +2
Query: 302 GGAPKREQARDLE-RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 478
GG +Q + LE R +I++ATPGRL+DF ++G +L +VLDEADRMLDMGF PQ
Sbjct: 120 GGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQ 179
Query: 479 IRKIIEQIRP 508
+R+II Q P
Sbjct: 180 VRQIIRQTPP 189
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIR-RGDG-PIALVLAPTREL 233
R QTG+GKT A+++ I + PP + R G P AL++APTREL
Sbjct: 52 RAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTREL 96
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +2
Query: 266 GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 445
G + V+ ++GG Q R L GV++VI TPGR++D L + T +L + +VLDEA
Sbjct: 98 GRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEA 157
Query: 446 DRMLDMGFEPQIRKIIEQIRPTDR 517
D MLDMGF I KI+ Q P +R
Sbjct: 158 DEMLDMGFIEDIEKIL-QNTPAER 180
Score = 39.9 bits (89), Expect = 0.056
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 499 NTP-NRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLS 618
NTP RQTL++SAT P E+++LA Y+ D I I++ QL+
Sbjct: 175 NTPAERQTLLFSATMPPEIRRLAGRYMRDPITISVTPQQLT 215
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
+V + + MG++EP+PIQAQ P + GK+++G
Sbjct: 16 KVLKALDDMGFEEPSPIQAQAIPALLQGKDVIG 48
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/70 (47%), Positives = 45/70 (64%)
Frame = +2
Query: 302 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 481
GG P R Q LE G +++ TPGR++D LE+ +L T LVLDEADRML+MGF+ +
Sbjct: 126 GGEPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSL 185
Query: 482 RKIIEQIRPT 511
I++ I T
Sbjct: 186 NAIVKHIPKT 195
Score = 34.3 bits (75), Expect = 2.8
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
R TGSGKT A+ L + + + P ALVL PTRELA
Sbjct: 64 RADTGSGKTTAFALTLLAKLE-----AKSFSPQALVLCPTRELA 102
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +2
Query: 302 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 481
GGAP Q L++GV++++ATPGRL+D + G +L LVLDEADRMLDMGF I
Sbjct: 152 GGAPYNGQITALKKGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDI 211
Query: 482 RKIIEQIRPTDR 517
I+ + P DR
Sbjct: 212 SDIL-RAAPIDR 222
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKT A+++P + ++ + AL+L PTRELA
Sbjct: 89 QTGSGKTAAFVIPVLDRLSRATSFDKLTK--ALILTPTRELA 128
Score = 32.7 bits (71), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
+ ++ GY PTPIQA+ P A+ G++L+
Sbjct: 55 ILSALERSGYTHPTPIQAEAIPFALQGRDLL 85
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GG +QA+ L +GV+I++ TPGR++D E+G +L L LDEADRMLDMGF P
Sbjct: 106 VYGGTDLEKQAKTLAKGVDIIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFP 165
Query: 476 QIRKIIEQI 502
I I+E++
Sbjct: 166 DIMWIVERM 174
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ +TGSGKT A+ LP + ++ ALVLAPTRELA
Sbjct: 48 QARTGSGKTAAFGLPILERCQPSGKLQ------ALVLAPTRELA 85
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/68 (51%), Positives = 44/68 (64%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GGA Q L RGV++V+ TPGRLID LE+G +L Y VLDEAD ML +GF
Sbjct: 108 VYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADEMLSVGFAD 167
Query: 476 QIRKIIEQ 499
I I++Q
Sbjct: 168 AIETILQQ 175
Score = 49.2 bits (112), Expect = 9e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 12 ATRCKDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHI---NNQPPI 182
A R + G+ + L + K+ R +TG+GKTLA+ LP I ++ + +
Sbjct: 12 AARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSR 71
Query: 183 RRGDGPIALVLAPTRELA 236
RG P A+V+APTRELA
Sbjct: 72 ERGRLPRAIVIAPTRELA 89
