Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060089.seq
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 66 3e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 61 8e-10
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 45 4e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 45 4e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 45 4e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 42 6e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 40 0.001
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 39 0.003
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 39 0.003
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 39 0.003
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 39 0.004
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 39 0.004
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 39 0.004
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 38 0.005
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 38 0.005
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.007
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 38 0.007
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.007
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 36 0.021
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 36 0.021
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 36 0.027
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 36 0.027
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 36 0.036
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 36 0.036
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 34 0.11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 34 0.11
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.15
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.15
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 33 0.19
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 33 0.19
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.59
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 31 0.59
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 0.78
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 29 3.2
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.5
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 5.5
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 7.3
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 28 7.3
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 28 7.3
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 28 7.3
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 27 9.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAADF 687
+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQ +Q+V+ DF
Sbjct: 174 KTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +3
Query: 255 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPDYV 434
W + +L P K+FY + V +R YE++ + + ++VT+ G V P+ F EA P +
Sbjct: 82 WSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQI 141
Query: 435 QQGVKTMGYKEPTPIQAQGWPIAMSER 515
+ + +++PT IQ+ WPIAMS R
Sbjct: 142 HE-LLYGKFQKPTVIQSISWPIAMSGR 167
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/52 (55%), Positives = 40/52 (76%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAADF 687
+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA + Q A F
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKF 361
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQG 443
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 444 VKTMGYKEPTPIQAQGWPIAMSER 515
++ Y++PTPIQA P A+S R
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGR 303
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAADF 687
+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA + A F
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEXYRNNHE-VTVSGVEVXNPIQYFEEANFPDYVQQ 440
V + F KNFY + + + EV+ YR + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSER 515
+K Y +PT IQAQ P MS R
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.9 bits (141), Expect = 8e-10
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +3
Query: 345 YRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + R
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQXIQQVAADF 687
+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQ I++ F
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKF 401
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 6/52 (11%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQXIQ 669
QTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQ I+
Sbjct: 129 QTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 372 SGVEVXNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMS 509
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +S
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLS 120
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQXIQQVAA 681
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA I + A
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 682 DF 687
F
Sbjct: 244 KF 245
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQXIQQVAA 681
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA I + A
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 682 DF 687
F
Sbjct: 228 KF 229
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQXIQQVAA 681
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA I + A
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 682 DF 687
F
Sbjct: 225 KF 226
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 354 NHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQXI 666
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+ I
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQXIQQ 672
+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA I +
Sbjct: 426 ETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 363 VTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
V +G +V PI F + + +++++ +KT GY PTP+Q P R
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 11/56 (19%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQXI 666
QTGSGKT A+++P + I P R+ P ALVL+PTREL+ I
Sbjct: 211 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 511 KEFSWRXQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQXIQQV 675
K R +TGSGKT A+++P + + + G GP A+++APT+EL I ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + + + G+G P ++L PTRELA I F
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 330 YEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
++ E + E TV G++ P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 322 FDAEVKLTSSEKTV-GIK---PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + + + G+G P ++L PTRELA I F
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 330 YEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
++ E + E TV G++ P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 322 FDAEVKLTSSEKTV-GIK---PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + + + G+G P ++L PTRELA I F
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 330 YEVEXYRNNHEVTVSGVEVXNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
++ E + E TV G++ P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 322 FDAEVKLTSSEKTV-GIK---PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + ++ + G+G P ++L PTREL I F
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + ++ + G+G P ++L PTREL I F
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + ++ + G+G P ++L PTREL I F
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
