Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060086.seq
(572 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 75 5e-14
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18) 38 0.006
SB_51892| Best HMM Match : WD40 (HMM E-Value=8.7e-14) 37 0.013
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 36 0.018
SB_42943| Best HMM Match : WD40 (HMM E-Value=0) 36 0.031
SB_45687| Best HMM Match : WD40 (HMM E-Value=4.5e-16) 36 0.031
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 33 0.13
SB_6110| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21) 33 0.17
SB_50270| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 33 0.22
SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40) 32 0.29
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42) 32 0.38
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 31 0.67
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.67
SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42) 31 0.67
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19) 30 1.2
SB_23694| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45) 30 1.5
SB_56034| Best HMM Match : GATA (HMM E-Value=5.6e-17) 30 1.5
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15) 29 2.7
SB_2216| Best HMM Match : WD40 (HMM E-Value=9.6e-16) 29 2.7
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22) 29 3.6
SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22) 29 3.6
SB_44417| Best HMM Match : RdRP_2 (HMM E-Value=5.6) 29 3.6
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 29 3.6
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 29 3.6
SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_13850| Best HMM Match : WD40 (HMM E-Value=3.1e-06) 28 4.7
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24) 28 4.7
SB_11437| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24742| Best HMM Match : E-MAP-115 (HMM E-Value=4.8) 28 6.2
SB_18573| Best HMM Match : WD40 (HMM E-Value=1.5e-06) 28 6.2
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 27 8.2
SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36) 27 8.2
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16) 27 8.2
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 74.5 bits (175), Expect = 5e-14
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +1
Query: 256 KSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
++ ++F L++ RL+ D I+KGH VDQLCWH S+PDL T GDK++RIWD R
Sbjct: 55 RTASVFVLDKDRLTLDHIYKGHNESVDQLCWHPSNPDLFVTASGDKTIRIWDAR 108
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/44 (56%), Positives = 36/44 (81%)
Frame = +2
Query: 122 IEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSF 253
++ L+E+R +F + T+++ AH+SKVHSV WSCDGR+LASGSF
Sbjct: 10 LDYLNEMRKHFECNTKTKDFTAHNSKVHSVSWSCDGRRLASGSF 53
>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
Length = 736
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHK 426
GH G V L W HPD L T D S ++WD +++
Sbjct: 20 GHCGRVTALSWSPHHPDRLVTSSYDGSAQVWDVETNQ 56
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 310 FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIW 408
++GH G V +CW PD++ + D +VR W
Sbjct: 61 YRGHVGRVMSVCWSYLDPDVVFSGGEDGTVRPW 93
>SB_51892| Best HMM Match : WD40 (HMM E-Value=8.7e-14)
Length = 353
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 310 FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIW 408
F GHTG + Q+ W+ +P+ T D SVR+W
Sbjct: 111 FHGHTGPIYQVKWNPLYPEAFLTCSADWSVRLW 143
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 313 KGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDT 414
+ HT V++L W+ + +LL++ D SVR+WDT
Sbjct: 201 QAHTSGVNRLDWNPVYTNLLASCSMDNSVRVWDT 234
>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
Length = 273
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 250 IRKSVAIFN-LERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWD 411
IR+++ ++ + +LS KGH G V Q+ + S+PD + + DK + +W+
Sbjct: 27 IRRNLGLYRAIMAEQLSLRGTLKGHNGWVTQIATNPSNPDTILSSSRDKKLIVWE 81
