Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060083.seq
(679 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15428 Cluster: Splicing factor 3A subunit 2; n=69; Euk... 138 1e-31
UniRef50_A2XET4 Cluster: Putative uncharacterized protein; n=2; ... 104 2e-21
UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n... 95 1e-18
UniRef50_Q4P204 Cluster: Putative uncharacterized protein; n=1; ... 94 3e-18
UniRef50_A1CIB5 Cluster: Splicing factor 3a subunit 2, putative;... 90 4e-17
UniRef50_UPI0000498F7E Cluster: splicing factor 3a subunit 2; n=... 87 5e-16
UniRef50_Q5CI85 Cluster: F11a10.2 protein; n=3; Cryptosporidium|... 85 2e-15
UniRef50_Q5APP1 Cluster: Potential splicing factor SF3A subunit ... 65 2e-09
UniRef50_A3GHS1 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 63 5e-09
UniRef50_A2DA83 Cluster: Splicing factor, putative; n=1; Trichom... 63 7e-09
UniRef50_A5AVJ0 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_UPI0000565504 Cluster: UPI0000565504 related cluster; n... 57 3e-07
UniRef50_Q3LVY8 Cluster: MRNA splicing factor 3A subunit 2; n=1;... 50 5e-05
UniRef50_Q7R0G4 Cluster: GLP_29_31467_32135; n=1; Giardia lambli... 48 2e-04
UniRef50_Q0TZL0 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_Q6E6H6 Cluster: Spliceosome-associated protein 62; n=1;... 44 0.003
UniRef50_Q07350 Cluster: Pre-mRNA-splicing factor PRP11; n=6; Sa... 42 0.014
UniRef50_Q8SSB4 Cluster: SPLICEOSOME-ASSOCIATED PROTEIN 62; n=1;... 38 0.17
UniRef50_Q4FZ32 Cluster: Putative uncharacterized protein; n=3; ... 36 0.69
UniRef50_UPI000065ED29 Cluster: zinc finger, matrin type 4; n=3;... 35 1.6
UniRef50_Q4DJR6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.6
UniRef50_Q29R03 Cluster: LD02865p; n=5; Drosophila melanogaster|... 35 2.1
UniRef50_UPI00015554D6 Cluster: PREDICTED: hypothetical protein,... 34 2.8
UniRef50_Q4SKX5 Cluster: Chromosome 17 SCAF14563, whole genome s... 33 6.4
UniRef50_Q4U9S8 Cluster: Putative uncharacterized protein; n=2; ... 33 8.4
>UniRef50_Q15428 Cluster: Splicing factor 3A subunit 2; n=69;
Eukaryota|Rep: Splicing factor 3A subunit 2 - Homo
sapiens (Human)
Length = 464
Score = 138 bits (334), Expect = 1e-31
Identities = 71/138 (51%), Positives = 81/138 (58%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ PEK ++
Sbjct: 45 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKV 104
Query: 435 EPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTA 614
E KKFVKIGRPGY+VTKQ D E G ++ + + + +R+
Sbjct: 105 EVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDR 164
Query: 615 DGQYXLFAAEPYETIALK 668
QY L AAEPYETIA K
Sbjct: 165 RWQYLLMAAEPYETIAFK 182
Score = 88.2 bits (209), Expect = 2e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +2
Query: 509 QSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
QSLLFQ+DYPEIAEG++PRHRFMSAY Q+IEPPDRRW + + FKVPSR
Sbjct: 130 QSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSR 186
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
MDFQ+RPGGKTG GGVAS SESNRDRRERLRQLALETID+NKDP
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDP 44
>UniRef50_A2XET4 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 352
