Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060083.seq
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 138 2e-32
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 138 2e-32
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 138 2e-32
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 138 2e-32
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 138 2e-32
BC056668-1|AAH56668.1| 199|Homo sapiens zinc finger, matrin typ... 31 5.0
AK055683-1|BAB70983.1| 199|Homo sapiens protein ( Homo sapiens ... 31 5.0
BC007775-1|AAH07775.1| 294|Homo sapiens zinc finger protein 346... 30 8.7
AK131469-1|BAD18614.1| 319|Homo sapiens protein ( Homo sapiens ... 30 8.7
AF083340-1|AAD52018.1| 294|Homo sapiens double-stranded RNA-bin... 30 8.7
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 138 bits (334), Expect = 2e-32
Identities = 71/138 (51%), Positives = 81/138 (58%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ PEK ++
Sbjct: 45 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKV 104
Query: 435 EPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTA 614
E KKFVKIGRPGY+VTKQ D E G ++ + + + +R+
Sbjct: 105 EVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDR 164
Query: 615 DGQYXLFAAEPYETIALK 668
QY L AAEPYETIA K
Sbjct: 165 RWQYLLMAAEPYETIAFK 182
Score = 88.2 bits (209), Expect = 2e-17
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +2
Query: 509 QSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
QSLLFQ+DYPEIAEG++PRHRFMSAY Q+IEPPDRRW + + FKVPSR
Sbjct: 130 QSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSR 186
Score = 84.2 bits (199), Expect = 4e-16
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
MDFQ+RPGGKTG GGVAS SESNRDRRE LRQLALETID+NKDP
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRREPLRQLALETIDINKDP 44
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 138 bits (334), Expect = 2e-32
Identities = 71/138 (51%), Positives = 81/138 (58%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ PEK ++
Sbjct: 45 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKV 104
Query: 435 EPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTA 614
E KKFVKIGRPGY+VTKQ D E G ++ + + + +R+
Sbjct: 105 EVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDR 164
Query: 615 DGQYXLFAAEPYETIALK 668
QY L AAEPYETIA K
Sbjct: 165 RWQYLLMAAEPYETIAFK 182
Score = 88.2 bits (209), Expect = 2e-17
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +2
Query: 509 QSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
QSLLFQ+DYPEIAEG++PRHRFMSAY Q+IEPPDRRW + + FKVPSR
Sbjct: 130 QSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSR 186
Score = 87.0 bits (206), Expect = 5e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
MDFQ+RPGGKTG GGVAS SESNRDRRERLRQLALETID+NKDP
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDP 44
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 138 bits (334), Expect = 2e-32
Identities = 71/138 (51%), Positives = 81/138 (58%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ PEK ++
Sbjct: 45 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKV 104
Query: 435 EPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTA 614
E KKFVKIGRPGY+VTKQ D E G ++ + + + +R+
Sbjct: 105 EVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDR 164
Query: 615 DGQYXLFAAEPYETIALK 668
QY L AAEPYETIA K
Sbjct: 165 RWQYLLMAAEPYETIAFK 182
Score = 88.2 bits (209), Expect = 2e-17
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +2
Query: 509 QSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
QSLLFQ+DYPEIAEG++PRHRFMSAY Q+IEPPDRRW + + FKVPSR
Sbjct: 130 QSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSR 186
Score = 87.0 bits (206), Expect = 5e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
MDFQ+RPGGKTG GGVAS SESNRDRRERLRQLALETID+NKDP
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDP 44
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 138 bits (334), Expect = 2e-32
Identities = 71/138 (51%), Positives = 81/138 (58%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ PEK ++
