Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060085.seq
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.00 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.0  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.3  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +3

Query: 297 KCVCIKNLKFWPTCPTRCSNSSLDPTHRQLKNCATR 404
           KCV  K     PTC   C  ++ +   R  K+ A R
Sbjct: 872 KCVTCKCENGKPTCWRECDKATCEKLFRMKKSSALR 907


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 411 CFC*TYIPYLTTTDPCRPASSILAEESIL*KVRVDQIKSGHRRENEQVKKRSDL 572
           CF    +  + T        +++    +L  V V  IK+G R E +Q+ KRS L
Sbjct: 95  CFVMMALTLIVTLFTFLARGTLIKSFDMLSHVDVSFIKAGFRLEYKQLLKRSYL 148


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +3

Query: 411 CFC*TYIPYLTTTDPCRPASSILAEESIL*KVRVDQIKSGHRRENEQVKKRSDL 572
           CF    +  + T        +++    +L  V V  IK+G R E +Q+ KRS L
Sbjct: 95  CFVMMALTLIVTLFTFLARGTLIKSFDMLSHVDVSFIKAGFRLEYKQLLKRSYL 148


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 204 SFPPNRSQARFGLRAQDRTGGQTPTHNRQTLPRQLNQTSGCWQ 76
           S P NR   R  ++ +  T   T +HN +  PR    +S C Q
Sbjct: 263 SSPSNRF-TRHLIQRRTHTRHTTTSHNTRGTPRTTPASSRCGQ 304


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 114 LPRQLNQTSGCWQ*DCAR*YCQ 49
           L + ++  +G W+ +C   YCQ
Sbjct: 14  LLKNISALNGAWRWECKSNYCQ 35


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 627 HVNQYRXKRWIIT 665
           +V QY  +RWI+T
Sbjct: 388 YVAQYNARRWIVT 400


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
          protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 30 EMFKDQFDNINVRNLIANNQ 89
          E +  ++DNINV  ++A+ +
Sbjct: 17 EQYTTKYDNINVDEILASER 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,719
Number of Sequences: 336
Number of extensions: 3840
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)