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/79 (40%), Positives = 52/79 (65%)
Frame = +2
Query: 257 ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVL 436
+D G VR + +FG ++Q +L++ V IV+ATPGR++D + +G+ L+ YLV+
Sbjct: 92 SDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRILDHINRGSIKLENVKYLVI 151
Query: 437 DEADRMLDMGFEPQIRKII 493
DEAD+M + GF Q+ KI+
Sbjct: 152 DEADKMFNKGFVEQMEKIL 170
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/97 (38%), Positives = 59/97 (60%)
Frame = +2
Query: 212 LGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFL 391
L + ++T + ++ +G + V GGA QAR +E GV++++ATPGRL+D +
Sbjct: 136 LAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLLDHV 195
Query: 392 EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 502
G L +VLDEAD+MLD+GF P IR+I+ ++
Sbjct: 196 AAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKL 232
Score = 40.3 bits (90), Expect = 0.043
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAXXXXXXXXXXDTHLMF 284
QTG+GKT A++LP + I N P R ALVLAPTRELA T+ F
Sbjct: 102 QTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIADAAR---TYGKF 156
Query: 285 VTRVCLVVLLKESKPG 332
TR + V++ +KPG
Sbjct: 157 -TRPSVAVVIGGAKPG 171
Score = 33.9 bits (74), Expect = 3.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 16 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+ + Y+ PTPIQA+ P+ + G +LVG+
Sbjct: 70 RAISEQSYETPTPIQARSIPVMLEGHDLVGI 100
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/91 (40%), Positives = 57/91 (62%)
Frame = +2
Query: 245 SASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCT 424
+AS+ D+G + ++ + GG + L RG +I+IATPGRL+D +++ NL
Sbjct: 92 AASAKDYGALAGLKVQSIVGGTSVNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVE 151
Query: 425 YLVLDEADRMLDMGFEPQIRKIIEQIRPTDR 517
LVLDEAD+MLD+GF +R+ I Q+ P +R
Sbjct: 152 VLVLDEADQMLDLGFVHALRR-ISQLVPKER 181
Score = 34.3 bits (75), Expect = 2.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
V Q + GY PTPIQ Q P + G++L+G+
Sbjct: 13 VLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGI 45
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
QTG+GKT A++LP+I + LVLAPTREL
Sbjct: 47 QTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTREL 87
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINI 600
RQTL +SAT PK +K+L Y + +Q+++
Sbjct: 181 RQTLFFSATMPKAIKELVSGYCNNPVQVSV 210
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/78 (50%), Positives = 51/78 (65%)
Frame = +2
Query: 275 SYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 454
S +R+T VFGG Q L +GV+I++ATPGRLID +G +L + VLDEAD M
Sbjct: 102 SNLRSTAVFGGVSLEPQKEILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLM 161
Query: 455 LDMGFEPQIRKIIEQIRP 508
LDMGF I+K IE++ P
Sbjct: 162 LDMGFINDIKK-IEKLCP 178
Score = 39.5 bits (88), Expect = 0.075
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELA 236
QTG+GKT A+ LP I + ++ +G+ I ALV+ PTRELA
Sbjct: 46 QTGTGKTAAFALPIINLLFDKQDAEKGEKKIKALVITPTRELA 88
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +2
Query: 269 HTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEAD 448
H+ +R+ + GG + Q +DLE I++ATPGRLID ++ G+ ++ + VLDEAD
Sbjct: 96 HSEGIRSVPIIGGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFVLDEAD 155
Query: 449 RMLDMGFEPQIRKIIEQIR 505
RMLDMGF IR ++ + +
Sbjct: 156 RMLDMGFIQDIRWLLHKCK 174
Score = 39.9 bits (89), Expect = 0.056
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTREL 233
K+ + QTG+GKT+A+++P I +I + +G G ALVLAPTREL
Sbjct: 39 KDITGLAQTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTREL 82
