Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060090.seq
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 138 5e-33
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 96 2e-20
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 95 5e-20
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 94 7e-20
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 94 7e-20
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 94 7e-20
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 91 5e-19
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 89 4e-18
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 89 4e-18
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 87 1e-17
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 64 7e-11
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 64 7e-11
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 62 5e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 62 5e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 62 5e-10
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 62 5e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 61 8e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 61 8e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 61 8e-10
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 60 1e-09
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 60 1e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 60 1e-09
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 60 2e-09
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 58 4e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 54 7e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 54 7e-08
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 54 1e-07
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 51 7e-07
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 51 7e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 48 5e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 44 1e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 41 0.001
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 37 0.015
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 37 0.015
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 36 0.036
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 35 0.062
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 33 0.25
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.58
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 9.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 9.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 138 bits (333), Expect = 5e-33
Identities = 66/103 (64%), Positives = 81/103 (78%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 433
S DF H+ ++ TC+FGGA K QARDLERGV+IV+ATPGRL+DFL+ GTTN+++C+YLV
Sbjct: 222 SIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLV 281
Query: 434 LDEADRMLDMGFEPQIRKIIEQIRPTDRL*CGQLLGPKK*RNL 562
LDEADRMLDMGFEPQI+KII QIRP + PK+ R L
Sbjct: 282 LDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRAL 324
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL 642
P+RQTLM+SATWPKEV+ LA D+ D +N+GSL+L+ANHNI Q+
Sbjct: 306 PDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQV 351
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELA
Sbjct: 174 KTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELA 215
Score = 35.5 bits (78), Expect = 0.036
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +1
Query: 37 YKEPTPIQAQGWPIAMSGKNLVGVLK 114
+++PT IQ+ WPIAMSG++++ + K
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAK 174
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
FG ++ V GGA + +Q L GVE+VIATPGRL+D LE L +CTY++LDE
Sbjct: 401 FGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDE 460
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTD 514
ADRMLDMGFEP ++K++E + T+
Sbjct: 461 ADRMLDMGFEPDVQKVLEYMPDTN 484
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELA 236
+TGSGKT A++LP +V I + P + R + GP A+++APTRELA
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +1
Query: 7 EVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
EV Q VK +GY EPTPIQ Q PI + ++++GV
Sbjct: 311 EVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 606
RQT+M++AT +++LA YL ++IGS
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGS 540
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 94.7 bits (225), Expect = 5e-20
Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDM 463
C +GG EQ DL+RG EIV+ TPGR+ID L + TNL+R TYLVLDEADRM D
Sbjct: 410 CTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDK 469
Query: 464 GFEPQIRKIIEQIRP 508
GFEPQI K++ IRP
Sbjct: 470 GFEPQIMKVVNNIRP 484
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELA 390
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK 114