>SB_45687| Best HMM Match : WD40 (HMM E-Value=4.5e-16)
Length = 301
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 310 FKGHTGXVDQL--CWHASHPDLLSTXXGDKSVRIWDTRS 420
F HT V + C HA HP L ++ DK+VR+WD +
Sbjct: 135 FTEHTDRVSSVRFCPHALHPGLCASGADDKTVRLWDVET 173
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 33.9 bits (74), Expect = 0.095
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 292 LSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCA-ATIPTKGGK 459
L + FI GHT + W+ + P +L + D +++W + H C PTK +
Sbjct: 892 LQRKFIHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVW--QMHPCGLCNKPTKSNQ 946
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 33.9 bits (74), Expect = 0.095
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 310 FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
F H G V L WH + ++T DK V++WD +
Sbjct: 417 FMAHNGPVFTLDWHPEDRNWIATGGRDKCVKVWDVQ 452
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 262 VAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHK 426
+ +++++ RL + + GH V L + SHP L+S DK+VR+W+ K
Sbjct: 1361 IFVWSIQTGRLLE--VLAGHEAPVSSLAFSPSHPVLIS-GAWDKTVRLWNVFESK 1412
>SB_6110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2051
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 253 RKSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSH 423
R+ + F+L++++L F GH+G V LC S LS DK+V++W +H
Sbjct: 1718 RERKSQFHLQQAKLQT---FTGHSGAVRSLCIQDSEHYFLSASK-DKTVKLWSLSNH 1770
>SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)
Length = 123
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 289 RLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWD 411
+LS KGH G V Q+ + S+PD + + DK + +W+
Sbjct: 4 QLSLRGTLKGHNGWVTQIATNPSNPDTILSSSRDKKLIVWE 44
>SB_50270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 857
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 247 VIRKSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHK 426
++ +V +F+LE S GHTG V + +H ++T DK V IWD + K
Sbjct: 148 LMANAVKVFDLETRMFSN---MHGHTGYVLSIIALGNHQ--VATGSMDKQVMIWDAATLK 202
Query: 427 C 429
C
Sbjct: 203 C 203
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 316 GHTGXVDQLCWHASHPD-LLSTXXGDKSVRIWDTRSHKCAATIPTKGGK 459
GHT +D C + D + T GD + IW+T +H C T+ GGK
Sbjct: 212 GHTQRLD--CVTVTRDDKFIVTSGGDSLINIWNTENHDCIHTLKI-GGK 257
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 259 SVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPD-LLSTXXGDKSVRIWDTRSHKCAA 435
++ +++L + Q + +GHT V LC + D + + D + R+W+ + KC +
Sbjct: 697 TIRLWDLTKGECKQ--VMQGHTNEV--LCLSVTSNDKTIVSGSNDFTARVWNVATGKCVS 752
Query: 436 TI 441
T+
Sbjct: 753 TV 754
>SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40)
Length = 400
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 295 SQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR-SHKCAATIPTKGGK 459
S I +GH V + W + LL+T D V +WD R + C + GK
Sbjct: 177 SASHILRGHATAVLSVSWSPLNQYLLATGGRDNKVLLWDVRKAVSCLTALDQHNGK 232
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/50 (20%), Positives = 25/50 (50%)
Frame = +1
Query: 319 HTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGGKHKY 468
H ++ + W+ + T D+++++WDT + + T +G +K+
Sbjct: 98 HRSSIETVQWYPHDSGMFLTSSVDRTLKVWDTNALQVVETFNFEGIVYKH 147
>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 322 TGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR---SHKCAATI 441
+G + WH H L + D + IWDTR S+K A T+
Sbjct: 275 SGISKDVSWHLLHESLFGSVADDHKLMIWDTRQTNSNKAAHTV 317
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +1
Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIW 408
FI GHT + W+ + P +L + D +++W
Sbjct: 416 FIHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVW 450
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 319 HTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHK 426
HT V+ L ++ +L+T DK+V +WD R+ K
Sbjct: 320 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 355
>SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42)
Length = 383