Score = 104 bits (249), Expect = 2e-21
Identities = 55/132 (41%), Positives = 69/132 (52%)
Frame = +3
Query: 273 LGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRIEPKKFV 452
+ SYECKLCLTLHNNEG+YLAHTQGK+HQ P K + P+K V
Sbjct: 79 VSSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPNKRKFAPRKSV 138
Query: 453 KIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTADGQYXL 632
KIGRPGY+VTKQ DP+ + + ++ +++ QY L
Sbjct: 139 KIGRPGYQVTKQYDPDMKQHSFLFEIGYPEIEENSKPRHRFMASYEQKVESWDKKYQYLL 198
Query: 633 FAAEPYETIALK 668
FAAEPYE I K
Sbjct: 199 FAAEPYEIIGFK 210
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2
Query: 512 SLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPS 676
S LF++ YPEI E PRHRFM++Y QK+E D+++ + FK+PS
Sbjct: 159 SFLFEIGYPEIEENSKPRHRFMASYEQKVESWDKKYQYLLFAAEPYEIIGFKIPS 213
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +1
Query: 145 GGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
G K G GG AS DRRERLR+LALETIDL KDP
Sbjct: 6 GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDP 42
>UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n=5;
Plasmodium|Rep: Splicing factor 3a subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 233
Score = 95.5 bits (227), Expect = 1e-18
Identities = 54/138 (39%), Positives = 69/138 (50%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
Y +KN++G +ECKLCLTLHNNE SYL HTQGKKHQ KP
Sbjct: 45 YILKNNVGMFECKLCLTLHNNESSYLCHTQGKKHQMNLAQRLLKEKNEMTTNRL-NKPVS 103
Query: 435 EPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTA 614
EP+K VKIG+P Y VT+ + + + ++ +++
Sbjct: 104 EPRKIVKIGKPRYDVTRVRN-KKNQLGILFELSFPNIKENTKPKFRFMSSFEQKIEAPDK 162
Query: 615 DGQYXLFAAEPYETIALK 668
QY LFAAEPYETIA K
Sbjct: 163 KYQYLLFAAEPYETIAFK 180
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPIL*K 267
MDFQNR G KTG G S + N++RRERL+QLALE ID+ KDP + K
Sbjct: 1 MDFQNRVGHKTGSGMPLSREDINQERRERLKQLALENIDITKDPYILK 48
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +2
Query: 515 LLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPS 676
+LF++ +P I E P+ RFMS++ QKIE PD+++ + FK+P+
Sbjct: 130 ILFELSFPNIKENTKPKFRFMSSFEQKIEAPDKKYQYLLFAAEPYETIAFKIPN 183
>UniRef50_Q4P204 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 313
Score = 93.9 bits (223), Expect = 3e-18
Identities = 56/148 (37%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ-----XXXXXXXXXXXXXXXXXXXP 419
Y +KNHLG EC+LCLTLH NEGSYLAHTQGKKHQ
Sbjct: 119 YLLKNHLGGLECRLCLTLHTNEGSYLAHTQGKKHQTNLARRAAREAKENAYDSNKLITAS 178
Query: 420 EKPRIEPKKFVKIGRPGYRVTKQXDP-----ETGHRACSSK*IIQRLQRVLYLDIDLCLL 584
+ K+FVKIGRPGY+V+K +P E G + + +++ +
Sbjct: 179 AAESVPKKQFVKIGRPGYKVSKVREPLLEGGEGGRLGLLFQISLPEIKQGVMPMHRFMGS 238
Query: 585 MXRRLSLQTADGQYXLFAAEPYETIALK 668
+++ + QY + AAEPYETIA K
Sbjct: 239 FEQKIETPDRNYQYLVVAAEPYETIAFK 266
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPIL*K 267
MDF +R G K GGG+A SESN DRR+RLR+LALETIDL KDP L K
Sbjct: 77 MDFSSRGGNK--GGGIAGASESNVDRRDRLRKLALETIDLAKDPYLLK 122
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = +2
Query: 515 LLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
