Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060088.seq
(663 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 124 1e-27
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 124 2e-27
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 108 1e-22
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 108 1e-22
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 106 5e-22
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 105 7e-22
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 105 1e-21
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 104 2e-21
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 102 7e-21
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 101 1e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 100 6e-20
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 98 2e-19
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 97 3e-19
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 90 4e-17
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 82 1e-14
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 81 3e-14
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 73 5e-12
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 56 6e-07
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 53 7e-06
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 48 2e-04
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.018
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 40 0.040
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 40 0.053
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 38 0.28
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 37 0.38
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.87
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 36 1.1
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.1
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 35 1.5
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.0
UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole ge... 34 2.7
UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 34 2.7
UniRef50_Q1DCK1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 6.1
UniRef50_UPI0000DB70F4 Cluster: PREDICTED: similar to scribbler ... 33 6.1
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 33 6.1
UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;... 33 8.1
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 124 bits (300), Expect = 1e-27
Identities = 57/100 (57%), Positives = 64/100 (64%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 433
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 434 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
++GH IE++P P + DKV+ K
Sbjct: 124 ICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKK 163
Score = 85.8 bits (203), Expect = 8e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 124 bits (299), Expect = 2e-27
Identities = 56/100 (56%), Positives = 67/100 (67%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 433
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 67 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYA 126
Query: 434 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
Q++GH+I+ + FP + D+VQ++ K
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQK 166
Score = 83.8 bits (198), Expect = 3e-15
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +3
Query: 57 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 236
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 237 AGHQTS 254
AGHQTS
Sbjct: 61 AGHQTS 66
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +1
Query: 505 SQLPLVVARQSPRDQQXPNRLVIFLRRLKAWSDIP*SVQSLSVFVPGKG 651
S+ PLVV+ + + Q+ + VIFLRRLK W+DI V F G+G
Sbjct: 151 SEFPLVVSDEVQKVQKT-KQAVIFLRRLKIWADIQ-KVYKSQRFRAGRG 197
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 108 bits (260), Expect = 1e-22
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 181 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +3
Query: 90 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTS
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTS 180
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 108 bits (259), Expect = 1e-22
Identities = 48/88 (54%), Positives = 53/88 (60%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 433
+ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 40 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQKRFA 99
Query: 434 XXXXXXXXXXXXXXQARGHIIEKIPSFP 517
ARGH + +P P
Sbjct: 100 TASALAASGSPALLMARGHNVSTVPEVP 127
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 106 bits (254), Expect = 5e-22
Identities = 53/121 (43%), Positives = 63/121 (52%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + Q G + +ESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGMQ-HSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 389 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINKXQTGL 568
RRWH ARGH I ++P P + DK++ K L
Sbjct: 110 RRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDAL 169
Query: 569 S 571
+
Sbjct: 170 N 170
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 105 bits (253), Expect = 7e-22
Identities = 50/107 (46%), Positives = 61/107 (57%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 427
+ +ESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 63 HSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKR 122
Query: 428 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINKXQTGL 568
ARGH I +P P + +++Q INK T +
Sbjct: 123 HAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAV 169
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 243 HQTS 254
HQ S
Sbjct: 61 HQHS 64
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 105 bits (251), Expect = 1e-21
Identities = 48/88 (54%), Positives = 53/88 (60%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 433
+ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 63 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFA 122
Query: 434 XXXXXXXXXXXXXXQARGHIIEKIPSFP 517
ARGH I ++ P
Sbjct: 123 TVSALAASGVPALLFARGHQISEVAEVP 150
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/61 (59%), Positives = 42/61 (68%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 251
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 252 S 254
S
Sbjct: 62 S 62
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 104 bits (249), Expect = 2e-21
Identities = 49/108 (45%), Positives = 60/108 (55%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 427
+ + SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 HSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKR 120
Query: 428 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINKXQTGLS 571
+RGH I +P P + D +Q K + ++
Sbjct: 121 FAVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMA 168
Score = 66.1 bits (154), Expect = 7e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 102 bits (245), Expect = 7e-21
Identities = 46/115 (40%), Positives = 65/115 (56%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + + G+ + + SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGYQTS-ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 389 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
RRWH +RGH IE + P + D +++INK
Sbjct: 108 RRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINK 162
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = +3
Query: 75 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 101 bits (243), Expect = 1e-20
Identities = 50/112 (44%), Positives = 59/112 (52%)
Frame = +2
Query: 233 GGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXX 412
G +ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKIN 116
Query: 413 XXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINKXQTGL 568
ARGH I + P + + ++ + K + L
Sbjct: 117 LKEKRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDAL 168
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 243 HQTS 254
++TS
Sbjct: 60 YETS 63
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 99.5 bits (237), Expect = 6e-20
Identities = 44/115 (38%), Positives = 61/115 (53%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
+A + G+ + + SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGYQTS-ARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 389 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
R WH +RGH +E +P P + D ++ + K
Sbjct: 108 RHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTK 162
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +3
Query: 69 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 249 TS 254
TS
Sbjct: 61 TS 62
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 97.9 bits (233), Expect = 2e-19
Identities = 44/102 (43%), Positives = 56/102 (54%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 427
+ +ESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 62 HSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRR 121
Query: 428 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
ARGH I+ +P P + D V++I K
Sbjct: 122 FAMCSAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKK 163
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +3
Query: 81 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ S
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHS 63
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 97.1 bits (231), Expect = 3e-19
Identities = 43/98 (43%), Positives = 56/98 (57%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 439
SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 61 SWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIF 120
Query: 440 XXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
+RG+ ++ IP P++ D +++I K
Sbjct: 121 SAIASSSIVSIIVSRGYRVKTIPEIPFVIEDSIEKIPK 158
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/102 (42%), Positives = 54/102 (52%)
Frame = +2
Query: 248 NQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 427
+ +ESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 59 HSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKK 118
Query: 428 XXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
+ARGH I + P + D + + K
Sbjct: 119 IAEAMAVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARK 160
Score = 41.1 bits (92), Expect = 0.023
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = +3
Query: 84 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q S
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHS 60
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/86 (45%), Positives = 46/86 (53%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 439
SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 66 SWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVA 125
Query: 440 XXXXXXXXXXXXQARGHIIEKIPSFP 517
ARGH I +P P
Sbjct: 126 SCIAASAVPALVSARGHHIAGVPQIP 151
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +3
Query: 72 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 251
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 252 S 254
S
Sbjct: 63 S 63
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/98 (39%), Positives = 50/98 (51%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 439
SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 63 SWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIA 122
Query: 440 XXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
QARGH++ ++ P + D VQEI +
Sbjct: 123 SAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKR 160
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +3
Query: 69 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 249 TS 254
S
Sbjct: 59 VS 60
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/90 (34%), Positives = 48/90 (53%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 433
++SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 65 AKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKVKVSA 124
Query: 434 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL 523
+RGH ++ + +FP +
Sbjct: 125 FKTALLSTLFETLVVSRGHSLKDVKNFPMI 154
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 56.4 bits (130), Expect = 6e-07
Identities = 33/88 (37%), Positives = 38/88 (43%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 433
+ SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 60 AHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYA 113
Query: 434 XXXXXXXXXXXXXXQARGHIIEKIPSFP 517
+ARGH I +PS P
Sbjct: 114 VASALAASANAALVEARGHRIADVPSIP 141
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +3
Query: 78 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQ 57
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 52.8 bits (121), Expect = 7e-06
Identities = 32/108 (29%), Positives = 46/108 (42%)
Frame = +2
Query: 230 QGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 409
+G + ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 410 XXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
ARGH++EK+PS P + ++IN+