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 313 KGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
+GH G V+ + + + + S DKS+RIW S KC T+
Sbjct: 185 RGHQGAVNVVAFSLDNRYIFS-GSDDKSIRIWSRESSKCENTL 226
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 310 FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIW 408
F GHTG V LC H +LL + DK+++IW
Sbjct: 456 FVGHTGPVWALCVHG---ELLFSGSSDKTIKIW 485
>SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 388 DKSVRIWDTRSHKCAATIP 444
D+SVRIWD ++ KC T+P
Sbjct: 78 DESVRIWDVKTGKCLKTLP 96
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGGKHKY 468
++ HT V C+ A+ +L++ GDK+ R+WD A P G H Y
Sbjct: 6 YVISRHTKDVTGCCFSANSR-VLASCSGDKTARLWDVEKGTELAQSPLDG--HNY 57
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKC 429
F GH + +L +++PD++ + + VR+WD + +C
Sbjct: 3200 FTLHGHRDGITELKVDSNNPDIVISGASNGGVRVWDLSTGEC 3241
>SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42)
Length = 198
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGGKHKY 468
++ HT V C+ A+ +L++ GDK+ R+WD A P G H Y
Sbjct: 6 YVISRHTKDVTGCCFSANSR-VLASCSGDKTARLWDVEKGTELAQSPLDG--HNY 57
>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
Length = 1199
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 295 SQDFI--FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCA 432
+ DFI KGH+ V L H S DL + DK +W + HK A
Sbjct: 605 TSDFIPLVKGHSDEVPALAVHPSK-DLFISASMDKFAYLWSAKDHKTA 651
>SB_23694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 295 SQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
++ +++GH+G V + + L+T DKSV+ W+ + +C T+
Sbjct: 24 TEALVYEGHSGMVRCVTVDPTG-QWLATGSDDKSVKFWEVATGRCTKTV 71
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
GHT V+ + W+ P ++++ D +VRIW + + + +
Sbjct: 245 GHTRTVNCVTWNPLVPSMMASASDDGTVRIWGPSTEETSGNL 286
>SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45)
Length = 426
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 313 KGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGGKHKYS 471
K H+G + L W +L T GDKS +IW+ K T P + YS
Sbjct: 202 KAHSGGIYGLSWSDDSKFIL-TASGDKSCKIWNIED-KSLQTFPLVARLYCYS 252
>SB_56034| Best HMM Match : GATA (HMM E-Value=5.6e-17)
Length = 297
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 FYMITKAMKDSKHSQAPIEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDG-RKLASG 247
FYM + DSK + I +L +S+F + N T + S K +G S D R LAS
Sbjct: 3 FYMKKHSFFDSKRIPSSIAELERYKSFFTNLNET-SHSGISIKKAKIGQSPDSIRSLASC 61
Query: 248 S 250
S
Sbjct: 62 S 62
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 319 HTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRS 420
H+G V L ++ P+LL++ D + IWD S
Sbjct: 122 HSGAVQALDFNPFQPNLLASGASDSEIFIWDMNS 155
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 188 HSSKVHSVGWSCDGRKLASGSFVK 259
H V+++ +S DGR LASGSF K
Sbjct: 332 HHEPVYTISFSPDGRYLASGSFDK 355
>SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15)
Length = 365
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = +1
Query: 307 IFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWD 411
+FK TG + + WH + + + D + +WD
Sbjct: 270 LFKHSTGPITSVEWHPTDGSVFAASSADNQITLWD 304
>SB_2216| Best HMM Match : WD40 (HMM E-Value=9.6e-16)
Length = 400
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 238 GFWVIRKSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
G+ ++ V ++ + RL + GH + + S P+ L T D+ VRI+DTR
Sbjct: 205 GYGILGNKVRLYQVSSCRLLA--LLSGHHYEITCINVRDSPPNRLITGSYDRRVRIFDTR 262
Query: 418 SHKCAATI 441
T+
Sbjct: 263 CESPTQTL 270
>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
Length = 453
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 307 IFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
I H + + W+ + D+L++ D V IW + K A++
Sbjct: 56 ILADHRKTITAIAWNPHNEDILASAGADCRVLIWSIKEQKIIASL 100
>SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)
Length = 442
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSH 423
GH G V L W+ +++T D V IW H
Sbjct: 13 GHKGAVLDLAWNPFDDHMIATGSEDARVMIWQIPEH 48
>SB_44417| Best HMM Match : RdRP_2 (HMM E-Value=5.6)
Length = 541
