Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060087.seq
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 38 0.005
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 35 0.048
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 35 0.048
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 34 0.063
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 34 0.063
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 34 0.063
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 34 0.083
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 34 0.083
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 33 0.19
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 32 0.25
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 32 0.25
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 32 0.25
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 32 0.25
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 30 1.0
AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical ... 30 1.4
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 29 1.8
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 29 1.8
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z74034-3|CAF31476.1| 322|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 29 3.1
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 29 3.1
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 29 3.1
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 28 4.1
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 28 4.1
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 28 4.1
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 28 4.1
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.2
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.2
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 7.2
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 7.2
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 27 9.5
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 27 9.5
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 27 9.5
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 27 9.5
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 27 9.5
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 286 SRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPTKGXNL- 462
+R +D +GHT +V L W+ +L++ DK+V W K A IP +G +
Sbjct: 234 ARKKRDNSAQGHTDAVISLAWNRITTHVLASGGADKTVVLWDLDEAKPAQIIPDQGGEIQ 293
Query: 463 NIAWAPN 483
+ W PN
Sbjct: 294 TMKWHPN 300
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPT 447
GH SV+ L W + LL++ S D S++ W TRS A + T
Sbjct: 273 GHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCT 316
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 35.5 bits (78), Expect = 0.027
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 319 HTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATI 441
HTGS+ L W + +TAS DKSV+ W + K TI
Sbjct: 236 HTGSIFALAWSPDQSRI-ATASADKSVKIWDVSARKLERTI 275
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 188 HSSKVHSVGWSCDGRKLASGS 250
H+SKV +V WS D ++LA+GS
Sbjct: 524 HTSKVLTVAWSPDNQRLATGS 544
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 34.7 bits (76), Expect = 0.048
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATI 441
GH +V +C+H P L+ T S D +VR W +++ T+
Sbjct: 227 GHAQNVSSVCFHPELP-LIITGSEDSTVRLWHANTYRLETTL 267
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 310 FKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIP--TKGXN 459
F+GHT V Q+ + +TAS DK+V+ W S+ T+ KG N
Sbjct: 138 FEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVN 189
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 34.7 bits (76), Expect = 0.048
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 259 SVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTR 417
S+ +N+ R S +FK H S L WHA+ P +L + S D +V+ + R
Sbjct: 126 SIVCWNISRRNKS---VFKSHERSATCLDWHATTPYILVSGSRDCTVKSYDMR 175
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 IFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPTKGXNLN-IAWAP 480
+FKGH V+ + WH + + DK + W R+ I +N +A+ P
Sbjct: 217 VFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNP 275
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 313 KGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAA 435
KGHT L W+ + L+ +AS D++V W +++ A
Sbjct: 169 KGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVA 209
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 IFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPTKGXNLN-IAWAP 480
+FKGH V+ + WH + + DK + W R+ I +N +A+ P
Sbjct: 217 VFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNP 275
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 313 KGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAA 435
KGHT L W+ + L+ +AS D++V W +++ A
Sbjct: 169 KGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVA 209
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 34.3 bits (75), Expect = 0.063
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 307 IFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPTKGXNLN-IAWAP 480
+FKGH V+ + WH + + DK + W R+ I +N +A+ P
Sbjct: 217 VFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNP 275
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 313 KGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAA 435
KGHT L W+ + L+ +AS D++V W +++ A
Sbjct: 169 KGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVA 209
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 33.9 bits (74), Expect = 0.083