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINR 180
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXX 430
+ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 58 AESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRA 116
Query: 431 XXXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
+ RGH+I+ +P P + D+++ +NK
Sbjct: 117 ALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNK 157
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +3
Query: 78 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TS
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTS 57
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.018
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 310 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 414
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 40.3 bits (90), Expect = 0.040
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 168 DLVNDVHVSMSKNSRQPYCVSKEAGHQTS 254
D+VN VH ++ KN QPY VS+ AG+QTS
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTS 53
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 185 SRFYVQELEAALLREQGGWSPNQSESWGTGRAVARIPRVRGGG 313
S + + + + E G+ + +ESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGYQTS-AESWGTGRARGPMPRVRGGG 73
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 39.9 bits (89), Expect = 0.053
Identities = 27/95 (28%), Positives = 37/95 (38%)
Frame = +2
Query: 269 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 448
TG ARI R++GGG R G+ RGGR P K + H
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAI 124
Query: 449 XXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEINK 553
RGHII+ I P + D ++ ++K
Sbjct: 125 AATASKSTVAGRGHIIDGI-ELPIVISDDIESVSK 158
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 37.5 bits (83), Expect = 0.28
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +1
Query: 271 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 435
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 436 GGSRCCYRRPSARS 477
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 37.1 bits (82), Expect = 0.38
Identities = 23/98 (23%), Positives = 41/98 (41%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 433
+ES+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 59 AESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLA 113
Query: 434 XXXXXXXXXXXXXXQARGHIIEKIPSFPWL*PDKVQEI 547
+ RGH + ++ P++ D+++ +
Sbjct: 114 IRSAIAATANKELVEQRGHQVSELEQIPFVIDDEIETV 151
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.9 bits (79), Expect = 0.87
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 120 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 206
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 391
R QGG P ++ + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 284 ARIPRVRGGGTHRSGQGAFGNMCRGG 361
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 260 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 382
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 356 HDTCYRRHPDRTYEYHHHGHAEFGRQH 276
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_126, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 2025
Score = 34.3 bits (75), Expect = 2.7
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +2
Query: 71 SPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPN 250
S VGV ++ G+ A P V+ A P G + + A+LR+ G SP+
Sbjct: 1937 STVVDVGVSKQ---GSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPS 1993
Query: 251 QSESWGTGRAVARIPRVRGGGTHRSGQG 334
G GRA+ R VR GG R+G+G
Sbjct: 1994 VGR--GRGRAITRGRGVR-GGRGRAGRG 2018
>UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1491
Score = 34.3 bits (75), Expect = 2.7
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +2
Query: 71 SPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPN 250
S VGV ++ G+ A P V+ A P G + + A+LR+ G SP+
Sbjct: 1403 STVVDVGVSKQ---GSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPS 1459
Query: 251 QSESWGTGRAVARIPRVRGGGTHRSGQG 334
G GRA+ R VR GG R+G+G
Sbjct: 1460 VGR--GRGRAITRGRGVR-GGRGRAGRG 1484
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 34.3 bits (75), Expect = 2.7
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +1
Query: 505 SQLPLVVARQSPRDQQXPNRLVIFLRRLKAWSDI 606
S++PLVV+ + ++ + VIFLRR+KAWSD+
Sbjct: 13 SEIPLVVSDKI-QEINKTKQAVIFLRRIKAWSDV 45
>UniRef50_Q1DCK1 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 1494
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 137 PVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPNQSESWGTGRAVARIPRVRG 307
PV V+ +GP SR+ V+ E ++ GGWSP Q + G A P V G
Sbjct: 946 PVLVEAGTAAGP---VSRYNVETQERWMVALSGGWSPGQEKGRGIYMVDAWSPEVNG 999
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.1 bits (72), Expect = 6.1
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 341 RRHPDRTYEYHHHGHAEFGRQHVQ-YP 264
R PD + +HHHGH G HV+ YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_UPI0000DB70F4 Cluster: PREDICTED: similar to scribbler
CG5580-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to scribbler CG5580-PA, isoform A -
Apis mellifera
Length = 1927
Score = 33.1 bits (72), Expect = 6.1
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 359 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQTGLVTSLLAHAVGLPRVLG 198
HH + HP + +HHH H +Q +Q GL +S L P G
Sbjct: 178 HHPHHHHPHPHHHHHHHHHHHHHHHQQQLQNSSTTNGLNSSNLIAVTTSPNGCG 231
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.1 bits (72), Expect = 6.1
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 364
RE GG + +SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGGA----QSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 293
Score = 32.7 bits (71), Expect = 8.1
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +1
Query: 370 RPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG 480
RP A AA P RQ P E GGS Y P+ RSG
Sbjct: 122 RPGPAQAARPPPRQWPCTECPGGGSGVVYHLPTERSG 158
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 8.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 371 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 279
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,917,632
Number of Sequences: 1657284
Number of extensions: 13387058
Number of successful extensions: 43729
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 40331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43288
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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