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/77 (46%), Positives = 49/77 (63%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+G + + + GG EQ L RGV+++IATPGRL+D +G L + + LV+DE
Sbjct: 385 YGKYLRLTHALLIGGESMAEQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDE 444
Query: 443 ADRMLDMGFEPQIRKII 493
ADRMLDMGF P I KI+
Sbjct: 445 ADRMLDMGFIPDIEKIV 461
Score = 36.7 bits (81), Expect = 0.53
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
+ + ++ +GY+ PTPIQAQ P + G +++GV
Sbjct: 302 IMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGV 334
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT ++ LP + + R P +L+L PTRELA
Sbjct: 336 QTGTGKTASFTLPMLQKLAGSR--ARARMPRSLILEPTRELA 375
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V GG P + Q L RGV+++IATPGRL D + +G+ +L T L LDEAD M D+GF P
Sbjct: 119 VVGGIPIKRQVEILSRGVDLLIATPGRLADHVAQGSVSLDDVTVLALDEADHMADLGFMP 178
Query: 476 QIRKIIEQIRPTD 514
Q+ I+++ P D
Sbjct: 179 QVTTILDK-TPAD 190
Score = 41.9 bits (94), Expect = 0.014
Identities = 25/59 (42%), Positives = 34/59 (57%)
Frame = +3
Query: 60 SSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
++ + D ++ R TGSGKTLA+ LP +V + RRG P +VL PTRELA
Sbjct: 42 AATIPDVLAGRDVLGRAPTGSGKTLAFGLPMLVRLKGAAS-RRG-FPRGIVLVPTRELA 98
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = +2
Query: 290 TCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 469
+C+ GG R +A+ LERG IV+ TPGRL D L +G NL R +VLDEAD MLD+GF
Sbjct: 150 SCI-GGMDARREAQALERGCHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEADEMLDLGF 208
Query: 470 EPQIRKIIEQIRPTDR 517
++ +I++ P +R
Sbjct: 209 RDELEEILD-ATPAER 223
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILP-AIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTGSGKT+AY L A + + + P+AL++APTRELA
Sbjct: 88 QTGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELA 130
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
+ G ++ V+G AP Q ++L++ +V+ TPGR+ID +EKGT + + YLV+D
Sbjct: 94 NIGRFKRLKVAAVYGKAPFYHQEKELKQKTHVVVGTPGRIIDHMEKGTFDTSQIKYLVID 153
Query: 440 EADRMLDMGFEPQIRKIIEQI 502
EAD M +MGF QI II+ +
Sbjct: 154 EADEMFNMGFVDQIETIIKDL 174
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ ++QTGSGKT A+ +P ++ + P ALVL PTRELA
Sbjct: 42 KDIIVKSQTGSGKTAAFAIPICQLVDWDE-----NKPQALVLVPTRELA 85
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/90 (41%), Positives = 53/90 (58%)
Frame = +2
Query: 248 ASSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 427
A + G +R FGG +QA+ L V+I +ATPGRL+D+ + NL+ +
Sbjct: 207 ADAEGLGKYCDIRVETFFGGMDFDKQAQILRGRVDIAVATPGRLMDYHRRKMINLREVEF 266
Query: 428 LVLDEADRMLDMGFEPQIRKIIEQIRPTDR 517
L +DEADRMLDMGF P +RKI+ + D+
Sbjct: 267 LCIDEADRMLDMGFIPDVRKIVGYLPGRDK 296
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELA 236
+ QTG+GKT A+++ H N P G P AL+LAPTRELA
Sbjct: 158 KAQTGTGKTAAFLISMYNHFVNNPQTEVKAGTPRALILAPTRELA 202
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +2
Query: 257 ADF---GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTY 427
ADF G++ ++ CV+GG P REQ L G ++VI TPGR+ D LE+ T + + +
Sbjct: 180 ADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCDVVIGTPGRMKDHLERKTLMMDKLKF 239
Query: 428 LVLDEADRMLDMGFEPQIRKIIE 496
VLDEAD ML+MGF + I++
Sbjct: 240 RVLDEADEMLNMGFVDDVELILK 262
Score = 43.2 bits (97), Expect = 0.006
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = +3
Query: 24 KDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPI----RRG 191
+ G A + L + K+ R +TG GKTLA++LP + + P+ RR
Sbjct: 99 RKKGFDALFAIQAETLEIALSGKDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRV 158