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2
Query: 167 TTREYIAHSSKVHSVGWSCDGRKLASGSFVKALQ 268
+TR++I+H+ V SV +S D R++ SGS K+++
Sbjct: 103 STRQFISHTKDVLSVAFSADNRQIVSGSRDKSIK 136
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 33.9 bits (74), Expect = 0.083
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 262 VAIFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
V I++++ SR + GH G V+ + W+ + P +L + D ++R W
Sbjct: 547 VVIWSVQDSRPRYSLV--GHRGHVNAVAWNPADPTMLVSCGADATIRVW 593
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 259 SVAIFNLERSRLSQDF-IFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTR 417
++ ++L +S L + +F GH GSV +C+ P + T D V+ W R
Sbjct: 117 TIRCWDLNQSTLDRKSQVFFGHEGSVRSICFAPDDPNVFVTGGRDFQVKIWDMR 170
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +1
Query: 256 KSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAA 435
K V +F++ R + KGHT V C++ S L+++ S D+++R W R+
Sbjct: 170 KLVKVFDVSSGRCVKTL--KGHTNYVFCCCFNPSGT-LIASGSFDETIRIWCARNGNTIF 226
Query: 436 TIP 444
+IP
Sbjct: 227 SIP 229
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 268 IFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASG--DKSVRXWXTRSHKXAATI 441
++NL R+ Q + H +V L W LL + G D+ +R W T + + +
Sbjct: 548 VWNLRRNEPIQTYT--QHNAAVKALAWSPHHHGLLVSGGGTADRCLRFWNTLTAQPMQCV 605
Query: 442 PTKGXNLNIAWA 477
T N+AW+
Sbjct: 606 DTGSQVCNVAWS 617
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 313 KGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPTKGXNL-NIAWAPNG 486
+GH G V Q+ W A LL + S D +++ + ++ +P G + + W+P G
Sbjct: 399 RGHVGPVYQVAWSAD-SRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEG 456
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPTK-GXNLNIAWAPNGQ 489
GH V+Q+ + + +++AS DKSV+ W R+ K A++ G +AW+ + +
Sbjct: 358 GHMQLVNQVVF-SPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSR 415
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 188 HSSKVHSVGWSCDGRKLASGS 250
H V+ V WS D R L SGS
Sbjct: 401 HVGPVYQVAWSADSRLLVSGS 421
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 319 HTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIP 444
H+GSV L W + S AS DK+++ W + K TIP
Sbjct: 238 HSGSVFGLTWSPDGTKIAS-ASADKTIKIWNVATLKVEKTIP 278
Score = 30.7 bits (66), Expect = 0.78
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 182 IAHSSKVHSVGWSCDGRKLASGSFVKALQ 268
+AHS V + WS DG K+AS S K ++
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIK 264
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 319 HTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIP 444
H+GSV L W + S AS DK+++ W + K TIP
Sbjct: 238 HSGSVFGLTWSPDGTKIAS-ASADKTIKIWNVATLKVEKTIP 278
Score = 30.7 bits (66), Expect = 0.78
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 182 IAHSSKVHSVGWSCDGRKLASGSFVKALQ 268
+AHS V + WS DG K+AS S K ++
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIK 264
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +1
Query: 304 FIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPTKGXNLNIAWAP 480
F +GHTG V + LL++ D +VR W + + T G +++++P
Sbjct: 338 FYMRGHTGQVRAITVEPERGELLASGGEDGTVRIWMIATGRCIKTFQMDGEVTSVSFSP 396
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 319 HTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIP 444
H+GSV L W + S AS DK+++ W + K TIP
Sbjct: 238 HSGSVFGLTWSPDGTKIAS-ASADKTIKIWNVATLKVEKTIP 278
Score = 30.7 bits (66), Expect = 0.78
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 182 IAHSSKVHSVGWSCDGRKLASGSFVKALQ 268
+AHS V + WS DG K+AS S K ++
Sbjct: 236 VAHSGSVFGLTWSPDGTKIASASADKTIK 264
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 152 FASHNTTREYIAHSSKVHSVGWSCDGRKLASGS 250
F + N R + AH V + WS DGRKL + S
Sbjct: 54 FMTRNIARTFSAHCLPVSCLSWSRDGRKLLTSS 86
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +1
Query: 310 FKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAAT 438
FKGH+ + + + +HA + + D+ + W R K T
Sbjct: 217 FKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLT 259
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRS 420
GHT V+ + ++ +L+T S DK+V W R+
Sbjct: 262 GHTAEVNCITFNPFSEYILATGSVDKTVALWDMRN 296
>AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical
protein Y73E7A.9 protein.
Length = 558
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 307 IFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
+ +GH+G V+ L W+ + LL++ S D++V+ W
Sbjct: 36 MLEGHSGCVNTLRWNKTG-ALLASGSDDRNVKIW 68
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
GHT ++ + +H+S L+S AS D +VR W
Sbjct: 464 GHTDAIWSVAYHSSNSRLVS-ASSDSTVRLW 493
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
GHT ++ + +H+S L+S AS D +VR W
Sbjct: 464 GHTDAIWSVAYHSSNSRLVS-ASSDSTVRLW 493
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 256 KSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAA 435
K++ IF + SR+++ KGH V C L+ + S D+SVR W ++
Sbjct: 151 KTLKIFEIVTSRMTKTL--KGHNNYVF-CCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK 207
Query: 436 TIP 444
T+P
Sbjct: 208 TLP 210
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 286 SRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASGD--KSVRXWXTRSHKXAATI 441
+R +++ + +GH V + WH + L++T S D + V+ W +S AT+
Sbjct: 247 ARYTEERVLRGHGAEVRCIDWHPT-KGLIATGSRDTQQPVKIWDPKSGSCLATL 299
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +1
Query: 310 FKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHK 426
++ H V L WH L + GD S+ W K
Sbjct: 341 YRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEK 379
>Z74034-3|CAF31476.1| 322|Caenorhabditis elegans Hypothetical
protein F43A11.6 protein.