+K Y +PT IQAQ P MSG++++G+ K
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAK 349
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 603
P++QT+++SAT+P+ ++ LA L ++I +G
Sbjct: 484 PDKQTVLFSATFPRHMEALARKVLDKPVEILVG 516
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 94.3 bits (224), Expect = 7e-20
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C YLVLD
Sbjct: 245 FSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLD 304
Query: 440 EADRMLDMGFEPQIRKIIEQIRP 508
EADRMLDMGFEPQIRKI+ Q P
Sbjct: 305 EADRMLDMGFEPQIRKIVGQGMP 327
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
R T M+SAT+PKE++ LA+D+L D YI + +G + S + NI Q ++V M+K+ N
Sbjct: 332 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSN 387
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 10/52 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 236
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 235
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
V + V GY +PTP+Q P ++ ++L+
Sbjct: 150 VMENVNRSGYSKPTPVQKHSIPTLLANRDLM 180
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 94.3 bits (224), Expect = 7e-20
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C YLVLD
Sbjct: 229 FSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLD 288
Query: 440 EADRMLDMGFEPQIRKIIEQIRP 508
EADRMLDMGFEPQIRKI+ Q P
Sbjct: 289 EADRMLDMGFEPQIRKIVGQGMP 311
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
R T M+SAT+PKE++ LA+D+L D YI + +G + S + NI Q ++V M+K+ N
Sbjct: 316 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSN 371
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 10/52 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 236
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 219
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
V + V GY +PTP+Q P ++ ++L+
Sbjct: 134 VMENVNRSGYSKPTPVQKHSIPTLLANRDLM 164
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 94.3 bits (224), Expect = 7e-20
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
F + S ++ ++GG R+Q L G I+IATPGRLID +E+G L C YLVLD
Sbjct: 226 FSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLD 285
Query: 440 EADRMLDMGFEPQIRKIIEQIRP 508
EADRMLDMGFEPQIRKI+ Q P
Sbjct: 286 EADRMLDMGFEPQIRKIVGQGMP 308
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
R T M+SAT+PKE++ LA+D+L D YI + +G + S + NI Q ++V M+K+ N
Sbjct: 313 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSN 368
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 10/52 (19%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELA 236
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELA 216
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
V + V GY +PTP+Q P ++ ++L+
Sbjct: 131 VMENVNRSGYSKPTPVQKHSIPTLLANRDLM 161
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 91.5 bits (217), Expect = 5e-19
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
+ + Y ++ C++GG + EQ GVEIVIATPGRL D G +L TY+VLDE
Sbjct: 186 YSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDE 244
Query: 443 ADRMLDMGFEPQIRKIIEQIRPTDRL 520
ADRMLDMGFE IR+I+ +IRP DRL
Sbjct: 245 ADRMLDMGFEVAIRRILFEIRP-DRL 269
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 6/49 (12%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELA 236
+QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELA
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELA 176
Score = 38.3 bits (85), Expect = 0.005
Identities = 12/29 (41%), Positives = 24/29 (82%)
Frame = +1
Query: 22 VKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
++ G+++P+PIQ+Q WP+ +SG++ +GV
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGV 127
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +1
Query: 505 PNRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFV 654
P+R + SATWP+ V+KL + Y + + GSL L++ ++ Q FV
Sbjct: 266 PDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFV 315
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 88.6 bits (210), Expect = 4e-18
Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +2
Query: 293 CVFGGAPKREQARDLER-GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGF 469
C +GG K EQ+ +L+ G E+V+ TPGR+ID ++ G TN R T+LV DEADRM DMGF
Sbjct: 371 CAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGF 430
Query: 470 EPQIRKIIEQIRP 508
E Q++ I + +RP
Sbjct: 431 EAQVKSISDHVRP 443
Score = 64.1 bits (149), Expect = 9e-11
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELA 351
Score = 50.4 bits (115), Expect = 1e-06
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 7/230 (3%)
Frame = +1
Query: 10 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVLK----RVPAKRWPTSCQPLCT*TTNR 177
+ + ++ Y++PTPIQA P A+SG++++G+ K + A WP +
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 178 LFGEVMVRLLWSWRLPES*HNKFSKFCRFWT-HILCS*HVCVWWCS*KRASPGLGEGSRN 354