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -3
Query: 234 FLPSQDQPTECTLDECAMYSRVVLCDAK*LRNS--LKSSIGACECFESFIA 88
FLPS TEC L C Y V LR S L S EC +F++
Sbjct: 58 FLPSHTATTECALTFCHRYEEVCSYLLTPLRGSVPLPSHTSTRECVFTFLS 108
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 188 HSSKVHSVGWSCDGRKLASGSFVKALQ 268
H+ +V S+ WS DG++LA+ S K L+
Sbjct: 152 HNEQVFSLAWSADGKQLATFSRDKKLR 178
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
F +GH V LC+ A+H L + D ++ +WD R
Sbjct: 124 FELQGHISKVQALCF-AAHSKKLISCGEDGAIMVWDMR 160
>SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 307 IFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
+ +GH G V C P +LS DK++++W+ S C T+
Sbjct: 637 VLQGHEGAVS--CLEFDAPFVLS-GSADKTIKLWNVESGDCLNTL 678
>SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSH 423
GH G V L W+ +++T D V IW H
Sbjct: 77 GHKGAVLDLAWNPFDDHMIATGSEDARVMIWQIPEH 112
>SB_13850| Best HMM Match : WD40 (HMM E-Value=3.1e-06)
Length = 229
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 313 KGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
KGH + + +H + +LL++ D +V++WD + K T+
Sbjct: 181 KGHYDKPNIVRYHPNAENLLTSAAYDLTVKLWDINAAKSVITL 223
>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
Length = 515
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
GH V+ + ++ PD+L + D ++R+W +R
Sbjct: 475 GHQNVVNCVAFNPRDPDMLVSASDDHTLRVWKSR 508
>SB_11437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 352 ASHPDLLSTXXGDKSVRIWDTRSHKC 429
ASHP+L T D ++R+W C
Sbjct: 169 ASHPELGITASADSTIRVWSITKGSC 194
>SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +1
Query: 256 KSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAA 435
++V I+N +L Q +GHT ++ + + T GD + +W + +C A
Sbjct: 239 RNVCIWNANSGKLLQTL--RGHTDEIE------FDDEKVVTGGGDNLIMVWSAHTGECTA 290
Query: 436 TIPTKGGK 459
T+ G+
Sbjct: 291 TLSGHTGE 298
>SB_24742| Best HMM Match : E-MAP-115 (HMM E-Value=4.8)
Length = 215
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +2
Query: 2 GTRNSRQINKKH*QENN*SFNVKFYMITKAMKDSKHSQAPIEDLSELRSYFASHNTTREY 181
GT+ ++ +K + N + K A + + +AP+ D+ EL+ A+ EY
Sbjct: 85 GTKKNKDTKQKESRTRNAESSRKSDTYRGANESRRDYRAPVADIDELKQSIANVQEQEEY 144
Query: 182 IAHS 193
+ S
Sbjct: 145 VLSS 148
>SB_18573| Best HMM Match : WD40 (HMM E-Value=1.5e-06)
Length = 76
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 388 DKSVRIWDTRSHKCAATI 441
D+S+R+WDT S C+ T+
Sbjct: 12 DESIRLWDTTSGTCSLTL 29
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +2
Query: 2 GTRNSRQINKKH*QENN*SFNVKFYMITKAMKDSKHSQAPIEDLSELRSYFASHNTTREY 181
GT+ ++ +K + N + K A + + +AP+ D+ EL+ A+ EY
Sbjct: 1748 GTKKNKDTKQKESRTRNAESSRKSDTYRGANESRRDYRAPVADIDELKQSIANVQEQEEY 1807
Query: 182 IAHS 193
+ S
Sbjct: 1808 VLSS 1811
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWD 411
GH V C+ +S +L+T DK++++WD
Sbjct: 210 GHINIVSTCCF-SSDEHMLATGSWDKNIQLWD 240
>SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 298 QDFI--FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKG 453
+DFI +GH V + WH +++++ D + IWD AA + KG
Sbjct: 128 EDFIGHLQGHDRKVGIIRWHPCASNIIASAGFDDVIIIWDVERE--AAVLILKG 179
>SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)
Length = 885
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGG 456
GHT V+ L H +L + D V++W+ + C TI G
Sbjct: 64 GHTDGVNCLSRHPRSLSVLLSGSCDGEVKLWNLPTKDCLRTITAHKG 110
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 307 IFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
I K H V +CW ++ T D+S R++++ S++C I
Sbjct: 228 ILKDHKHYVQGVCWDPLGQYVV-TNSSDRSCRLYNSLSYRCCYNI 271
>SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16)
Length = 675
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 149 YFASHNTTREYIAHSSKVHSVGWSCDGRKLASG 247
Y +T R Y H+ V S+ DGR +ASG
Sbjct: 162 YNLKKHTQRHYTQHTDDVKSLAVHPDGRTIASG 194
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,376,876
Number of Sequences: 59808
Number of extensions: 316556
Number of successful extensions: 764
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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