Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060089.seq
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 64 1e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 54 8e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 53 2e-07
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 53 2e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 5e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 42 5e-04
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 40 0.002
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 39 0.003
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 38 0.010
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 35 0.054
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 33 0.17
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 33 0.17
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 33 0.17
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 32 0.38
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 32 0.51
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 31 1.2
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 30 2.0
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 29 2.7
SB_19645| Best HMM Match : Smr (HMM E-Value=8.2) 29 3.6
SB_15074| Best HMM Match : PID (HMM E-Value=0.00012) 28 6.2
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 8.3
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/89 (34%), Positives = 46/89 (51%)
Frame = +3
Query: 249 PRWDSVSLQPFNKNFYDPHPTVLKRSPYEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPD 428
P + +PFNKNFY+ HP + K+S E++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 429 YVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
+ ++ + Y +PT IQ Q PIA+S R
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGR 555
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAADF 687
+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL Q I A F
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRF 613
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1
Query: 559 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVA 678
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQ +Q+VA
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVA 152
Score = 61.3 bits (142), Expect = 7e-10
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +3
Query: 321 RSPYEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 488
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 SVSLQPFNKNFYDPHPTVLKRSPYEVEXYRNNHE-VTVSGVEVXNPIQYFEEANFPDYVQ 437
+V QPF K+FY P + K +P E + +R + E + V G P++ + + +
Sbjct: 58 TVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKIL 117
Query: 438 QGVKTMGYKEPTPIQAQGWPIAMSER 515
+K Y++PTPIQAQ P+ MS R
Sbjct: 118 DVLKKNSYEKPTPIQAQAIPVIMSGR 143
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 547 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAADF 687
K +Y P + P I G IA+V+ PTRELA I + F
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKF 167
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXI 666
+TGSGKTLAY LP + + + P GD P+AL+L PTREL Q +
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 279 FNKNFYDPHPTVLKRSPYEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMG 458
F ++YD + V + S V+ R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 459 YKEPTPIQAQGWPIAMSER 515
++ PTPIQ Q MS R
Sbjct: 92 FQVPTPIQMQSLSCVMSGR 110
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQXIQQVAADF 687
+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQ I++ F
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKF 201
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +3
Query: 345 YRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + R
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNR 139
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +3
Query: 294 YDPHPTVLKRSPYEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPT 473
Y HPT+ + +V+ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 474 PIQAQGWPIAMSER 515
PIQ Q P+ +S R
Sbjct: 221 PIQMQVLPVLLSGR 234
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +3
Query: 333 EVEXYRNNHEVTVSGVEVXNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAADF 687
QTGSGKT AY+LP + + Q P+AL +APTRELA+ I A F
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKF 575
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 369 VSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
VSG I F E F + + + GY+ PTP+Q PI M+ R
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGR 517
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQXI 666
+TG+GKTL++ LP + + + + +RG P LV+APTRELA+ +
Sbjct: 118 RTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQV 163
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQXIQQV 675
Q+G+GKT + + + I+ + G D ALVLAPTRELAQ IQ+V
Sbjct: 130 QSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKV 178
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +3
Query: 360 EVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
EV VSG I FEEAN + V+ YK+PTP+Q PI ++ R
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 749
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + N P A+ +APTRELA I A F
Sbjct: 756 QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKF 811
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +3