LLFQ+ PEI +GV+P HRFM ++ QKIE PDR + + + FK+ SR
Sbjct: 216 LLFQISLPEIKQGVMPMHRFMGSFEQKIETPDRNYQYLVVAAEPYETIAFKLQSR 270
>UniRef50_A1CIB5 Cluster: Splicing factor 3a subunit 2, putative;
n=11; Pezizomycotina|Rep: Splicing factor 3a subunit 2,
putative - Aspergillus clavatus
Length = 272
Score = 90.2 bits (214), Expect = 4e-17
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ---XXXXXXXXXXXXXXXXXXXPEK 425
YF KNH+GS+EC+LCLT+H N+GSYLAHTQG+KHQ P
Sbjct: 79 YFFKNHVGSFECRLCLTVHQNDGSYLAHTQGRKHQTNLARRAAREQREGKNQDPSMLPGA 138
Query: 426 PRIEPKK-FVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRL- 599
++ KK +KIGRPGY++TK DP T + Q + + + +++
Sbjct: 139 MGVQVKKQTIKIGRPGYKITKIRDPLTRQLGLLFQLQYQEITPGVTPRVRFMSAFEQKVE 198
Query: 600 SLQTADGQYXLFAAEPYETIALK 668
+ QY + AAEPY+T K
Sbjct: 199 EPPDKNFQYLVVAAEPYQTCGFK 221
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/44 (77%), Positives = 38/44 (86%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
MD+QNR G K GGGGVAS S +N DRRERLR+LALETIDL+KDP
Sbjct: 35 MDYQNRAGSKFGGGGVASHSATNADRRERLRKLALETIDLDKDP 78
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 515 LLFQVDYPEIAEGVIPRHRFMSAYXQKI-EPPDRRWAVFXICSRAL*NYCFKVPSR 679
LLFQ+ Y EI GV PR RFMSA+ QK+ EPPD+ + + + FK+ +R
Sbjct: 170 LLFQLQYQEITPGVTPRVRFMSAFEQKVEEPPDKNFQYLVVAAEPYQTCGFKLQAR 225
>UniRef50_UPI0000498F7E Cluster: splicing factor 3a subunit 2; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3a
subunit 2 - Entamoeba histolytica HM-1:IMSS
Length = 218
Score = 86.6 bits (205), Expect = 5e-16
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEK-PR 431
YF K H+G+Y+CKLCLT H E +YLAHTQGK+HQ P+
Sbjct: 44 YFYKTHVGTYQCKLCLTTHLTEANYLAHTQGKRHQQNLRARELKEMKMHDVQENNTAIPK 103
Query: 432 IEPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXR-RLSLQ 608
+ + F KIG PG+ +TKQ D T ++ + I L + I L +M ++
Sbjct: 104 VPIRYFEKIGTPGFSITKQIDSTTHQKSLA---ITVNLPDIANGVIPLFKIMGAFEQHVE 160
Query: 609 TADG--QYXLFAAEPYETIALK 668
D QY + AAEPY++IA K
Sbjct: 161 PPDNNYQYLIIAAEPYQSIAFK 182
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +1
Query: 130 FQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
F G K G GG+A+ +E+ R+ERL+QLALE IDL+KDP
Sbjct: 2 FGREHGSKPGSGGLATLAETAAARKERLKQLALERIDLSKDP 43
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +2
Query: 509 QSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPS 676
+SL V+ P+IA GVIP + M A+ Q +EPPD + I + + FK+P+
Sbjct: 130 KSLAITVNLPDIANGVIPLFKIMGAFEQHVEPPDNNYQYLIIAAEPYQSIAFKIPN 185
>UniRef50_Q5CI85 Cluster: F11a10.2 protein; n=3;
Cryptosporidium|Rep: F11a10.2 protein - Cryptosporidium
hominis
Length = 216
Score = 84.6 bits (200), Expect = 2e-15
Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
Y+MKNHLG EC+LC T+H NEGSYL+HTQG+KHQ P+
Sbjct: 45 YYMKNHLGQVECRLCSTIHTNEGSYLSHTQGRKHQ-TNLAYRASKEKNLKAVVKPQAENT 103
Query: 435 EPKK--FVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQ 608
E K +IG+P Y+V+K + TG K Q + + +++
Sbjct: 104 EQAKPRAPRIGQPKYKVSKHREGSTGTNCVYCKFYFQEILEDHVPGYRIMSCWEQKVEKP 163
Query: 609 TADGQYXLFAAEPYETIALK 668
QY AEPY TI ++
Sbjct: 164 NPKYQYLFVGAEPYNTIGIR 183
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