G V V ++ + L + KFC+ + + +C+ W ++++ EG+
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKW---EQSNELQNEGAEM 392
Query: 355 SHCYSR*IN*FLGKGHNQL--TAVHIFSS**G*SYVGYGI*TTNQKNH*ANTPNRQTLMW 528
C I + G T +F +G+ + +H P+RQ LM+
Sbjct: 393 VVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDH--VRPDRQCLMF 450
Query: 529 SATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKIN 678
SAT+ ++V++LA D L D ++I G + AN +I Q ++N K++
Sbjct: 451 SATFKQKVERLARDALVDPVRIVQGEVG-EANADIEQKVFVMQNQDVKLH 499
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +2
Query: 254 SADFGHTSYVRNTCVFGGAPK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYL 430
S F + + + + ++GG ++Q L G I+IATPGRLID +++G ++ C YL
Sbjct: 270 SRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYL 329
Query: 431 VLDEADRMLDMGFEPQIRKIIE 496
VLDEADRMLDMGFEPQIR+I+E
Sbjct: 330 VLDEADRMLDMGFEPQIRQIVE 351
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/55 (38%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQL*IFVKNMKKK 672
R T M+SAT+PKE++ LA+D+L + Y+ + +G + S + NI+Q ++V+ +K+
Sbjct: 361 RITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVG-STSENIMQKIVWVEEDEKR 414
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 4 HE-VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 102
HE +++ +KT GY PTP+Q P G++L+
Sbjct: 174 HEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLM 207
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELA 236
QTGSGKT A+++P + I P R+ P ALVL+PTREL+
Sbjct: 211 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 86.6 bits (205), Expect = 1e-17
Identities = 41/66 (62%), Positives = 49/66 (74%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 472
C+ GG P EQA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMGFE
Sbjct: 306 CI-GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFE 364
Query: 473 PQIRKI 490
+I+ I
Sbjct: 365 DEIKSI 370
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELA 236
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELA 279
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKKKI 675
RQTL++SAT P++++ A+ L I +N+G +A+ N+LQ FV++ K +
Sbjct: 378 RQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAG-AASLNVLQELEFVRSENKLV 431
Score = 34.3 bits (75), Expect = 0.082
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 25 KTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
K G PT IQ QG P+A+SG++++G+
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGI 233
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + S + V+GG + +G I++ T GR+ F E G L +C YLVLDE
Sbjct: 398 FSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDE 457
Query: 443 ADRMLD-MGFEPQIRKII 493
ADRM+D MGF P+I +II
Sbjct: 458 ADRMIDSMGFGPEIEQII 475
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELA 236
QTGSGKT A++LP + + + + G +G P ++L PTRELA
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 478 NQKNH*ANTPNRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQ 639
N KN N RQT+M+SAT+P V++ A L DY I I + +AN ++Q
Sbjct: 476 NYKNMPKND-KRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIG-AANKCVIQ 528
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + S + V+GG + +G I++ T GR+ F E G L +C YLVLDE
Sbjct: 398 FSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDE 457
Query: 443 ADRMLD-MGFEPQIRKII 493
ADRM+D MGF P+I +II
Sbjct: 458 ADRMIDSMGFGPEIEQII 475
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELA 236
QTGSGKT A++LP + + + + G +G P ++L PTRELA
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELA 388
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 478 NQKNH*ANTPNRQTLMWSATWPKEVKKLAEDYL-GDYIQINIGSLQLSANHNILQ 639
N KN N RQT+M+SAT+P V++ A L DY I I + +AN ++Q
Sbjct: 476 NYKNMPKND-KRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIG-AANKCVIQ 528
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGF 469
+ GG QA L R I++ATPGRL+D LE KG NL+ +L++DEADR+L+M F
Sbjct: 146 IVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGF-NLKALKFLIMDEADRILNMDF 204
Query: 470 EPQIRKIIEQIRPTDR 517
E ++ KI++ I P +R
Sbjct: 205 EVELDKILKVI-PRER 219
Score = 34.3 bits (75), Expect = 0.082
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 21 CKDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGP 200
C+ G + + L + K+ +TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 201 IALVLAPTRELA 236
LVL PTRELA
Sbjct: 114 FCLVLTPTRELA 125
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + + V+GG +E+G I++ T GR+ F E+GT L +C + VLDE
Sbjct: 441 FAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
Query: 443 ADRMLD-MGFEPQIRKII 493
ADRM+D MGF I I+
Sbjct: 501 ADRMIDAMGFGTDIETIV 518
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 236
QTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQ 639
NRQTLM+SAT+P V++ A +L + Y+ I I + +AN +LQ