Query: 360 EVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
EV VSG I FEEAN + V+ YK+PTP+Q PI ++ R
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 172
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 657
+TGSGKTLA+++P I + Q DG ALV++PTRELA
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELA 135
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAAD 684
+TGSGKTLA+++P +V + + + +G ++++PTREL+ VA D
Sbjct: 617 KTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARD 666
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQXIQQVA 678
QTGSGKTLAY+ P +VH + R G P A ++ P RELA I + A
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTA 475
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
Q+G+GKT + + + I+ Q +R P ALVL+PTRELA IQ+V
Sbjct: 42 QSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKV 84
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 35.1 bits (77), Expect = 0.054
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 657
+TGSGKT A+ LP + + + P G A+VL PTRELA
Sbjct: 52 KTGSGKTAAFALPILQKLCDDP-----YGIFAVVLTPTRELA 88
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQ 672
+TGSGKT A+ LP + + + P AL+L PTRELA I +
Sbjct: 9 ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISE 50
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQ 672
+TGSGKT A+++P + G AL+L+PTRELA Q+
Sbjct: 326 RTGSGKTAAFLIPMFEKLQTH---TAKVGIRALILSPTRELALQTQK 369
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 14/60 (23%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQXIQ 669
+TGSGKTLA+ +P I HI Q P +G +AL++APTRELA ++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 502 LCRKEFSWRXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAA 681
L ++ R + G+GKT AY++P + + + ALVL PTRELA Q+
Sbjct: 82 LAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICI 136
Query: 682 D 684
+
Sbjct: 137 E 137
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LAXS-NG 539
FE+ + G+ G+ +P+PIQ + P+A++ R LA + NG
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNG 94
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 502 LCRKEFSWRXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAA 681
L ++ R + G+GKT AY++P + + + ALVL PTRELA Q+
Sbjct: 82 LAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICI 136
Query: 682 D 684
+
Sbjct: 137 E 137
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSERI*LAXS-NG 539
FE+ + G+ G+ +P+PIQ + P+A++ R LA + NG
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNG 94
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 657
TG+GKT A++LP + + +P + LV+ PTRELA
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELA 94
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 396 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
I FE+ + + + V GYK+PTP+Q PI +R
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKR 913
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPP 600
QTGSGKT A+++P + I + P
Sbjct: 920 QTGSGKTAAFLIPILSRIYMEGP 942
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 526 RXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QXIQQVA 678
+ +TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q + +V+
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVS 246
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVA 678
Q+G+GKT A++L + ++ P P + L+PT ELA+ +VA
Sbjct: 150 QSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVA 193
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 357 HEVTVSGVEVXNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSE 512
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ +++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLAD 140
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 619 PIALVLAPTRELAQXIQQV 675
P ALVL+PTRELA IQ+V
Sbjct: 4 PQALVLSPTRELANQIQKV 22
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 538 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQXIQQVAAD 684
GSGK LAY+LP I I + +GP+ L+L + + V D
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCED 285
>SB_19645| Best HMM Match : Smr (HMM E-Value=8.2)
Length = 346
Score = 29.1 bits (62), Expect = 3.6
Identities = 31/97 (31%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Frame = +3
Query: 234 SEHASPRWDSVSLQPFNKNFYDPHPTVLKRSPYEVEXYRNNHEVTVSGVEVXNPIQ---- 401
SE AS S SLQ N N DP L R+ + R +VT ++ P Q
Sbjct: 239 SEGASLMKLSTSLQSLNTNIKDPRAAFLNRTKIKDLLVRTITKVTFLQQQIAQPRQLTLT 298
Query: 402 -YFEEANFPDYV----QQG--VKTMGYKEPTPIQAQG 491
YF E + DYV Q G + G P+P + G
Sbjct: 299 KYF-ETDSSDYVVELLQDGSAANSKGSDTPSPASSGG 334
>SB_15074| Best HMM Match : PID (HMM E-Value=0.00012)
Length = 1153
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 446 KDNGLQRTDAYSSSRLADSYVGKNLVGVXKRVPAKR 553
K +GL+R + S RLA +G +L K VP +R
Sbjct: 576 KGSGLERPKSLSLKRLASGSLGLHLAKFVKSVPVQR 611
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 241 CSDLQRILFSHQILQILQIYCHRC-QIETN 155
CS +L +IL+ +YC +C Q ETN
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 172 CQIETNYRRICCLLQIWN-HRFHGYYSS 92
C + +YRR CC L +W H + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,082,846
Number of Sequences: 59808
Number of extensions: 367223
Number of successful extensions: 965
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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