MD++NR G KTG G +AS + +RRERLR+LALE+IDL+KDP
Sbjct: 1 MDYENRGGHKTGSGALASSQDIAIERRERLRRLALESIDLSKDP 44
>UniRef50_Q5APP1 Cluster: Potential splicing factor SF3A subunit
Sap62; n=3; Saccharomycetales|Rep: Potential splicing
factor SF3A subunit Sap62 - Candida albicans (Yeast)
Length = 256
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPR- 431
Y +NHLG ECKLCLT H NE SY++H G+KH +
Sbjct: 46 YVFRNHLGMLECKLCLTTHINESSYISHLGGRKHHLNLERRRILDEKQNKSREHQLSSQN 105
Query: 432 ------IEPKKFVKIGRPGYRVTKQXDPET 503
IE + + KIG+P Y++TK DPET
Sbjct: 106 ILSINNIEKRSWKKIGKPIYKITKVRDPET 135
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQ-LALETIDLNKDP 255
MD+ R K G GG+AS + N ++R+++ L+ +D++ DP
Sbjct: 1 MDYSGRVNSKKGAGGIASNEDINIQTKQRVQELLSTHVLDIDNDP 45
>UniRef50_A3GHS1 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 238
Score = 63.3 bits (147), Expect = 5e-09
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
Y +NHLG EC+LCLT H +E SY++H GKKH+ K +
Sbjct: 46 YVFRNHLGLLECRLCLTTHVSELSYISHLGGKKHRMGLEKRRALDEKYSQNRSLNTKINL 105
Query: 435 -------EPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXR 593
+ + K+G+P Y++TK DPET + + + ++ + +
Sbjct: 106 IVSITNTAKRSWTKVGKPAYKLTKIRDPETFQKGLL---VDIKYPKITVEEPFFRFMSYY 162
Query: 594 RLSLQT--ADGQYXLFAAEPYETI 659
LS T ++ QY + +AEPYE I
Sbjct: 163 ELSEATDPSNLQYLVISAEPYENI 186
Score = 41.5 bits (93), Expect = 0.018
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQ-LALETIDLNKDP 255
MD+ R K G GGVA E+N R+R+++ LA + +DL+ DP
Sbjct: 1 MDYSGRVNSKKGAGGVAGAEETNVHTRQRIKELLATQVLDLDNDP 45
>UniRef50_A2DA83 Cluster: Splicing factor, putative; n=1;
Trichomonas vaginalis G3|Rep: Splicing factor, putative
- Trichomonas vaginalis G3
Length = 219
Score = 62.9 bits (146), Expect = 7e-09
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Frame = +3
Query: 201 AGEITTACTRNNRFKQRSYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXX 380
A + T + Y M+N G ECKLC T H E SYL HT GK HQ
Sbjct: 26 ANRLQTLTGSTVNLENDQYLMRNQNGLLECKLCCTTHKTEASYLNHTYGKTHQRNLERRR 85
Query: 381 XXXXXXXXXXXXPE---KPRIEP-KKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQ 548
+ +++P K +KIG P + V K+ D TG+ + ++
Sbjct: 86 ITLARKEAIAGGIRSGTQVKVDPAKNTLKIGDPSFEVIKKRDITTGNLTILVELGYPDIK 145
Query: 549 RVLYLDIDLCLLMXRRLSLQTADGQYXLFAAEPYETIALK 668
+ + + + + +Y LFAA PY T+ K
Sbjct: 146 KYTSPKYRIMSTYEQTVEPPDPNHKYLLFAAIPYNTVCFK 185
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 512 SLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPS 676
++L ++ YP+I + P++R MS Y Q +EPPD + CFK+P+
Sbjct: 134 TILVELGYPDIKKYTSPKYRIMSTYEQTVEPPDPNHKYLLFAAIPYNTVCFKIPN 188
>UniRef50_A5AVJ0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 427
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/79 (48%), Positives = 42/79 (53%)
Frame = +1
Query: 145 GGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDPIL*KII*GPMNVNFV*PCITMRE 324
G K G GG AS DRRERLR+LALETIDL KDP + G R
Sbjct: 6 GSKPGTGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLG-------------RA 52
Query: 325 VIWLTRKGRSIKPIWHVEL 381
+IW T KGR I+ IW EL
Sbjct: 53 IIWPTHKGRGIRRIWPREL 71
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +2