Sbjct: 528 NRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIG-AANKCVLQ 571
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + + V+GG +E+G I++ T GR+ F E+GT L +C + VLDE
Sbjct: 441 FAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
Query: 443 ADRMLD-MGFEPQIRKII 493
ADRM+D MGF I I+
Sbjct: 501 ADRMIDAMGFGTDIETIV 518
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 236
QTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQ 639
NRQTLM+SAT+P V++ A +L + Y+ I I + +AN +LQ
Sbjct: 528 NRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIG-AANKCVLQ 571
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + + V+GG +E+G I++ T GR+ F E+GT L +C + VLDE
Sbjct: 441 FAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 500
Query: 443 ADRMLD-MGFEPQIRKII 493
ADRM+D MGF I I+
Sbjct: 501 ADRMIDAMGFGTDIETIV 518
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELA 236
QTGSGKT A++LP + + + + G+G P ++L PTRELA
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELA 431
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQ 639
NRQTLM+SAT+P V++ A +L + Y+ I I + +AN +LQ
Sbjct: 528 NRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIG-AANKCVLQ 571
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +2
Query: 302 GGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQI 481
GG R+ L V +VIATPGR++D +EKG ++ C LVLDEAD++L F+ +
Sbjct: 147 GGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGIL 206
Query: 482 RKIIEQIRPTDR 517
++I + P +R
Sbjct: 207 DRLINFL-PKER 217
Score = 34.3 bits (75), Expect = 0.082
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +3
Query: 27 DNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 206
+ G ++ + + + ++ R + G+GKT AY +P I I QP ++ A
Sbjct: 60 EKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---A 114
Query: 207 LVLAPTRELA 236
+V+ PTRELA
Sbjct: 115 MVIVPTRELA 124
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + + V+GG +E+G I++ T GR+ F E+GT L +C + VLDE
Sbjct: 652 FAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
Query: 443 ADRMLD-MGFEPQIRKII 493
ADRM+D MGF I I+
Sbjct: 712 ADRMIDAMGFGTDIDTIV 729
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 233
QTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQ 639
NRQTLM+SAT+P V++ A ++L + YI + I + +AN +LQ
Sbjct: 739 NRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIG-AANKCVLQ 782
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + + V+GG +E+G I++ T GR+ F E+GT L +C + VLDE
Sbjct: 652 FAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
Query: 443 ADRMLD-MGFEPQIRKII 493
ADRM+D MGF I I+
Sbjct: 712 ADRMIDAMGFGTDIDTIV 729
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 233
QTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQ 639
NRQTLM+SAT+P V++ A ++L + YI + I + +AN +LQ
Sbjct: 739 NRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIG-AANKCVLQ 782
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 263 FGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDE 442
F + + + V+GG +E+G I++ T GR+ F E+GT L +C + VLDE
Sbjct: 652 FAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDE 711
Query: 443 ADRMLD-MGFEPQIRKII 493
ADRM+D MGF I I+
Sbjct: 712 ADRMIDAMGFGTDIDTIV 729
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTREL 233
QTGSGKT A++LP + + ++ + G+G P ++L PTREL
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTREL 641
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGD-YIQINIGSLQLSANHNILQ 639
NRQTLM+SAT+P V++ A ++L + YI + I + +AN +LQ
Sbjct: 739 NRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIG-AANKCVLQ 782
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 472
C+ GG R+ R LE G+ +V+ TPGR+ D + + + R VLDEAD ML GF+
Sbjct: 131 CI-GGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFK 189
Query: 473 PQIRKIIEQIRPTD 514
QI ++ + P D
Sbjct: 190 DQIYEVFRSM-PQD 202
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 33 GLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 212
G ++ A + K+ + Q+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 213 LAPTRELA 236
+APTRELA
Sbjct: 103 MAPTRELA 110
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +2
Query: 293 CVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFE 472
C+ GG R+ R LE G+ +V+ TPGR+ D + + + R VLDEAD ML GF+
Sbjct: 131 CI-GGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFK 189
Query: 473 PQIRKIIEQIRPTD 514
QI ++ + P D
Sbjct: 190 DQIYEVFRSM-PQD 202
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 33 GLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 212
G ++ A + K+ + Q+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 213 LAPTRELA 236
+APTRELA
Sbjct: 103 MAPTRELA 110
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/70 (40%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGFE 472
V GG+ + + L +GV I++ATPGRL+D L+ L R L++DEADR+LD+GFE