Sbjct: 45 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKV 104
Query: 435 EPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTA 614
E KKFVKIGRPGY+VTKQ D E G ++ + + + +R+
Sbjct: 105 EVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDR 164
Query: 615 DGQYXLFAAEPYETIALK 668
QY L AAEPYETIA K
Sbjct: 165 RWQYLLMAAEPYETIAFK 182
Score = 88.2 bits (209), Expect = 2e-17
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +2
Query: 509 QSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
QSLLFQ+DYPEIAEG++PRHRFMSAY Q+IEPPDRRW + + FKVPSR
Sbjct: 130 QSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSR 186
Score = 87.0 bits (206), Expect = 5e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
MDFQ+RPGGKTG GGVAS SESNRDRRERLRQLALETID+NKDP
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDP 44
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 138 bits (334), Expect = 2e-32
Identities = 71/138 (51%), Positives = 81/138 (58%)
Frame = +3
Query: 255 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQXXXXXXXXXXXXXXXXXXXPEKPRI 434
YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ PEK ++
Sbjct: 45 YFMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKV 104
Query: 435 EPKKFVKIGRPGYRVTKQXDPETGHRACSSK*IIQRLQRVLYLDIDLCLLMXRRLSLQTA 614
E KKFVKIGRPGY+VTKQ D E G ++ + + + +R+
Sbjct: 105 EVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDR 164
Query: 615 DGQYXLFAAEPYETIALK 668
QY L AAEPYETIA K
Sbjct: 165 RWQYLLMAAEPYETIAFK 182
Score = 88.2 bits (209), Expect = 2e-17
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +2
Query: 509 QSLLFQVDYPEIAEGVIPRHRFMSAYXQKIEPPDRRWAVFXICSRAL*NYCFKVPSR 679
QSLLFQ+DYPEIAEG++PRHRFMSAY Q+IEPPDRRW + + FKVPSR
Sbjct: 130 QSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSR 186
Score = 87.0 bits (206), Expect = 5e-17
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +1
Query: 124 MDFQNRPGGKTGGGGVASWSESNRDRRERLRQLALETIDLNKDP 255
MDFQ+RPGGKTG GGVAS SESNRDRRERLRQLALETID+NKDP
Sbjct: 1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDP 44
>BC056668-1|AAH56668.1| 199|Homo sapiens zinc finger, matrin type 2
protein.
Length = 199
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 264 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
++ +G Y C +C + + ++L H GKKHQ
Sbjct: 74 QSEMGGYYCNVCDCVVKDSINFLDHINGKKHQ 105
>AK055683-1|BAB70983.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ31121 fis, clone IMR322000742, weakly similar to
HYPOTHETICAL ZINC FINGER PROTEIN ZK686.4 IN CHROMOSOME
III. ).
Length = 199
Score = 30.7 bits (66), Expect = 5.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 264 KNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQ 359
++ +G Y C +C + + ++L H GKKHQ
Sbjct: 74 QSEMGGYYCNVCDCVVKDSINFLDHINGKKHQ 105
>BC007775-1|AAH07775.1| 294|Homo sapiens zinc finger protein 346
protein.
Length = 294
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 285 ECKLCLTLHNNEGSYLAHTQGKKH 356
+CK+C L +E LAH Q KKH
Sbjct: 74 QCKVCCALLISESQKLAHYQSKKH 97
>AK131469-1|BAD18614.1| 319|Homo sapiens protein ( Homo sapiens
cDNA FLJ16637 fis, clone TESTI4025547, highly similar
to Homo sapiens double-stranded RNA-binding zinc finger
protein JAZ (JAZ). ).
Length = 319
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 285 ECKLCLTLHNNEGSYLAHTQGKKH 356
+CK+C L +E LAH Q KKH
Sbjct: 99 QCKVCCALLISESQKLAHYQSKKH 122
>AF083340-1|AAD52018.1| 294|Homo sapiens double-stranded
RNA-binding zinc finger protein JAZ protein.
Length = 294
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 285 ECKLCLTLHNNEGSYLAHTQGKKH 356
+CK+C L +E LAH Q KKH
Sbjct: 74 QCKVCCALLISESQKLAHYQSKKH 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,838,759
Number of Sequences: 237096
Number of extensions: 1544236
Number of successful extensions: 2869
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2856
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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