Query: 192 DG--PIALVLAPTRELA 236
G P+ +VLAPTRELA
Sbjct: 159 QGRRPMCVVLAPTRELA 175
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
++GG P Q R L+ V++VI TPGR+ID +++GT +L T +LDEAD+MLDMGF
Sbjct: 108 IYGGQPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFRE 167
Query: 476 QIRKIIEQIRPTDR 517
I I P DR
Sbjct: 168 DIEDIFRD-TPKDR 180
Score = 37.1 bits (82), Expect = 0.40
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 105
E+ Q + MG++EPTPIQA P + GK++ G
Sbjct: 15 ELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTG 47
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 90 KEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
K+ + + QTG+GKT A+ +P I ++ P + ALVL+PTRELA
Sbjct: 43 KDVTGQAQTGTGKTAAFGIPIIERLD--PDNKNVQ---ALVLSPTRELA 86
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/60 (51%), Positives = 43/60 (71%)
Frame = +2
Query: 341 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPTDRL 520
RGV IV+ TPGRL+D +E+ N +C YLV+DEADRM+DMGFE + K+I + ++L
Sbjct: 317 RGVHIVVGTPGRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLINLLPKNEKL 376
Score = 41.5 bits (93), Expect = 0.019
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 7/49 (14%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHIN-------NQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LP + +++ N +R + P+ALVLAPTRELA
Sbjct: 230 ETGSGKTLAFLLPLLHYLSRVDGNYLNYEKVR--NEPLALVLAPTRELA 276
Score = 32.7 bits (71), Expect = 8.6
Identities = 11/34 (32%), Positives = 24/34 (70%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ +K+ G+++PTP+Q PI++ +++VGV
Sbjct: 195 KILASLKSFGFRQPTPVQRASIPISLELRDVVGV 228
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
+R C GG P + Q +L G EIV+A PGRL D L + L +C ++VLDEAD+M+D
Sbjct: 281 LRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRLKDLLNQSYLVLGQCYFVVLDEADKMID 340
Query: 461 MGFEPQIRKIIEQI 502
+G + Q+R I ++
Sbjct: 341 LGLDVQVRYIFSEL 354
Score = 46.0 bits (104), Expect = 9e-04
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELA 236
+TG+GKT AY++P I + P + GP ALVLAPTRELA
Sbjct: 221 ETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELA 265
Score = 39.1 bits (87), Expect = 0.099
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 481 QKNH*ANTPNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVK- 657
++N N R TLM+SAT P ++K+ +YL I I+IG + N+ Q ++V+
Sbjct: 370 KENASGNPSTRTTLMYSATMPSTLEKITNEYLRRPITISIGKTG-NVAENVKQNILWVED 428
Query: 658 NMKKK 672
NMKK+
Sbjct: 429 NMKKR 433
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +2
Query: 266 GHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEA 445
GH +++ V+GG R Q L RGV++V+ TPGR++D + +GT + T LVLDEA
Sbjct: 165 GHP-HLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEA 223
Query: 446 DRMLDMGFEPQIRKIIEQIRPTDR 517
D ML MGF + I+EQ+ P +R
Sbjct: 224 DEMLRMGFIDDVEWILEQL-PKER 246
Score = 36.7 bits (81), Expect = 0.53
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 27 DNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 206
D G + + + ++ + QTG+GKT A+ LP + + + P
Sbjct: 88 DKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKT-----PQV 142
Query: 207 LVLAPTRELA 236
LVLAPTRELA
Sbjct: 143 LVLAPTRELA 152
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
VFGGA Q RD+ RG +I++ATPGRL+D +++ L Y+VLDEAD ML+MGF+
Sbjct: 117 VFGGANIMNQIRDIRRGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKE 176
Query: 476 QIRKIIEQ 499
I I+ +
Sbjct: 177 DIDFILSK 184
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 93 EFSWRTQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAXXXXXXXXXXD 269