Length = 322
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 463 NIAWAPNGQHHCGWGQGVXVPFS 531
N+AW PN Q HC V PF+
Sbjct: 172 NLAWVPNIQSHCHIDDNVPNPFN 194
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 298 QDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
Q + GHT SV L P +AS DK++R W
Sbjct: 157 QTIVCPGHTLSVWALASFPDLPNTYLSASADKTIRMW 193
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 298 QDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
Q + GHT SV L P +AS DK++R W
Sbjct: 157 QTIVCPGHTLSVWALASFPDLPNTYLSASADKTIRMW 193
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 310 FKGHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
FKGHT +V LC ++ L + S DK+V W
Sbjct: 907 FKGHTAAVTCLC-SSNDSSLFVSTSFDKTVNVW 938
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 267 CNAFTNDPEASFLPSQDQPTECTLDEC 187
CN P LP +DQ +CTL+ C
Sbjct: 1409 CNPQPPCPSTELLPQRDQIGDCTLNSC 1435
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 NLERSRLSQDFIFKGH-TGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHK 426
N + S + Q FI GH G V+ + W+ + S DK+ + W RS K
Sbjct: 352 NRDGSMVKQSFI--GHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWDVRSSK 401
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 276 IKYCNAFTNDPEASFLPSQDQPTECTLDEC 187
I YC+A + E S +P ++ T C +++C
Sbjct: 2177 ICYCSADQTNVEVSKIPDEESSTPCQVNQC 2206
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 310 FKGHTGSVDQLCWHASXPXLLSTASGDKSVR 402
FKGH G ++ + WH S +++T D +R
Sbjct: 283 FKGHFGPINTMAWHPSG-TIIATGGEDGYIR 312
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIP 444
GHT + + W + ++ T S D S++ W R + T+P
Sbjct: 378 GHTKEIHSVEWMPNGYEMI-TGSSDNSMKVWDLRMRRNTYTMP 419
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.5 bits (58), Expect = 7.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 179 YIAHSSKVHSVGWSCDGRKLAS 244
++ H+ + + WS DGR++AS
Sbjct: 717 FVNHTGGILGIAWSADGRRIAS 738
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 253 RKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTA-SGDKSVRXWXTR 417
R V ++++ +S+ KGHT V + WH + ++S+A G +V W R
Sbjct: 422 RGEVVVYDIMSGTVSRRL--KGHTAVVRECDWHPTENEIVSSAWDGVTTVWTWDER 475
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 253 RKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTA-SGDKSVRXWXTR 417
R V ++++ +S+ KGHT V + WH + ++S+A G +V W R
Sbjct: 463 RGEVVVYDIMSGTVSRRL--KGHTAVVRECDWHPTENEIVSSAWDGVTTVWTWDER 516
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATI 441
GH V L H + P + + + D V+ W S + AT+
Sbjct: 64 GHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRECQATL 105
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 27.5 bits (58), Expect = 7.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 179 YIAHSSKVHSVGWSCDGRKLAS 244
++ H+ + + WS DGR++AS
Sbjct: 717 FVNHTGGILGIAWSADGRRIAS 738
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 27.5 bits (58), Expect = 7.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 179 YIAHSSKVHSVGWSCDGRKLAS 244
++ H+ + + WS DGR++AS
Sbjct: 717 FVNHTGGILGIAWSADGRRIAS 738
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 268 IFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPT 447
+F+L+ S S + GH G V + + L+S+A GD++VR W + + A T
Sbjct: 378 MFDLQGSTTSVRYT--GHGGPVFSVNFSPDRRLLISSA-GDRTVRLWSMETQRNAVIYRT 434
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 268 IFNLERSRLSQDFIFKGHTGSVDQLCWHASXPXLLSTASGDKSVRXWXTRSHKXAATIPT 447
+F+L+ S S + GH G V + + L+S+A GD++VR W + + A T
Sbjct: 378 MFDLQGSTTSVRYT--GHGGPVFSVNFSPDRRLLISSA-GDRTVRLWSMETQRNAVIYRT 434
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 313 KGHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
+ HTG V+ + W P + TA D W
Sbjct: 309 RNHTGPVNGIAWAPHSPHHICTAGDDSQALIW 340
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
GHT SV L P +AS DK++R W
Sbjct: 161 GHTLSVWALASFPDLPNTYLSASADKTIRMW 191
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 316 GHTGSVDQLCWHASXPXLLSTASGDKSVRXW 408
GHT SV L P +AS DK++R W
Sbjct: 161 GHTLSVWALASFPDLPNTYLSASADKTIRMW 191
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 188 HSSKVHSVGWSCDGRKLASGS 250
HS +V +V WS +G+ LASGS
Sbjct: 132 HSMEVLTVEWSPNGKYLASGS 152
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 188 HSSKVHSVGWSCDGRKLASGS 250
HS +V +V WS +G+ LASGS
Sbjct: 420 HSMEVLTVEWSPNGKYLASGS 440
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,182,018
Number of Sequences: 27780
Number of extensions: 234710
Number of successful extensions: 667
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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