F EAN + +++ V GY + TPIQ P+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAADF 687
TGSGKTLA++LP + I N G AL+L+P+REL I V F
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 511 KEFSWRXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
K+ + Q+G+GKT + + + I+++ P + ALV+APTRELAQ IQ+V
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKV 116
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 511 KEFSWRXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
K+ + Q+G+GKT + + + I+++ P + ALV+APTRELAQ IQ+V
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKV 116
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + + + G +G P ++L PTRELA I F
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F +++ P +++ V+ GY TPIQ P+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPL 331
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/51 (37%), Positives = 35/51 (68%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAAD 684
+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ V ++
Sbjct: 113 KTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQXIQQVAADF 687
QTGSGKT A++LP + + + + G +G P ++L PTRELA I F
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F +++ P +++ V+ GY TPIQ P+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPL 331
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QXIQQVAA 681
+TG+GKTLA+ +P + ++ P G AL+L PTRELA Q +Q A
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAEQFTA 179
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QXIQQVAA 681
+TG+GKTLA+ +P + ++ P G AL+L PTRELA Q +Q A
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAEQFTA 179
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +1
Query: 508 RKEFSWRXQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQXIQ 669
R++ +TGSGKTLA+ +P + + + + GP AL++APTREL I
Sbjct: 26 RQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIM 85
Query: 670 Q 672
+
Sbjct: 86 K 86
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +1
Query: 508 RKEFSWRXQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQXIQ 669
R++ +TGSGKTLA+ +P + + + + GP AL++APTREL I
Sbjct: 193 RQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIM 252
Query: 670 Q 672
+
Sbjct: 253 K 253
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 423 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
P+ V + ++ MG+ EPT IQ+ P A+ +R
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDR 193
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
TG+GKT A++LP + + +P + LVL PTRELA + QV
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 509
FE+ N + + GY +PTPIQ P+A++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALT 184
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 35.5 bits (78), Expect = 0.036
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +1
Query: 526 RXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQVAAD 684
R + G+GKT AY +P I I QP ++ A+V+ PTRELA Q+ +
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVE 133
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 657
+TGSGKT A+++P + + R G AL+++PTRELA
Sbjct: 69 RTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELA 106
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 657
+TGSGKT A+++P + + R G AL+++PTRELA
Sbjct: 69 RTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELA 106
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTREL 654
TGSGKTLA+++P ++ + ++ P L++APTREL
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTREL 826
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTREL 654
TGSGKTLA+++P ++ + ++ P L++APTREL
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTREL 826
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQ 672
+TGSGKT A+ +P + + + P LVL PTRELA I Q
Sbjct: 89 ETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
Q+G+GKT + + + ++ Q +R AL+L+PTRELA IQ+V
Sbjct: 71 QSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKV 113
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
Q+G+GKT + + + ++ Q +R AL+L+PTRELA IQ+V
Sbjct: 71 QSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKV 113
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +1
Query: 535 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELA 657
TGSGKTLA+ LP I+ + + + +A+VL PTRELA
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELA 217
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 107 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLEVRTCVAQMGFCFTPTFQQ 286
+ETV+ LE N +RL+ A VA E LE + GK N + A F T +
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLNPKFLARLTASGRFMETGYANE 130
Query: 287 KL 292
K+
Sbjct: 131 KI 132
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 657
+TGSGKTLA ++P ++ + G AL+++PTRELA
Sbjct: 121 KTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELA 161
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 478 FKLKAGR*LCRKEFSWRXQTGSGKTLAYILPAIVHINNQP 597
F++++ L ++ + TGSGKT+ Y+LP + + ++P
Sbjct: 146 FEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 467 TDAYSSSRLADSYVGKNLVGVXKRVPAKRWP 559
TDA R+A S++G+ L RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
Q+G+GKT A++L + I+ P + LAPT ELA+ I +V
Sbjct: 256 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 298
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
Q+G+GKT A++L + I+ P + LAPT ELA+ I +V
Sbjct: 281 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 323
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 532 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQXIQQV 675
Q+G+GKT A++L + I+ P + LAPT ELA+ I +V
Sbjct: 665 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 707
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVH 582
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +1
Query: 535 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQXI 666
TG GKT A+++PAI + + +P I P L+LA T L + +
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 159 RIIAEFVASSKFGTTVSTAIIPV 91
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 159 RIIAEFVASSKFGTTVSTAIIPV 91
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = -1
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIXNLNATYSYLVIISVXFDF 333
FR S+RP + +R+ F+ L L+H+ I + + +L IIS +
Sbjct: 223 FRKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QY 274
Query: 332 IW*SFENCRMWIIKVF 285
+W + C + I +F
Sbjct: 275 LWQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 235 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 134
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 6 RVKVDPASKRIHSLNKHLQLNPKXNHVW 89
R+ PAS ++H L++ LQLN + W
Sbjct: 768 RLAEQPASHQLHCLSRALQLNKANDSAW 795
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -1
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIXNLNATYSYLVIISVXFD 336
+R +YR N + + + Y + +I + F + + + NLN T +L I++ F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -1
Query: 512 FRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIXNLNATYSYLVIISVXFD 336
+R +YR N + + + Y + +I + F + + + NLN T +L I++ F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 316 RTVGCGS*KFLLKGWSETESHLGDACSDLQRILFSHQILQILQIYCHRCQ 167
RTV + L+ G+ E S L + D QR++ S +IL + C R Q
Sbjct: 78 RTVSFPADMDLITGYHEAPSSLFHSYHDSQRVIDSSEILTAYREACQRRQ 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,125,407
Number of Sequences: 27780
Number of extensions: 281609
Number of successful extensions: 854
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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