+F QTG+GKT A+ LP + I+ N ++ AL+LAPTRELA
Sbjct: 53 DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQ------ALILAPTRELAQQICGQMEQMS 106
Query: 270 THL 278
HL
Sbjct: 107 KHL 109
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V+GG+P Q L+RG ++V+ TPGR+ID +EKG +L LVLDEAD ML MGF
Sbjct: 148 VYGGSPYGPQIGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAE 207
Query: 476 QIRKIIEQIRPTDRL 520
+ I P DRL
Sbjct: 208 DVETIASS-APDDRL 221
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +2
Query: 251 SSADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 430
S ++G +++T VFGG Q L RG +I+IATPGR++D + + L
Sbjct: 96 SVKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIATPGRMMDLYNQKAVRFDKLEVL 155
Query: 431 VLDEADRMLDMGFEPQIRKII 493
VLDEADRMLDMGF I+KI+
Sbjct: 156 VLDEADRMLDMGFIHDIKKIL 176
Score = 35.1 bits (77), Expect = 1.6
Identities = 25/91 (27%), Positives = 39/91 (42%)
Frame = +3
Query: 24 KDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 203
+D G A + + ++ QTG+GKT + LP ++ I ++ + +
Sbjct: 21 EDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLP-LLEILSKGENAQSNQVR 79
Query: 204 ALVLAPTRELAXXXXXXXXXXDTHLMFVTRV 296
ALVL PTRELA HL + V
Sbjct: 80 ALVLTPTRELAAQVAESVKNYGQHLSLKSTV 110
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
++GG P Q L +G ++V+ TPGRL+D ++G L + LVLDEAD MLD+GF P
Sbjct: 122 IYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLDLGFLP 181
Query: 476 QIRKIIEQIRPT 511
I +I+ Q T
Sbjct: 182 DIERILRQTPDT 193
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 27 DNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 206
+ G+ + A L + + + +TG GKT A+ +P + + P A
Sbjct: 27 EEGIHQPFAIQELTLPMALAGDDLIGQARTGMGKTYAFGVPLLQRVTTDTEKELSGIPRA 86
Query: 207 LVLAPTREL 233
L++ PTREL
Sbjct: 87 LIVVPTREL 95
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMG 466
V+GG+ Q + L++GVEI++ TPGR+ID L TNL R +++VLDEADR+LD+G
Sbjct: 830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889
Query: 467 FEPQIRKIIEQIR 505
FE QI I+ R
Sbjct: 890 FESQIYNILRNCR 902
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+
Sbjct: 768 ETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELS 809
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
V+ V+GG Q L RGV +++ATPGRLID +E+GT +L + +VLDEAD ML+
Sbjct: 100 VKVLAVYGGQSIGNQIAQLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLN 159
Query: 461 MGFEPQIRKIIEQI 502
MGF I +I+ +
Sbjct: 160 MGFIDDIERILSHV 173
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 73.3 bits (172), Expect = 5e-12
Identities = 42/122 (34%), Positives = 62/122 (50%)
Frame = +2
Query: 137 LHLASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPK 316
L L H +QP A R L + ++ + D+ +R+ VFGG
Sbjct: 57 LPLLQHLITRQPHAKGRRPVRALI-LTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115
Query: 317 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 496
Q L GV++++ATPGRL+D + L + LVLDEADRMLDMGF IR+++
Sbjct: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 175
Query: 497 QI 502
++
Sbjct: 176 KL 177
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELA 236
QTG+GKT + LP + H+ + P +G P+ AL+L PTRELA
Sbjct: 46 QTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELA 88
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
++ + V GY+EPTPIQ Q P + G++L+
Sbjct: 11 DILRAVAEQGYREPTPIQQQAIPAVLEGRDLM 42
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = +2
Query: 302 GGAPKREQARDLE-RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQ 478
GG +Q + LE R +I++ATPGRL+DF ++G +L +VLDEADRMLDMGF PQ