Query: 509 QSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPS 676
+SLLFQ++YPEI + PRHRFMS++ Q+++ D+R+ + FKVPS
Sbjct: 124 RSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEPYEIIAFKVPS 179
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/73 (42%), Positives = 39/73 (53%)
Frame = +3
Query: 450 VKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTADGQYX 629
+KIGRPGYRVTKQ DPET R+ + ++ + +R+ QY
Sbjct: 104 IKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYL 163
Query: 630 LFAAEPYETIALK 668
LFAAEPYE IA K
Sbjct: 164 LFAAEPYEIIAFK 176
>UniRef50_UPI0000565504 Cluster: UPI0000565504 related cluster; n=1;
Mus musculus|Rep: UPI0000565504 UniRef100 entry - Mus
musculus
Length = 354
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKD 252
M+FQ+ PGGKTG GGVAS S D RERL+QL LETI++NKD
Sbjct: 1 MNFQHPPGGKTGSGGVAS---SKLDWRERLQQLTLETININKD 40
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Frame = +3
Query: 258 FMKNHLGSYE--CKLCLTLHNNEGSYLAHTQGKKHQ 359
FMK + ++ KLCLTLHNNEGSYLAH QG KHQ
Sbjct: 43 FMKKNFMTWNPRSKLCLTLHNNEGSYLAHIQGNKHQ 78
>UniRef50_Q3LVY8 Cluster: MRNA splicing factor 3A subunit 2; n=1;
Bigelowiella natans|Rep: MRNA splicing factor 3A subunit
2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 202
Score = 50.0 bits (114), Expect = 5e-05
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +3
Query: 282 YECKLCLTLHNNEGSYLAHTQGKKH 356
++CKLCLT+H +E SYLAHTQGK+H
Sbjct: 48 FKCKLCLTMHRSESSYLAHTQGKRH 72
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 557 IPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPS 676
+P +R ++ Y Q IE PD + + S CFK+P+
Sbjct: 136 VPDYRILTTYEQSIEKPDNNYQYLLVASPNYVTICFKIPN 175
>UniRef50_Q7R0G4 Cluster: GLP_29_31467_32135; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_29_31467_32135 - Giardia lamblia
ATCC 50803
Length = 222
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
+ KN+LG YECKLC T H ++ SY H GK+HQ
Sbjct: 45 FCFKNYLGKYECKLCGTRHVDKESYAKHVSGKRHQ 79
>UniRef50_Q0TZL0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 218
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 515 LLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
LLFQ +P+I GV+PR RFMSAY Q++E D + + K+ +R
Sbjct: 119 LLFQFQFPDITTGVVPRVRFMSAYEQRVEEADPNYQYLIVAGEPYETVAVKLQAR 173
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +3
Query: 441 KKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTADG 620
K +KIGRPGYR+TK DP + + + + + +R+ +
Sbjct: 94 KNTLKIGRPGYRITKVRDPMSRQNGLLFQFQFPDITTGVVPRVRFMSAYEQRVEEADPNY 153
Query: 621 QYXLFAAEPYETIALK 668
QY + A EPYET+A+K
Sbjct: 154 QYLIVAGEPYETVAVK 169
>UniRef50_Q6E6H6 Cluster: Spliceosome-associated protein 62; n=1;
Antonospora locustae|Rep: Spliceosome-associated protein
62 - Antonospora locustae (Nosema locustae)
Length = 178
Score = 44.0 bits (99), Expect = 0.003
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 356
+F+ N+ G YEC LC TLH S++ H GK+H
Sbjct: 45 HFVTNNSGRYECSLCRTLHTTVQSFILHKSGKRH 78
>UniRef50_Q07350 Cluster: Pre-mRNA-splicing factor PRP11; n=6;
Saccharomycetales|Rep: Pre-mRNA-splicing factor PRP11 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 266