Sbjct: 174 VMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFE 233
Query: 473 PQIRKIIEQI 502
++++++ +
Sbjct: 234 IEMQQVLRHL 243
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/42 (42%), Positives = 32/42 (76%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+
Sbjct: 113 KTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELS 153
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
+ G + +R C+ GG EQ + +I++ATPGRL+ + + L Y+V D
Sbjct: 115 ELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFD 174
Query: 440 EADRMLDMGFEPQIRKIIEQI 502
EADR+ +MGF+ Q+ + +++I
Sbjct: 175 EADRLFEMGFQDQLTETLKRI 195
Score = 34.7 bits (76), Expect = 0.062
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
H V + ++ G+ +PTPIQ + P M GK++V +
Sbjct: 33 HSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAM 67
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
++TGSGKT A+++P + + R G AL+++PTRELA
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELA 106
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 260 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 439
+ G + +R C+ GG EQ + +I++ATPGRL+ + + L Y+V D
Sbjct: 115 ELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFD 174
Query: 440 EADRMLDMGFEPQIRKIIEQI 502
EADR+ +MGF+ Q+ + +++I
Sbjct: 175 EADRLFEMGFQDQLTETLKRI 195
Score = 34.7 bits (76), Expect = 0.062
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 108
H V + ++ G+ +PTPIQ + P M GK++V +
Sbjct: 33 HSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAM 67
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +3
Query: 108 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
++TGSGKT A+++P + + R G AL+++PTRELA
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELA 106
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 58.4 bits (135), Expect = 4e-09
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Frame = +2
Query: 194 WSDCFGLGAYQRVSTTNSASSADFGHTSYVRN----TC--VFGGAPKREQARDLERGVEI 355
WS +GLGA +S T + F + V +C V GG+ + R+ G+ I
Sbjct: 143 WSPDYGLGALI-ISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINI 200
Query: 356 VIATPGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPTDR 517
++ TPGRL+ + E + LVLDEADRMLDMGF Q+ II + P +R
Sbjct: 201 IVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNL-PAER 254
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +3
Query: 24 KDNGLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 203
KDN + +A S + +TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 204 ALVLAPTRELA 236
AL+++PTRELA
Sbjct: 151 ALIISPTRELA 161
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDM 463
+ GG QAR+L +V+ATPGRL D +E + ++ + VLDEADRML+
Sbjct: 191 IVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEG 250
Query: 464 GFEPQIRKIIEQI 502
+ Q++ I E I
Sbjct: 251 QYNDQLKPIFESI 263
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TG+GKTLA+ +P + ++ P G AL+L PTRELA
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELA 170
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = +2
Query: 296 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDM 463
+ GG QAR+L +V+ATPGRL D +E + ++ + VLDEADRML+
Sbjct: 191 IVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEG 250
Query: 464 GFEPQIRKIIEQI 502
+ Q++ I E I
Sbjct: 251 QYNDQLKPIFESI 263
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+TG+GKTLA+ +P + ++ P G AL+L PTRELA
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELA 170
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = +2
Query: 287 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 466
+ C+ GG E R L+ G +V TPGR+ D + + + LVLDEAD ML+ G
Sbjct: 126 HACI-GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKG 184
Query: 467 FEPQIRKIIEQIRP 508
F+ Q+ I + P
Sbjct: 185 FKEQLYDIYRYLPP 198
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ Q+G+GKT + + + ++ Q +R AL+L+PTRELA
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELA 107
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/74 (36%), Positives = 39/74 (52%)
Frame = +2
Query: 287 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 466
+ C+ GG E R L+ G +V TPGR+ D + + + LVLDEAD ML+ G
Sbjct: 126 HACI-GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKG 184
Query: 467 FEPQIRKIIEQIRP 508
F+ Q+ I + P
Sbjct: 185 FKEQLYDIYRYLPP 198
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 236
+ Q+G+GKT + + + ++ Q +R AL+L+PTRELA
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELA 107
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +2
Query: 299 FGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-F 469
FGG + + L + I++AT GRL DF+ G +L + Y+VLDEADRM+D F
Sbjct: 849 FGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDF 908
Query: 470 EPQIRKII 493
++ KII
Sbjct: 909 GEEVSKII 916