Sbjct: 120 GGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQ 179
Query: 479 IRKIIEQ 499
+R+II Q
Sbjct: 180 VRQIIRQ 186
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVH-INNQPPIRRGDG-PIALVLAPTREL 233
R QTG+GKT A+++ I + PP R G P AL++APTREL
Sbjct: 52 RAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTREL 96
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 72.9 bits (171), Expect = 7e-12
Identities = 51/140 (36%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Frame = +2
Query: 167 QPTAYSER*WSDCFGLGAYQRVSTTNSASSADFGHTSYVRNTCVFGGAPKREQARDLERG 346
QP ER L + ++ A + + Y ++ CV+GG ++ Q +ERG
Sbjct: 140 QPVPKCERNGPGMLVLTPTRELALQVDAECKKYSYKDY-KSVCVYGGGDRKAQIHKVERG 198
Query: 347 VEIVIATPGRLIDFLEKGTTNLQRCTYL--------------------------VLDEAD 448
V+IVIATPGRL D NL+ TYL VLDEAD
Sbjct: 199 VDIVIATPGRLHDLQMNKLINLRSITYLVSCLHVFVFKMWDSRLRSVRLFLCNKVLDEAD 258
Query: 449 RMLDMGFEPQIRKIIEQIRP 508
RMLD+GFEPQI KI+ +RP
Sbjct: 259 RMLDLGFEPQIMKILLDVRP 278
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/43 (62%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELA 236
QTG+GKTLAY+LP +H+N QP P +GP LVL PTRELA
Sbjct: 120 QTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELA 162
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKK 672
P+RQT+M SATWP V+++A YL D + + +GSL L+A ++ Q + V +KK
Sbjct: 278 PDRQTVMTSATWPASVRRMATSYLKDPMMVYVGSLDLTAVSSVQQKILIVSAEEKK 333
Score = 43.2 bits (97), Expect = 0.006
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
E+ VK G+ PTPIQ+Q WP+ +SG +L+ +
Sbjct: 85 EIMDNVKHAGFVNPTPIQSQAWPVLLSGDDLIAI 118
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
+FGG Q R LE GV+I++ATPGRL + +E G ++ +LV DEADR+LDMGF
Sbjct: 108 IFGGRKMSSQERMLENGVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFIN 167
Query: 476 QIRKIIEQIRPTDRL 520
+RKI+ + ++
Sbjct: 168 AVRKIMLDVETNPQI 182
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKT A+ LP I + AL+ APTRELA
Sbjct: 46 QTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELA 87
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEP 475
V GG +R Q + + G +V+ATPGRL D++ + +L + LVLDEADRM+DMGF P
Sbjct: 130 VMGGTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLP 189
Query: 476 QIRKIIEQIRPTDR 517
I++I+ + P D+
Sbjct: 190 AIKRILRAL-PRDK 202
Score = 40.7 bits (91), Expect = 0.032
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
QTG+GKTLA+I+PA+ + + P G L+L PTRELA
Sbjct: 72 QTGTGKTLAFIIPALEMLRDTEPC----GVQVLILVPTRELA 109
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 72.9 bits (171), Expect = 7e-12
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
V+ VFGG Q +L G +IV+ATPGRL+D LE + + LVLDEADR+LD
Sbjct: 108 VKVAVVFGGVSINPQMMNLRGGADIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLD 167
Query: 461 MGFEPQIRKIIEQIRP 508
+GF ++ +I+E + P
Sbjct: 168 LGFGEELGRILELLPP 183
Score = 39.1 bits (87), Expect = 0.099
Identities = 24/70 (34%), Positives = 33/70 (47%)
Frame = +3
Query: 27 DNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 206
D G + A S + + ++ QTGSGKT A+ LP + + N P
Sbjct: 22 DKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLAN-APTGTPRPTRG 80
Query: 207 LVLAPTRELA 236
L+L PTRELA
Sbjct: 81 LILVPTRELA 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,313,457
Number of Sequences: 1657284
Number of extensions: 15834132
Number of successful extensions: 42442
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 38105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41524
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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