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 228 RNNRFKQRSYFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 356
++++ + Y KNH G CKLC T+H + S H GKKH
Sbjct: 48 KDDQVRSNPYIYKNHSGKLVCKLCNTMHMSWSSVERHLGGKKH 90
>UniRef50_Q8SSB4 Cluster: SPLICEOSOME-ASSOCIATED PROTEIN 62; n=1;
Encephalitozoon cuniculi|Rep: SPLICEOSOME-ASSOCIATED
PROTEIN 62 - Encephalitozoon cuniculi
Length = 185
Score = 38.3 bits (85), Expect = 0.17
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 264 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
++ G Y C LC T H E SY+ H +GKKH+
Sbjct: 44 RDSTGKYVCLLCKTKHLTEMSYVKHREGKKHK 75
>UniRef50_Q4FZ32 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 239
Score = 36.3 bits (80), Expect = 0.69
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 356
YF +NH+G C LC E ++L H GK H
Sbjct: 23 YFKRNHMGQVTCTLCGIYCPEENNFLKHIAGKTH 56
>UniRef50_UPI000065ED29 Cluster: zinc finger, matrin type 4; n=3;
Euteleostomi|Rep: zinc finger, matrin type 4 - Takifugu
rubripes
Length = 230
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 261 MKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
MK SY C++C N+ Y AH QG KHQ
Sbjct: 198 MKGLKRSYSCEVCSVTLNSVAQYHAHLQGSKHQ 230
>UniRef50_Q4DJR6 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 246
Score = 35.1 bits (77), Expect = 1.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 356
Y+ +NH+G C LC ++ ++L H GK H
Sbjct: 18 YYKRNHMGRVTCTLCDVCCTDDNNFLKHIAGKTH 51
>UniRef50_Q29R03 Cluster: LD02865p; n=5; Drosophila
melanogaster|Rep: LD02865p - Drosophila melanogaster
(Fruit fly)
Length = 751
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 201 AGEITTACTRNNRF---KQR--SYFMKNHLGSYECKLCLTLHNNEGSYLAH 338
A E T +C R +F +QR S+ K H +C LC ++ N+ Y+AH
Sbjct: 666 ADESTLSCDRCGKFVKSRQRLDSHMEKKHAAKLQCTLCKEVYQNQMDYVAH 716
>UniRef50_UPI00015554D6 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 466
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 264 KNHL-GSYECKLCLTLHNNEGSYLAHTQGKKH 356
KNHL S +CK+C L +E LAH Q KKH
Sbjct: 267 KNHLFTSTQCKVCSALLISESQKLAHYQSKKH 298
>UniRef50_Q4SKX5 Cluster: Chromosome 17 SCAF14563, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
SCAF14563, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 282
Score = 33.1 bits (72), Expect = 6.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 279 SYECKLCLTLHNNEGSYLAHTQGKKHQ 359
SY C +C + N+ Y AH QG KHQ
Sbjct: 256 SYSCSICNVVLNSIEQYHAHLQGSKHQ 282
>UniRef50_Q4U9S8 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 261
Score = 32.7 bits (71), Expect = 8.4
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 264 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKH 356
K+ G + CK C L + SYL H GKKH
Sbjct: 90 KSKQGGFFCKTCNCLLKDSQSYLDHLNGKKH 120
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,126,396
Number of Sequences: 1657284
Number of extensions: 9954562
Number of successful extensions: 22350
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 21471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22312
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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