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTREL 233
TGSGKTLA+++P ++ + ++ P L++APTREL
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTREL 826
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +2
Query: 299 FGGAPKREQARDLER--GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-F 469
FGG + + L + I++AT GRL DF+ G +L + Y+VLDEADRM+D F
Sbjct: 849 FGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDF 908
Query: 470 EPQIRKII 493
++ KII
Sbjct: 909 GEEVSKII 916
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTREL 233
TGSGKTLA+++P ++ + ++ P L++APTREL
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTREL 826
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
R + GG+ + DL++ +IVI TPGR+ ++ G N+ + VLDEAD+++D
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMD 178
Query: 461 MGFEPQIRKIIEQI 502
F I II +
Sbjct: 179 EVFRDDINIIINSL 192
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 284 RNTCVFGGAPKREQARDLERG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD 460
R + GG+ + DL++ +IVI TPGR+ ++ G N+ + VLDEAD+++D
Sbjct: 119 RTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMD 178
Query: 461 MGFEPQIRKIIEQI 502
F I II +
Sbjct: 179 EVFRDDINIIINSL 192
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 299 FGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEP 475
+G + + ++ G +I+I T GR++DF K +L +LV DEADR+L DM +P
Sbjct: 494 YGQSDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDP 553
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Frame = +3
Query: 105 RTQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELA 236
+ +T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELA 472
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 281 VRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
V+ FGG A K+++ R IV+ TPGR++ G L + Y VLDE D+M+
Sbjct: 139 VKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
Query: 458 -DMGFEPQIRKIIE 496
D +++I++
Sbjct: 199 GDADMRRDVQEIVK 212
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 281 VRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
V+ FGG A K+++ R IV+ TPGR++ G L + Y VLDE D+M+
Sbjct: 139 VKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 198
Query: 458 -DMGFEPQIRKIIE 496
D +++I++
Sbjct: 199 GDADMRRDVQEIVK 212
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 502 TPN-RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
TP +Q +M+SAT PKE++ + + ++ D +++ + H + Q + +K +K
Sbjct: 214 TPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEK 270
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 VRNTCVFGG-APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
V+ FGG A K+++ R IV+ TPGR++ G L + Y VLDE D+M+
Sbjct: 138 VKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 197
Query: 458 DMGFEPQIRKIIEQIR 505
+ +R+ +++I+
Sbjct: 198 G---DADMRRDVQEIK 210
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = +1
Query: 511 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQL*IFVKNMKK 669
+Q +M+SAT PKE++ + + ++ D +++ + H + Q + +K +K
Sbjct: 210 KQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEK 262
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 335 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPT 511
LE +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI ++ PT
Sbjct: 143 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPT 201
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 335 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPT 511
LE +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI ++ PT
Sbjct: 210 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPT 268
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 33 GLQRTDAYSSSRLADSYVWKEFSWRTQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIAL 209
G ++ + S ++ + K R +TGSGKT A+++P + + + G GP A+
Sbjct: 108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAV 167
Query: 210 VLAPTREL 233
++APT+EL
Sbjct: 168 IIAPTKEL 175
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +2
Query: 341 RGVEIVIATPGRLIDFLEKGTTNLQR----CTYLVLDEADRMLDMGFEPQIRKIIEQI 502
+ V I++ATPGRL ++ T + R LV+DEADR ++ FE +R+I+ I
Sbjct: 130 KNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCI 187
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTREL 233
TGSGKTLA++LP + I N G AL+L+P+REL
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSREL 92
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Frame = +2
Query: 272 TSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTTNLQRCTY-----LV 433
T+ + T + GG + +Q R + ++ +IV+ATPGRL +++ T + LV
Sbjct: 94 TTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLV 153
Query: 434 LDEADRMLDMGFEPQIRKIIEQI 502
+DE DRM++ G+ ++ I+ +I
Sbjct: 154 VDETDRMVEEGYFAELTHILNKI 176
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTLA+ +P + + + + GP AL++APTREL
