Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060087.seq
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    23   5.4  
AF117752-1|AAD38338.1|  155|Anopheles gambiae serine protease 2A...    23   7.1  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    23   9.4  

>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 249 DPEASFLPSQDQPTECTLDECAMYSRVVLCDAK*LRNSLKSSIGA 115
           D  A+ +P  +  +EC L+   +Y+R    D K L +    S+ A
Sbjct: 64  DKGAASMPKTECMSECILNSTGIYNRRGDVDEKKLNSVFTDSLPA 108


>AF117752-1|AAD38338.1|  155|Anopheles gambiae serine protease 2A
           protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 164 NTTREYIAHSSKVHSVGWSCDGRKLASGSFVKALQYLI 277
           NT R  I  S  +  +GW  DG    +   +K   Y I
Sbjct: 71  NTDRPEIGPSINLTVMGWGADGDGQRADKLMKGTVYEI 108


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 442 PTKGXNLNIAWAPNGQHHC 498
           P+   N+   W P  +HHC
Sbjct: 90  PSSFENVTSKWYPEIKHHC 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,078
Number of Sequences: 2352
Number of extensions: 10617
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)