Sbjct: 34 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTREL 80
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Frame = +2
Query: 272 TSYVRNTCVFGGAPKREQARDL-ERGVEIVIATPGRLIDFLEKGTTNLQRCTY-----LV 433
T+ + T + GG + +Q R + ++ +IV+ATPGRL +++ T + LV
Sbjct: 261 TTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLV 320
Query: 434 LDEADRMLDMGFEPQIRKIIEQI 502
+DE DRM++ G+ ++ I+ +I
Sbjct: 321 VDETDRMVEEGYFAELTHILNKI 343
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Frame = +3
Query: 111 QTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTREL 233
+TGSGKTLA+ +P + + + + GP AL++APTREL
Sbjct: 201 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTREL 247
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 4 HEVQQGVKTMGYKEPTPIQAQGWPIAM 84
+EV + ++ MG+ EPT IQ+ P A+
Sbjct: 164 NEVLEAIEQMGFSEPTEIQSAVLPAAV 190
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 281 VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 457
+R + G + R LE G +IV+ TP R+ D + G + ++V+DE D+ L
Sbjct: 313 IRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIR 505
+I T G+L +E G L ++LDEAD+M+D F P I I++Q++
Sbjct: 125 DIAFCTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQLK 177
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIR 505
+I T G+L +E G L ++LDEAD+M+D F P I I++Q++
Sbjct: 225 DIAFCTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFGPDINWILDQLK 277
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.036
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Frame = +2
Query: 302 GGAPKREQARDLERGVEIVIATPGRLIDFLEKG-------------TTNL-------QRC 421
GG + Q L G ++V+ATPGRLID L T N+ + C
Sbjct: 255 GGLDLKAQEAALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKIC 314
Query: 422 -----TYLVLDEADRMLDMGFEPQIRKII 493
LVLDEADRML+ F Q+ ++I
Sbjct: 315 KIPNFQVLVLDEADRMLEEAFRDQMNELI 343
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAXXXXXXXXXXDTHLMFVTR 293
TG+GKT A++LP + + +P + LVL PTRELA T +
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVC 251
Query: 294 VC 299
+C
Sbjct: 252 LC 253
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 34 GYKEPTPIQAQGWPIAMSGKNL 99
GY +PTPIQ P+A++GK++
Sbjct: 167 GYSDPTPIQQACIPVALTGKDI 188
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 508 NRQTLMWSATWPKEVKKLAEDYLGDYIQINI 600
NRQTL++SAT +E+ +LA L ++I I
Sbjct: 349 NRQTLLFSATMTEEIDELASMSLQKPVKIFI 379
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 383 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPTD 514
DFL ++ R VLDEAD ML GF+ QI ++ + P D
Sbjct: 119 DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSM-PQD 161
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +3
Query: 114 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELA 236
TGSGKTLA+ LP I+ + + + +A+VL PTRELA
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELA 217
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKIIEQIR 505
+I T G+L +E T L ++LDE+D+M+D+ F I +++Q++
Sbjct: 224 DIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQ 276
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 114 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTREL 233
TG GKT A+++PAI + + +P I P L+LA T L
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSL 181
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 353 IVIATPGRLIDFLEKGTT---NLQRCTYLVLDEADRM 454
+++ATP RL+ L +L + +L++DEADRM
Sbjct: 243 VIVATPARLVQHLTSKIPPPIDLSKLRFLIVDEADRM 279
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVHINNQP 176
TGSGKT+ Y+LP + + ++P
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP 185
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 350 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 457
+IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 331 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 350 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 457
+IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 356 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 350 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 457
+IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 740 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 114 TGSGKTLAYILPAIVH 161
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 395 KGTTNLQRCTYLVLDEADRMLDMGFEPQIR 484
KG T + TY++ + D+++D+ EP ++
Sbjct: 2434 KGRTCEEPDTYIMFSDGDKIIDVAIEPDVK 2463
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 395 KGTTNLQRCTYLVLDEADRMLDMGFEPQIR 484
KG T + TY++ + D+++D+ EP ++
Sbjct: 2434 KGRTCEEPDTYIMFSDGDKIIDVAIEPDVK 2463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,172,340
Number of Sequences: 27780
Number of extensions: 383234
Number of successful extensions: 1199
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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